BDGP Sequence Production Resources |
Search the DGRC for RE36486
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 364 |
Well: | 86 |
Vector: | pFlc-1 |
Associated Gene/Transcript | ATPsyn-b-RA |
Protein status: | RE36486.pep: gold |
Sequenced Size: | 956 |
Gene | Date | Evidence |
---|---|---|
CG8189 | 2004-01-14 | Blastp of sequenced clone |
ATPsyn-b | 2008-04-29 | Release 5.5 accounting |
ATPsyn-b | 2008-08-15 | Release 5.9 accounting |
ATPsyn-b | 2008-12-18 | 5.12 accounting |
956 bp (956 high quality bases) assembled on 2004-01-14
GenBank Submission: BT011453
> RE36486.complete GATCTGGCAACGCTCTCTTAACCTGTCACTATTGTGAACTGACAATTTCG GGTGAATTTAGTAGCATAAATTCGTCGCAACTGCCTGGAAAATGTTCTCG AGAGCCGCTCTTCTAACAGCCCAGCGCCCCTTGACCGTGGCCGCCACCCG GTCGGCAGCCGCTGCTGCCGCTCCTGGCGGAGCCATCGAGCGCCGCCAGC GCCCCGAGCATCCCGGCAAGGTCCGTCTGGGATTCCTGCCCGAGGAGTGG TTCCAGTTCTTCTACAACAAGACCGGTGTCACCGGACCCTACACCTTCGG CGTGGGTCTGATCACCTATCTCTGCTCCAAGGAGATCTACGTCATGGAGC ACGAGTACTACAGCGGTCTGTCGCTCGGTATCATGGCCATCATTGCTGTC AAGAAGCTCGGCCCGGTCATCGCCAAGTGGGCTGATGGCGAGATCGATAA AATCGAATCTGAGTGGAAGGAGGGACGCGAGGCTGAGCTGAAGGTCCTCT CCGACGCCATCGAGGCCGAGAAGAAGGAGCAGTGGCGCGCCGACGGTGCC CTGCTGCTGATGGAAGCCAAGAAGGAGAACATTGCATTGCAGCTGGAGGC CGCGTTCCGTGAGCGCGCCATGAATGTGTACTCGGAGGTGAAGCGTCGTC TCGACTACCAGGTGGAGTGCCGCCACGTCGAGCGTCGCCTTAGCCAGAAG CACATGGTCAACTGGATCACCACCAATGTGTTGGCCAGCATCTCTCCCCA GCAGGAGAAGGAGACTCTCAACAAGTGCATCGCCGATCTGAGCGCTCTGG CACTGCGCGTCAAGTCTGCCTAAACGATTCGAGTTTTAGTTGTTTATTTG TAAATTAAAACCCATTCGAGACGCTGGAACCATGAATATGCCCGAAAGAT GATAAATCGATCCAATATATCTTCAAAATGTCCGTGTCTGAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ATPsyn-b.a | 1075 | ATPsyn-b.a | 124..1067 | 1..944 | 4720 | 100 | Plus |
ATPsyn-b-RA | 994 | ATPsyn-b-RA | 43..986 | 1..944 | 4720 | 100 | Plus |
ATPsyn-b-RB | 1165 | ATPsyn-b-RB | 333..1160 | 117..944 | 4140 | 100 | Plus |
ATPsyn-b-RB | 1165 | ATPsyn-b-RB | 1..119 | 1..119 | 595 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9722587..9723078 | 449..940 | 2460 | 100 | Plus |
chr3L | 24539361 | chr3L | 9722163..9722494 | 117..448 | 1660 | 100 | Plus |
chr3L | 24539361 | chr3L | 9721831..9721949 | 1..119 | 595 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9721831..9721949 | 1..119 | 100 | -> | Plus |
chr3L | 9722166..9722494 | 120..448 | 100 | -> | Plus |
chr3L | 9722587..9723078 | 449..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-b-RA | 1..732 | 92..823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-b-RA | 1..732 | 92..823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-b-RA | 1..732 | 92..823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-b-RA | 1..732 | 92..823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-b-RA | 1..732 | 92..823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-b-RA | 1..940 | 1..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-b-RA | 1..940 | 1..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-b-RA | 1..918 | 23..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-b-RA | 1..940 | 1..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ATPsyn-b-RA | 1..918 | 23..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9729977..9730095 | 1..119 | 100 | -> | Plus |
