BDGP Sequence Production Resources |
Search the DGRC for RE36324
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 363 |
Well: | 24 |
Vector: | pFlc-1 |
Associated Gene/Transcript | rhi-RA |
Protein status: | RE36324.pep: gold |
Preliminary Size: | 1257 |
Sequenced Size: | 1583 |
Gene | Date | Evidence |
---|---|---|
CG10683 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10683 | 2002-03-28 | Blastp of sequenced clone |
CG10683 | 2003-01-01 | Sim4 clustering to Release 3 |
rhi | 2008-04-29 | Release 5.5 accounting |
rhi | 2008-08-15 | Release 5.9 accounting |
rhi | 2008-12-18 | 5.12 accounting |
1583 bp (1583 high quality bases) assembled on 2002-03-28
GenBank Submission: AY094869
> RE36324.complete CTTTTTTTTTGCTCGGCGTCCTGTGAGCGGATAAGTTATGTCTCGCAACC ATCAGCGACCAAATCTTGGTCTGGTCGATGCACCGCCTAATGATCATGTC GAAGAATATGTAGTGGAGAAAATCTTAGGCAAACGGTTTGTTAATGGGCG TCCCCAGGTTCTGGTGAAGTGGAGCGGTTTTCCGAACGAGAACAACACCT GGGAACCATTGGAAAACGTAGGCAACTGCATGAAGCTGGTCTCCGACTTC GAGTCGGAGGTCTTCAGGCTGCATCGGAAGGCCGCGGCTAAATCTGTCGG GAAATCGAAGTCAAGTCCTAGCAGCAGCGGTCCATTGATCACCGAGAATG GCCCCAGCAGCTCTAAGAAAACACAACAACATTCCAAGTCGGTGCAGGCA AAAAACACAGCTGGAATGTCGAAGATGAATCAGAAAAAAGGAAAGAATAT TAAGAAAACGGCGGGAAAAATCAAAGATATTGAAAATTATCCCAAAACTC AGATGCCTAGTACTAGCCAAGTCTCCACAGATTCAACTGAAGTTTTCGAC GGCAATCCATCAGCCACAACGACGAACATGATTAAGAGTCCCAGGATTCA AAGCCTTTTCAGTGATCTGAACTTGATCGAACCCACTAAAGACAAAGATG TGGGGGACACATCTTTAAAAACGCCTCCCAAATCGCGCCGGCTTATTGAA TTTCCTCAACGGGAAGACGCACCATTGTCTTCGAAACATGTGTCTCCTAT GCTGATTCGTAAAGAATCCCAACCATTGCAGAGCTCATGTACTGATGATT CGGATTTGGGTGAATCCTCTTCCAGTATGTCGCTTCCTACAGTATCATCG ACCAGCTCTGAGAAATCGATCAAGGTCACCAAATCGGAACCTAAAACGCT CGGCCAGATAAAGTTTTCGTCTAGGTCATCCGATGGTGGTCATGCGGCTT CATCGCTGGGCGCACCAAAAGAAGGGGACATTGGCTTGGATTTATCTGGC AGTGATTCCATGGATTCCGAAGTGGAGAGCATGCGCCGCTGTCCGCGCCG CAAGCGTAAAAAAACTTACCCGGATTGGAAATTCCCGGAGATGACGAAAC CCTTCGGTGTGAATCGCGGACTGGATCTGGATAAAATTCTCCACTGCTAC CAGATGAATGACGATCTATTCATGTTTGTCACGTGGAAGGGCTGCTCGTC CATCGATGCAGTGCATATTAATGACATTAAGGAAGCGTATCCATTGCAGA TAATTAAGTACTTCGAGAGCTTGAGGATCATTGTGCCCAAGTAAAGATGC CTAGTACCGGGTTTGTACAACGTTTTGGCCAAAAAGAAAAATTCACATCA CACAACATAATCGACTCCAAGTTCAAGGTCATCGCATCTAAGCTGGGTAA ACTCCAGCTGACCCATCAAATTGATCTATTCAAAGGAAAAACACCGAGTT GTGTTTATACTATGTTTTATGTTTTCTCCGTACATGTTGAAAAATGTACA TATCAATGGTTTCAAGTAACCTGATATACTAACCTTTTTCCCCAATAAAT TTTGTTTTTGGCCTGGCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rhi-RA | 1663 | rhi-RA | 65..1627 | 7..1569 | 7800 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13519583..13520606 | 1030..7 | 5120 | 100 | Minus |
chr2R | 21145070 | chr2R | 13519051..13519332 | 1312..1031 | 1410 | 100 | Minus |
chr2R | 21145070 | chr2R | 13515593..13515848 | 1565..1310 | 1280 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17632484..17633507 | 1030..7 | 5120 | 100 | Minus |
2R | 25286936 | 2R | 17631952..17632233 | 1312..1031 | 1410 | 100 | Minus |
2R | 25286936 | 2R | 17628489..17628748 | 1569..1310 | 1285 | 99.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17633683..17634706 | 1030..7 | 5120 | 100 | Minus |
2R | 25260384 | 2R | 17633151..17633432 | 1312..1031 | 1410 | 100 | Minus |
