BDGP Sequence Production Resources |
Search the DGRC for RE36241
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 362 |
Well: | 41 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11454-RA |
Protein status: | RE36241.pep: |
Sequenced Size: | 865 |
Gene | Date | Evidence |
---|---|---|
CG11454 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11454 | 2008-04-29 | Release 5.5 accounting |
CG11454 | 2008-08-15 | Release 5.9 accounting |
CG11454 | 2008-12-18 | 5.12 accounting |
865 bp (865 high quality bases) assembled on 2004-08-14
GenBank Submission: BT021281
> RE36241.complete AAAGGGACTTGCAGTTACTAATGCAGCAAATGTATAGTGGTGCGTCGGTC ATGACGATTTCGGAAACGAACATAGATGGTTACAGATACGGTATTCCATC TGGCCAGCACCAAGAGCAGCCAATTTACCCTTTCCTGCCCAATGAAAACG GTGACCAGTTGGTTGGGCAACTGGAGGACGACGACGATGAGGAGGAGGAC GAGGAGCAACGGACTCTGTTCTGCGGGAATCTCGACGAGCGCGTGACGGA GGAGATCCTTTACGAGGTGTTCCTGCAAGCTGGCCCCATCGAAGGAGTGC GGATACCGACCGATAACAATGGGCGTCCCCGGAATTTCGGGTTTGTCACA TACCAACGCCTGTGTGCGGTGCCTTTTGCCCTAGACTTGTACCAGGGCCT TGAACTGTTCCAAAAGAAAGTCACCATCAAGCAGCAGGGCGGCAAGCAGC TACCTGCCTACAACCAAAGTCGTCTGCGCAATCAGTTCATGATGGAGGCT CTACCGCAGCCATCGCCACTGCGTCACGCCCGACACAGTTTGCATAACGG CAAGCCGTACGATCGCAATCCTTTTGGACACAACGCCGATCAACGGCGCC GGAGCGACAGCTCCGTAATGGAACGCAACCGGCTAAAACCACAGCAACAC CACCAGCACATGCAGGGAGGCAGCAGAAGATCGGACCAACGCTCCAACAA CAAACGCAGATTGCTTTAAGATTTCACCACATTTTCGTCTTTATGTATAC CCTAGTCCTTCAGTTACTCAAAACCAAAATCAAAAGTTACCGTCTTTAAT CGTTTAATGAGCTGGATATCTGCAGAAAATTATGTATCAAATGAAGCAGT TTAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 143413..144264 | 1..852 | 4245 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 143376..144228 | 1..853 | 4250 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 143376..144228 | 1..853 | 4250 | 99.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 143413..144264 | 1..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11454-RA | 1..717 | 3..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11454-RA | 1..717 | 3..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11454-RA | 1..717 | 3..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11454-RA | 1..717 | 3..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11454-RA | 1..717 | 3..719 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11454-RA | 1..852 | 1..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11454-RA | 68..919 | 1..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11454-RA | 54..905 | 1..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11454-RA | 1..852 | 1..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11454-RA | 54..905 | 1..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 143376..144227 | 1..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 143376..144227 | 1..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 143376..144227 | 1..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 143376..144227 | 1..852 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 143376..144227 | 1..852 | 99 | Plus |
Translation from 2 to 718
> RE36241.pep RDLQLLMQQMYSGASVMTISETNIDGYRYGIPSGQHQEQPIYPFLPNENG DQLVGQLEDDDDEEEDEEQRTLFCGNLDERVTEEILYEVFLQAGPIEGVR IPTDNNGRPRNFGFVTYQRLCAVPFALDLYQGLELFQKKVTIKQQGGKQL PAYNQSRLRNQFMMEALPQPSPLRHARHSLHNGKPYDRNPFGHNADQRRR SDSSVMERNRLKPQQHHQHMQGGSRRSDQRSNNKRRLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14865-PA | 241 | GF14865-PA | 2..241 | 2..237 | 618 | 59.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24699-PA | 238 | GG24699-PA | 2..238 | 2..238 | 1009 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10062-PA | 251 | GH10062-PA | 76..251 | 70..238 | 467 | 60.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11454-PA | 238 | CG11454-PA | 2..238 | 2..238 | 1261 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16471-PA | 252 | GI16471-PA | 40..252 | 26..238 | 459 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13956-PA | 238 | GL13956-PA | 2..238 | 2..238 | 579 | 58.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11013-PA | 238 | GA11013-PA | 2..238 | 2..238 | 583 | 59.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16717-PA | 237 | GM16717-PA | 2..237 | 2..238 | 1083 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23003-PA | 238 | GD23003-PA | 2..238 | 2..238 | 1081 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16219-PA | 249 | GJ16219-PA | 72..249 | 68..238 | 463 | 58 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24608-PA | 255 | GK24608-PA | 79..255 | 70..237 | 467 | 59.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16604-PA | 240 | GE16604-PA | 2..240 | 2..238 | 967 | 83.7 | Plus |
Translation from 2 to 718
> RE36241.hyp MDLQLLMQQMYSGASVMTISETNIDGYRYGIPSGQHQEQPIYPFLPNENG DQLVGQLEDDDDEEEDEEQRTLFCGNLDERVTEEILYEVFLQAGPIEGVR IPTDNNGRPRNFGFVTYQRLCAVPFALDLYQGLELFQKKVTIKQQGGKQL PAYNQSRLRNQFMMEALPQPSPLRHARHSLHNGKPYDRNPFGHNADQRRR SDSSVMERNRLKPQQHHQHMQGGSRRSDQRSNNKRRLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11454-PA | 238 | CG11454-PA | 1..238 | 1..238 | 1266 | 100 | Plus |