BDGP Sequence Production Resources |
Search the DGRC for RE36735
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 367 |
Well: | 35 |
Vector: | pFlc-1 |
Associated Gene/Transcript | eIF-4E-RC |
Protein status: | RE36735.pep: gold |
Sequenced Size: | 1169 |
Gene | Date | Evidence |
---|---|---|
CG4035 | 2004-03-31 | Blastp of sequenced clone |
eIF-4E | 2008-04-29 | Release 5.5 accounting |
eIF-4E | 2008-08-15 | Release 5.9 accounting |
eIF-4E | 2008-12-18 | 5.12 accounting |
1169 bp (1169 high quality bases) assembled on 2004-03-31
GenBank Submission: BT012467
> RE36735.complete ACTAACTTTCCTTTAGGCAACGGCCACACTGTCTGGCCACCAAAATCCCA AACTTAATTAAAGAATTAAATAATTCGAATAATAATTAAGCCCAGTAACC TACGCAGCTTGAGTGCGTAACCGATATCTAGTATACATTTCGATACATCG AAATCATGGTAGTGTTGGAGACGGAGAAGACCAGCGCCCCCAGCACCGAG CAGGGTCGTCCGGAACCACCAACTTCGGCTGCAGCGCCCGCCGAGGCTAA GGATGTCAAGCCCAAGGAGGACCCACAGGAGACTGGTGAACCAGCAGGCA ACACTGCAACCACTACTGCTCCTGCCGGCGACGATGCTGTGCGCACCGAG CATTTATACAAACACCCGCTCATGAATGTCTGGACGCTGTGGTACCTTGA AAACGATCGGTCCAAGTCCTGGGAGGACATGCAAAACGAGATCACCAGCT TCGATACCGTCGAGGACTTCTGGAGCCTATACAACCACATCAAGCCCCCA TCAGAGATCAAGCTGGGTAGTGACTACTCGCTATTCAAGAAGAACATTCG TCCCATGTGGGAGGATGCAGCCAACAAACAGGGCGGTCGTTGGGTCATTA CCCTTAACAAAAGCTCCAAGACCGATCTGGATAACCTATGGCTCGATGTG CTGCTCTGCCTGATTGGTGAGGCCTTCGATCACTCTGATCAGATCTGCGG CGCTGTTATAAACATTCGCGGCAAGAGCAACAAGATATCCATCTGGACTG CCGACGGAAACAACGAGGAAGCTGCCCTTGAGATTGGTCACAAGCTGCGC GATGCCCTGCGTCTGGGACGCAACAACTCGCTGCAGTATCAGTTGCACAA GGACACGATGGTCAAGCAGGGCTCCAACGTGAAATCGATCTACACTTTGT AGGCGGCTAATAACTGGCCGCTCCTTATTCGGTCCGATCCCACACTGATT ATTTTGTCTTTCATTTATTTATCGTTATAAGCAACAGTAGCGATTAATCG TGACTATTGTCTAAGACCCGCGTAACGAAACCGAAACGGAACCCCCTTTG TTATCAAAAATCGGCATAATATAAAATCTATCCGCTTTTTGTAGTCACTG TCAATAATGGATTAGACGGAAAAGTATATTAATAAAAACCTACATTAAAA CCGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF-4E-RC | 1453 | eIF-4E-RC | 255..1407 | 1..1153 | 5765 | 100 | Plus |
eIF-4E-RB | 1603 | eIF-4E-RB | 584..1557 | 180..1153 | 4870 | 100 | Plus |
eIF-4E-RD | 1851 | eIF-4E-RD | 832..1805 | 180..1153 | 4870 | 100 | Plus |
eIF-4E-RB | 1603 | eIF-4E-RB | 77..255 | 1..179 | 895 | 100 | Plus |
eIF-4E-RD | 1851 | eIF-4E-RD | 86..264 | 1..179 | 895 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9391516..9391930 | 1153..739 | 2000 | 98.8 | Minus |
chr3L | 24539361 | chr3L | 9392480..9392852 | 550..178 | 1865 | 100 | Minus |
chr3L | 24539361 | chr3L | 9394188..9394366 | 179..1 | 880 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 9392316..9392416 | 650..550 | 490 | 99 | Minus |
chr3L | 24539361 | chr3L | 9391994..9392082 | 738..650 | 430 | 98.9 | Minus |
chrX | 22417052 | chrX | 1052926..1053303 | 757..380 | 390 | 73.5 | Minus |
chr3R | 27901430 | chr3R | 24849489..24849817 | 748..420 | 310 | 72.9 | Minus |
chr3L | 24539361 | chr3L | 6657539..6657707 | 549..381 | 290 | 78.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 9399619..9400033 | 1153..739 | 2075 | 100 | Minus |
3L | 28110227 | 3L | 9400583..9400955 | 550..178 | 1865 | 100 | Minus |
3L | 28110227 | 3L | 9402280..9402458 | 179..1 | 895 | 100 | Minus |
3L | 28110227 | 3L | 9400419..9400519 | 650..550 | 505 | 100 | Minus |
3L | 28110227 | 3L | 9400097..9400185 | 738..650 | 445 | 100 | Minus |
X | 23542271 | X | 1158961..1159338 | 757..380 | 390 | 73.5 | Minus |
3R | 32079331 | 3R | 29026520..29026848 | 748..420 | 325 | 73.3 | Minus |
3L | 28110227 | 3L | 6665168..6665336 | 549..381 | 290 | 78.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 9392719..9393133 | 1153..739 | 2075 | 100 | Minus |
3L | 28103327 | 3L | 9393683..9394055 | 550..178 | 1865 | 100 | Minus |
3L | 28103327 | 3L | 9395380..9395558 | 179..1 | 895 | 100 | Minus |
3L | 28103327 | 3L | 9393519..9393619 | 650..550 | 505 | 100 | Minus |
3L | 28103327 | 3L | 9393197..9393285 | 738..650 | 445 | 100 | Minus |
X | 23527363 | X | 1167242..1167369 | 574..447 | 325 | 83.5 | Minus |
3L | 28103327 | 3L | 6658268..6658436 | 549..381 | 290 | 78.1 | Minus |
3R | 31820162 | 3R | 28767533..28767679 | 566..420 | 255 | 78.2 | Minus |
3L | 28103327 | 3L | 6657952..6658025 | 733..660 | 145 | 79.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9391516..9391930 | 739..1153 | 98 | <- | Minus |
chr3L | 9391994..9392081 | 651..738 | 98 | <- | Minus |
