BDGP Sequence Production Resources |
Search the DGRC for RE36666
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 366 |
Well: | 66 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG1092-RC |
Protein status: | RE36666.pep: gold |
Preliminary Size: | 1388 |
Sequenced Size: | 1324 |
Gene | Date | Evidence |
---|---|---|
CG1092 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1092 | 2002-02-22 | Blastp of sequenced clone |
CG1092 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1092 | 2008-04-29 | Release 5.5 accounting |
CG1092 | 2008-08-15 | Release 5.9 accounting |
CG1092 | 2008-12-18 | 5.12 accounting |
1324 bp (1324 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089624
> RE36666.complete AGAGTGACTTGAGCTCTGCGATGACAACCTCAAGTCTTGCAATCGGCGCA TCCGTAGCGCTTATTCTGTTGATGTTGACTGGTTCAGGGCATTGCCAAGT GGGATACGTGCGGCACCTGTCGGAGCTGCGGATAAGGGAACTTGAAAAAT TGTCGGTTCGTATACAGGGCTCCATCAACACCGAAAAGTATGCCTGCGAG AGCTATTTCGACTACGTCTGTAGCCGCAATCGACCCCTCTTTTCGATCAT GGGACACATGCCGCAAATGGGCGATCTTATGCAGTTGCTGACCGAGCTGC AGAACGATCCAGAGCCATTCGAGGCTAAGCAGAAGACGCTGGACTTCTTC ATCTCCTGCAACGTGCACCACGCGCTGGAAGACTGCTATCGTGAGACCTA TGAGTATTTCAAGCCACTTTTCGGGTATATAGTTACAAAAAACATGCTCA ATGGAGAATCCCACGAGCTGGATGACTTTCTGGGCATTTTGGACCGCTTC GTCGTCAGGTTTCAGAAGGACAGAGAGTCGAATCCCATTCTCAGCAAGCT GGCCACGTATAAGCAGAAATTTAAAACGCCGCGAGTCTACTTCCATGCTA GAGACCTGAGCCGGGAGTACAAGGACCTGCGGATCTACCGGGAGAGCTAC GAACACAACGTTCGCAATCTGGAGCAGCACAGAAAACTGAATTCAACATA CGAATTGGGGGTTCAGCGCACCATGCTGGATTGGAGCATGTACCTCTTTC AGAGCCGCAACAAGCCCATGTCCTACTTCTACTCCACGTTTACGGTCCAT TTGTACATGATGCTTTTTAATAGTCTGGAGCGTCAGCGTGATTTCACGCG GTTTCGCGAAGATGTGGAGTGTTTAAGGCTGCCGCAGTTCGTTAATGTTC TGGATGAGGCCAGAATGCTGGCTGTGATCTACTTAAAGAGCTTCCGAGCG GCCTGGATAGACTACAGCGCCTGGATCAACTCGCCTCCACAGAACAGTGG GATATACGATCAGGAAAATGGCGTCCTTCAAAAGTACCATCTTGACAACA AGCGTATATTTTTTACTCTTTACGCTCAGAACTTCTGTGAGTTTGGGAAG GATCTGGCCGAGCATGTCTTCTATCTGGGCCTTAAACAGAACAAGGACTT TTACGACATATACTCTTGTGGATTCCAAACGGAAAACCCTATGACTTGTG TTTAAAAGATCAAGACCATTTCTACCATATATTTAGTTTACGAGATACAA TAAAAGCAATAACATTCTCATAAAGGTGTACAAACCATTTGAAAAAAATG GCTTTCACCAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 92675..92926 | 1..252 | 99 | -> | Plus |
chr3R | 92982..94037 | 253..1309 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1092-RA | 1..1134 | 72..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1092-RA | 1..1134 | 72..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1092-RC | 1..1185 | 21..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1092-RA | 1..1134 | 72..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1092-RC | 1..1185 | 21..1205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1092-RA | 3..1308 | 3..1309 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1092-RA | 3..1308 | 3..1309 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1092-RC | 185..1492 | 1..1308 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1092-RA | 3..1308 | 3..1309 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1092-RC | 185..1492 | 1..1308 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4267261..4268316 | 253..1309 | 99 | Plus | |