2R | 25260384 | 2R | 17629688..17629947 | 1569..1310 | 1285 | 99.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13515591..13515839 | 1319..1567 | 99 | -> | Minus |
chr2R | 13519042..13519332 | 1031..1318 | 98 | <- | Minus |
chr2R | 13519583..13520611 | 1..1030 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rhi-RA | 1..1257 | 38..1294 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rhi-RA | 1..1257 | 38..1294 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rhi-RA | 1..1257 | 38..1294 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rhi-RA | 1..1257 | 38..1294 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rhi-RA | 1..1257 | 38..1294 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rhi-RA | 1..1567 | 1..1567 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rhi-RA | 1..1567 | 1..1567 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rhi-RA | 4..1570 | 1..1567 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rhi-RA | 1..1567 | 1..1567 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rhi-RA | 4..1570 | 1..1567 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17628491..17628747 | 1311..1567 | 99 | <- | Minus |
2R | 17631954..17632233 | 1031..1310 | 100 | <- | Minus |
2R | 17632484..17633512 | 1..1030 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17628491..17628747 | 1311..1567 | 99 | <- | Minus |
2R | 17631954..17632233 | 1031..1310 | 100 | <- | Minus |
2R | 17632484..17633512 | 1..1030 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17628491..17628747 | 1311..1567 | 99 | <- | Minus |
2R | 17631954..17632233 | 1031..1310 | 100 | <- | Minus |
2R | 17632484..17633512 | 1..1030 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13519459..13519738 | 1031..1310 | 100 | <- | Minus |
arm_2R | 13515996..13516252 | 1311..1567 | 99 | <- | Minus |
arm_2R | 13519989..13521017 | 1..1030 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17629690..17629946 | 1311..1567 | 99 | <- | Minus |
2R | 17633153..17633432 | 1031..1310 | 100 | <- | Minus |
2R | 17633683..17634711 | 1..1030 | 99 | Minus |
Translation from 37 to 1293
> RE36324.pep MSRNHQRPNLGLVDAPPNDHVEEYVVEKILGKRFVNGRPQVLVKWSGFPN ENNTWEPLENVGNCMKLVSDFESEVFRLHRKAAAKSVGKSKSSPSSSGPL ITENGPSSSKKTQQHSKSVQAKNTAGMSKMNQKKGKNIKKTAGKIKDIEN YPKTQMPSTSQVSTDSTEVFDGNPSATTTNMIKSPRIQSLFSDLNLIEPT KDKDVGDTSLKTPPKSRRLIEFPQREDAPLSSKHVSPMLIRKESQPLQSS CTDDSDLGESSSSMSLPTVSSTSSEKSIKVTKSEPKTLGQIKFSSRSSDG GHAASSLGAPKEGDIGLDLSGSDSMDSEVESMRRCPRRKRKKTYPDWKFP EMTKPFGVNRGLDLDKILHCYQMNDDLFMFVTWKGCSSIDAVHINDIKEA YPLQIIKYFESLRIIVPK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\rhi-PA | 395 | GF13238-PA | 19..79 | 23..90 | 235 | 58.8 | Plus |
Dana\GF19833-PA | 78 | GF19833-PA | 17..70 | 23..76 | 211 | 66.7 | Plus |
Dana\GF13239-PA | 73 | GF13239-PA | 10..68 | 356..414 | 183 | 49.2 | Plus |
Dana\GF19189-PA | 227 | GF19189-PA | 3..73 | 23..96 | 147 | 41.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21036-PA | 1817 | GG21036-PA | 1..326 | 1..306 | 701 | 52.3 | Plus |
Dere\GG21035-PA | 84 | GG21035-PA | 17..75 | 19..77 | 209 | 55.9 | Plus |
Dere\GG18261-PA | 132 | GG18261-PA | 23..83 | 17..77 | 185 | 54.1 | Plus |
