BDGP Sequence Production Resources |
Search the DGRC for RE36623
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 366 |
Well: | 23 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Yeti-RA |
Protein status: | RE36623.pep: gold |
Sequenced Size: | 917 |
Gene | Date | Evidence |
---|---|---|
CG17866 | 2002-01-01 | Sim4 clustering to Release 2 |
CG40218 | 2002-02-22 | Blastp of sequenced clone |
CG40218 | 2003-01-01 | Sim4 clustering to Release 3 |
Yeti | 2008-08-15 | Release 5.9 accounting |
Yeti | 2008-12-18 | 5.12 accounting |
917 bp (917 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089623
> RE36623.complete ATATTTTTTTTGGTTATGAGGAACAGACACAATGAACTCACAAAAAGAAT ACGTATCGGACTGCGAAACCGACGATGATTATTATGTCGATTTGTTAACT TCAGGCAAGGGCAGTGATAAGAGTGAAAGTGATGTGTCGGACAAGTCTGA AAATTATCCAGGCCTAAAATCAAAGCATACTGCGAAGGCATTGCGGAAAA CAAGGCATTGTGACGGCGATAATAGGGAATACAGGTCTAAGGAGTGCGAC GACCTTCATTCCGAAGAGGAGTCTGAAAAATCGCGGTCGGATGCTTTATG GGCCGATTTTCTTGGCGACATTGATACTAAAAGCGTAATCAACCAAAAAA CAGATTATACGGAGGGAAACGCAGCAAGTGCTACCAATACCAATACGCAT GAGACTTGTAATAAATATGATAAAAACGATACGGCAATAATAAAAACTGC ACAGCAATACGATTCCAAAAGAACCACGCTTTCAGTTTCCACACTCGGAA AAATTAAACGATCATCCGCTGAAAAGAGTATCGGTACCATGATAAATAAA TTTGAAAAGAAGAAAAAATTGACAGTGCTTGAAAGGTCACAATTGGATTG GAAAATATTTAAACAAGACGAAGGCATAGACGAACTTCTGTGCTCGCATA ACAAAGGCAAGGACGGGTATTTGGACCGTCAAGACTTTTTGGAGAGAACC GATCTTAGGCAGTTTGAAATGGAAAAGAAGTTGCGGCTGTCTCGCAGGCC ATACTAACGGCTTAACCAACGTCGACACGGTAGCGCTGACTTCTTTGAAT AACGAATATATACATATAGTCTATTAAATATATTACATTTTGTTCTATAA CAAAATAATAAAAAAATGGTTGGGCTTACACCAATTCAATCAAAATAAAA GAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2RHet | 470844..471076 | 667..901 | 98 | <- | Minus |
chr2RHet | 471146..471809 | 1..666 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yeti-RA | 1..726 | 32..757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yeti-RA | 1..726 | 32..757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yeti-RA | 1..726 | 32..757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yeti-RA | 1..726 | 32..757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yeti-RA | 1..726 | 32..757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yeti-RA | 1..894 | 3..896 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yeti-RA | 1..894 | 3..896 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yeti-RA | 6..899 | 1..896 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yeti-RA | 1..894 | 3..896 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Yeti-RB | 6..902 | 1..901 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 1344149..1344381 | 667..901 | 98 | <- | Minus |
2R | 1344451..1345114 | 1..666 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 1344149..1344381 | 667..901 | 98 | <- | Minus |
2R | 1344451..1345114 | 1..666 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 1344149..1344381 | 667..901 | 98 | <- | Minus |
2R | 1344451..1345114 | 1..666 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2RHet | 470782..471014 | 667..901 | 98 | <- | Minus |
2RHet | 471084..471747 | 1..666 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 1344149..1344381 | 667..901 | 98 | <- | Minus |
2R | 1344451..1345114 | 1..666 | 99 | Minus |
Translation from 31 to 756
> RE36623.pep MNSQKEYVSDCETDDDYYVDLLTSGKGSDKSESDVSDKSENYPGLKSKHT AKALRKTRHCDGDNREYRSKECDDLHSEEESEKSRSDALWADFLGDIDTK SVINQKTDYTEGNAASATNTNTHETCNKYDKNDTAIIKTAQQYDSKRTTL SVSTLGKIKRSSAEKSIGTMINKFEKKKKLTVLERSQLDWKIFKQDEGID ELLCSHNKGKDGYLDRQDFLERTDLRQFEMEKKLRLSRRPY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11025-PA | 272 | GF11025-PA | 45..270 | 11..239 | 386 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10889-PA | 236 | GG10889-PA | 1..236 | 1..241 | 753 | 64.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21272-PA | 285 | GH21272-PA | 86..283 | 55..239 | 333 | 41.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Yeti-PB | 241 | CG40218-PB | 1..241 | 1..241 | 1261 | 100 | Plus |
Yeti-PA | 241 | CG40218-PA | 1..241 | 1..241 | 1261 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20398-PA | 295 | GI20398-PA | 81..293 | 55..239 | 346 | 42.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11059-PA | 275 | GL11059-PA | 1..273 | 1..239 | 426 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24593-PA | 275 | GA24593-PA | 1..273 | 1..239 | 431 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11057-PA | 241 | GM11057-PA | 1..241 | 1..241 | 1022 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19702-PA | 241 | GD19702-PA | 1..241 | 1..241 | 1016 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22228-PA | 300 | GJ22228-PA | 77..298 | 51..239 | 355 | 38.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10760-PA | 273 | GK10760-PA | 1..271 | 1..239 | 387 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18886-PA | 215 | GE18886-PA | 1..215 | 1..241 | 694 | 60.9 | Plus |
Translation from 31 to 756
> RE36623.hyp MNSQKEYVSDCETDDDYYVDLLTSGKGSDKSESDVSDKSENYPGLKSKHT AKALRKTRHCDGDNREYRSKECDDLHSEEESEKSRSDALWADFLGDIDTK SVINQKTDYTEGNAASATNTNTHETCNKYDKNDTAIIKTAQQYDSKRTTL SVSTLGKIKRSSAEKSIGTMINKFEKKKKLTVLERSQLDWKIFKQDEGID ELLCSHNKGKDGYLDRQDFLERTDLRQFEMEKKLRLSRRPY*