3R | 4266954..4267205 | 1..252 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4267261..4268316 | 253..1309 | 99 | Plus | |
3R | 4266954..4267205 | 1..252 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4267261..4268316 | 253..1309 | 99 | Plus | |
3R | 4266954..4267205 | 1..252 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 92676..92927 | 1..252 | 99 | -> | Plus |
arm_3R | 92983..94038 | 253..1309 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4007785..4008036 | 1..252 | 99 | -> | Plus |
3R | 4008092..4009147 | 253..1309 | 99 | Plus |
Translation from 2 to 1204
> RE36666.hyp SDLSSAMTTSSLAIGASVALILLMLTGSGHCQVGYVRHLSELRIRELEKL SVRIQGSINTEKYACESYFDYVCSRNRPLFSIMGHMPQMGDLMQLLTELQ NDPEPFEAKQKTLDFFISCNVHHALEDCYRETYEYFKPLFGYIVTKNMLN GESHELDDFLGILDRFVVRFQKDRESNPILSKLATYKQKFKTPRVYFHAR DLSREYKDLRIYRESYEHNVRNLEQHRKLNSTYELGVQRTMLDWSMYLFQ SRNKPMSYFYSTFTVHLYMMLFNSLERQRDFTRFREDVECLRLPQFVNVL DEARMLAVIYLKSFRAAWIDYSAWINSPPQNSGIYDQENGVLQKYHLDNK RIFFTLYAQNFCEFGKDLAEHVFYLGLKQNKDFYDIYSCGFQTENPMTCV *
Translation from 20 to 1204
> RE36666.pep MTTSSLAIGASVALILLMLTGSGHCQVGYVRHLSELRIRELEKLSVRIQG SINTEKYACESYFDYVCSRNRPLFSIMGHMPQMGDLMQLLTELQNDPEPF EAKQKTLDFFISCNVHHALEDCYRETYEYFKPLFGYIVTKNMLNGESHEL DDFLGILDRFVVRFQKDRESNPILSKLATYKQKFKTPRVYFHARDLSREY KDLRIYRESYEHNVRNLEQHRKLNSTYELGVQRTMLDWSMYLFQSRNKPM SYFYSTFTVHLYMMLFNSLERQRDFTRFREDVECLRLPQFVNVLDEARML AVIYLKSFRAAWIDYSAWINSPPQNSGIYDQENGVLQKYHLDNKRIFFTL YAQNFCEFGKDLAEHVFYLGLKQNKDFYDIYSCGFQTENPMTCV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18200-PA | 392 | GF18200-PA | 2..392 | 4..394 | 1694 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12252-PA | 394 | GG12252-PA | 1..394 | 1..394 | 2008 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19089-PA | 391 | GH19089-PA | 2..391 | 8..394 | 1423 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1092-PD | 394 | CG1092-PD | 1..394 | 1..394 | 2097 | 100 | Plus |
CG1092-PC | 394 | CG1092-PC | 1..394 | 1..394 | 2097 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10851-PA | 390 | GI10851-PA | 4..390 | 10..394 | 1419 | 66.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12312-PA | 391 | GL12312-PA | 3..391 | 5..394 | 1537 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10643-PA | 391 | GA10643-PA | 3..391 | 5..394 | 1545 | 73.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10741-PA | 394 | GM10741-PA | 1..394 | 1..394 | 2094 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19713-PA | 394 | GD19713-PA | 1..394 | 1..394 | 2083 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14458-PA | 390 | GJ14458-PA | 9..390 | 15..394 | 1414 | 66 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25402-PA | 394 | GE25402-PA | 1..394 | 1..394 | 1965 | 90.6 | Plus |