3L | 9730312..9730640 | 120..448 | 100 | -> | Plus |
3L | 9730733..9731224 | 449..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9729977..9730095 | 1..119 | 100 | -> | Plus |
3L | 9730312..9730640 | 120..448 | 100 | -> | Plus |
3L | 9730733..9731224 | 449..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9729977..9730095 | 1..119 | 100 | -> | Plus |
3L | 9730312..9730640 | 120..448 | 100 | -> | Plus |
3L | 9730733..9731224 | 449..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9723077..9723195 | 1..119 | 100 | -> | Plus |
arm_3L | 9723412..9723740 | 120..448 | 100 | -> | Plus |
arm_3L | 9723833..9724324 | 449..940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9723412..9723740 | 120..448 | 100 | -> | Plus |
3L | 9723833..9724324 | 449..940 | 100 | Plus | |
3L | 9723077..9723195 | 1..119 | 100 | -> | Plus |
Translation from 91 to 822
> RE36486.pep MFSRAALLTAQRPLTVAATRSAAAAAAPGGAIERRQRPEHPGKVRLGFLP EEWFQFFYNKTGVTGPYTFGVGLITYLCSKEIYVMEHEYYSGLSLGIMAI IAVKKLGPVIAKWADGEIDKIESEWKEGREAELKVLSDAIEAEKKEQWRA DGALLLMEAKKENIALQLEAAFRERAMNVYSEVKRRLDYQVECRHVERRL SQKHMVNWITTNVLASISPQQEKETLNKCIADLSALALRVKSA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24674-PA | 245 | GF24674-PA | 1..245 | 1..243 | 1251 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15409-PA | 243 | GG15409-PA | 1..243 | 1..243 | 1275 | 98.4 | Plus |
Dere\GG13783-PA | 151 | GG13783-PA | 1..142 | 1..146 | 254 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15429-PA | 246 | GH15429-PA | 1..245 | 1..242 | 1122 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ATPsynB-PA | 243 | CG8189-PA | 1..243 | 1..243 | 1237 | 100 | Plus |
CG17300-PA | 152 | CG17300-PA | 1..133 | 1..137 | 245 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13031-PA | 245 | GI13031-PA | 1..245 | 1..243 | 1116 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16292-PA | 245 | GL16292-PA | 1..245 | 1..243 | 1163 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20881-PA | 245 | GA20881-PA | 1..245 | 1..243 | 1163 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25183-PA | 243 | GM25183-PA | 1..243 | 1..243 | 1284 | 99.6 | Plus |
Dsec\GM24609-PA | 152 | GM24609-PA | 1..133 | 1..137 | 273 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14214-PA | 243 | GD14214-PA | 1..243 | 1..243 | 1284 | 99.6 | Plus |
Dsim\GD12675-PA | 141 | GD12675-PA | 1..122 | 16..137 | 226 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12126-PA | 246 | GJ12126-PA | 1..243 | 1..241 | 1125 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10957-PA | 243 | GK10957-PA | 1..243 | 1..243 | 1139 | 93 | Plus |
Translation from 91 to 822
> RE36486.hyp MFSRAALLTAQRPLTVAATRSAAAAAAPGGAIERRQRPEHPGKVRLGFLP EEWFQFFYNKTGVTGPYTFGVGLITYLCSKEIYVMEHEYYSGLSLGIMAI IAVKKLGPVIAKWADGEIDKIESEWKEGREAELKVLSDAIEAEKKEQWRA DGALLLMEAKKENIALQLEAAFRERAMNVYSEVKRRLDYQVECRHVERRL SQKHMVNWITTNVLASISPQQEKETLNKCIADLSALALRVKSA*