Dere\GG18283-PA | 238 | GG18283-PA | 3..73 | 23..96 | 148 | 41.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rhi-PA | 418 | CG10683-PA | 1..418 | 1..418 | 2166 | 100 | Plus |
Oxp-PA | 84 | CG18186-PA | 7..79 | 9..81 | 215 | 52.1 | Plus |
Su(var)205-PB | 206 | CG8409-PB | 1..121 | 1..126 | 163 | 33.1 | Plus |
Su(var)205-PA | 206 | CG8409-PA | 1..121 | 1..126 | 163 | 33.1 | Plus |
HP1b-PB | 240 | CG7041-PB | 3..106 | 23..126 | 151 | 33 | Plus |
HP1b-PC | 240 | CG7041-PC | 3..106 | 23..126 | 151 | 33 | Plus |
HP1b-PA | 240 | CG7041-PA | 3..106 | 23..126 | 151 | 33 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20781-PA | 353 | GI20781-PA | 34..87 | 24..76 | 185 | 50 | Plus |
Dmoj\GI20276-PA | 180 | GI20276-PA | 3..130 | 23..148 | 161 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17684-PA | 238 | GL17684-PA | 22..75 | 23..76 | 188 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\HP1Da-PA | 317 | GA14831-PA | 22..75 | 23..76 | 186 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13712-PA | 240 | GM13712-PA | 3..73 | 23..96 | 148 | 41.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\rhi-PA | 789 | GD25457-PA | 1..307 | 1..293 | 1025 | 74.8 | Plus |
Dsim\GD16106-PA | 252 | GD16106-PA | 177..244 | 345..412 | 216 | 50 | Plus |
Dsim\GD25456-PA | 84 | GD25456-PA | 7..79 | 9..81 | 214 | 52.1 | Plus |
Dsim\GD16106-PA | 252 | GD16106-PA | 2..128 | 3..137 | 185 | 34.8 | Plus |
Dsim\GD16926-PA | 240 | GD16926-PA | 3..73 | 23..96 | 147 | 41.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20517-PA | 645 | GJ20517-PA | 46..134 | 24..104 | 198 | 43.8 | Plus |
Dvir\GJ20517-PA | 645 | GJ20517-PA | 579..643 | 353..417 | 158 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10664-PA | 410 | GK10664-PA | 44..105 | 23..84 | 229 | 59.7 | Plus |
Dwil\GK19580-PA | 89 | GK19580-PA | 29..83 | 26..80 | 164 | 50.9 | Plus |
Dwil\GK10664-PA | 410 | GK10664-PA | 299..374 | 339..413 | 160 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\rhi-PA | 1702 | GE13979-PA | 1..236 | 1..231 | 636 | 55.9 | Plus |
Dyak\GE17442-PA | 291 | GE17442-PA | 118..278 | 256..415 | 261 | 35.1 | Plus |
Dyak\GE13978-PA | 84 | GE13978-PA | 17..75 | 19..77 | 215 | 55.9 | Plus |
Dyak\GE17442-PA | 291 | GE17442-PA | 21..83 | 23..84 | 213 | 61.9 | Plus |
Dyak\GE15815-PA | 240 | GE15815-PA | 3..73 | 23..96 | 148 | 41.9 | Plus |
Translation from 37 to 1293
> RE36324.hyp MSRNHQRPNLGLVDAPPNDHVEEYVVEKILGKRFVNGRPQVLVKWSGFPN ENNTWEPLENVGNCMKLVSDFESEVFRLHRKAAAKSVGKSKSSPSSSGPL ITENGPSSSKKTQQHSKSVQAKNTAGMSKMNQKKGKNIKKTAGKIKDIEN YPKTQMPSTSQVSTDSTEVFDGNPSATTTNMIKSPRIQSLFSDLNLIEPT KDKDVGDTSLKTPPKSRRLIEFPQREDAPLSSKHVSPMLIRKESQPLQSS CTDDSDLGESSSSMSLPTVSSTSSEKSIKVTKSEPKTLGQIKFSSRSSDG GHAASSLGAPKEGDIGLDLSGSDSMDSEVESMRRCPRRKRKKTYPDWKFP EMTKPFGVNRGLDLDKILHCYQMNDDLFMFVTWKGCSSIDAVHINDIKEA YPLQIIKYFESLRIIVPK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rhi-PA | 418 | CG10683-PA | 1..418 | 1..418 | 2166 | 100 | Plus |
Oxp-PA | 84 | CG18186-PA | 7..79 | 9..81 | 215 | 52.1 | Plus |
Su(var)205-PB | 206 | CG8409-PB | 1..121 | 1..126 | 163 | 33.1 | Plus |
Su(var)205-PA | 206 | CG8409-PA | 1..121 | 1..126 | 163 | 33.1 | Plus |
HP1b-PB | 240 | CG7041-PB | 3..106 | 23..126 | 151 | 33 | Plus |