chr3L | 9392316..9392415 | 551..650 | 99 | <- | Minus |
chr3L | 9392480..9392850 | 180..550 | 100 | <- | Minus |
chr3L | 9394188..9394366 | 1..179 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-4E-RC | 1..747 | 156..902 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-4E-RC | 1..747 | 156..902 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-4E-RC | 1..747 | 156..902 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-4E-RC | 1..747 | 156..902 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-4E-RC | 1..747 | 156..902 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-4E-RC | 8..1160 | 1..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-4E-RC | 8..1160 | 1..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-4E-RC | 3..1155 | 1..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-4E-RC | 8..1160 | 1..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-4E-RC | 3..1155 | 1..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9399619..9400033 | 739..1153 | 100 | <- | Minus |
3L | 9400097..9400184 | 651..738 | 100 | <- | Minus |
3L | 9400419..9400518 | 551..650 | 100 | <- | Minus |
3L | 9400583..9400953 | 180..550 | 100 | <- | Minus |
3L | 9402280..9402458 | 1..179 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9399619..9400033 | 739..1153 | 100 | <- | Minus |
3L | 9400097..9400184 | 651..738 | 100 | <- | Minus |
3L | 9400419..9400518 | 551..650 | 100 | <- | Minus |
3L | 9400583..9400953 | 180..550 | 100 | <- | Minus |
3L | 9402280..9402458 | 1..179 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9399619..9400033 | 739..1153 | 100 | <- | Minus |
3L | 9400097..9400184 | 651..738 | 100 | <- | Minus |
3L | 9400419..9400518 | 551..650 | 100 | <- | Minus |
3L | 9400583..9400953 | 180..550 | 100 | <- | Minus |
3L | 9402280..9402458 | 1..179 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9392719..9393133 | 739..1153 | 100 | <- | Minus |
arm_3L | 9393197..9393284 | 651..738 | 100 | <- | Minus |
arm_3L | 9393519..9393618 | 551..650 | 100 | <- | Minus |
arm_3L | 9393683..9394053 | 180..550 | 100 | <- | Minus |
arm_3L | 9395380..9395558 | 1..179 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9392719..9393133 | 739..1153 | 100 | <- | Minus |
3L | 9393197..9393284 | 651..738 | 100 | <- | Minus |
3L | 9393519..9393618 | 551..650 | 100 | <- | Minus |
3L | 9393683..9394053 | 180..550 | 100 | <- | Minus |
3L | 9395380..9395558 | 1..179 | 100 | Minus |
Translation from 155 to 901
> RE36735.pep MVVLETEKTSAPSTEQGRPEPPTSAAAPAEAKDVKPKEDPQETGEPAGNT ATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITSFD TVEDFWSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANKQGGRWVITL NKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIRGKSNKISIWTAD GNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23736-PA | 261 | GF23736-PA | 19..261 | 8..248 | 1022 | 79.6 | Plus |
Dana\GF22031-PA | 458 | GF22031-PA | 247..458 | 20..248 | 788 | 65.5 | Plus |
Dana\GF10894-PA | 230 | GF10894-PA | 51..230 | 68..248 | 745 | 75.1 | Plus |
Dana\GF10327-PA | 271 | GF10327-PA | 92..271 | 68..248 | 655 | 64.1 | Plus |
Dana\GF25106-PA | 244 | GF25106-PA | 66..244 | 69..248 | 590 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14044-PA | 250 | GG14044-PA | 1..250 | 1..248 | 1216 | 92.8 | Plus |
Dere\GG15032-PA | 229 | GG15032-PA | 51..229 | 69..248 | 742 | 75.6 | Plus |
Dere\GG12718-PA | 448 | GG12718-PA | 254..448 | 53..248 | 741 | 67.9 | Plus |
Dere\GG14453-PA | 231 | GG14453-PA | 52..231 | 68..248 | 648 | 65.2 | Plus |
Dere\GG14292-PA | 244 | GG14292-PA | 66..244 | 69..248 | 582 | 55 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16860-PA | 275 | GH16860-PA | 85..275 | 58..248 | 956 | 91.1 | Plus |
Dgri\GH15637-PA | 233 | GH15637-PA | 17..233 | 20..248 | 709 | 61.1 | Plus |
Dgri\GH24331-PA | 222 | GH24331-PA | 41..222 | 67..248 | 676 | 64.8 | Plus |
Dgri\GH14978-PA | 232 | GH14978-PA | 3..232 | 23..248 | 651 | 52.8 | Plus |
Dgri\GH12729-PA | 300 | GH12729-PA | 109..300 | 60..248 | 613 | 59.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF4E1-PC | 248 | CG4035-PC | 1..248 | 1..248 | 1321 | 100 | Plus |
eIF4E1-PI | 259 | CG4035-PI | 19..259 | 8..248 | 1289 | 100 | Plus |
eIF4E1-PH | 259 | CG4035-PH | 19..259 | 8..248 | 1289 | 100 | Plus |
eIF4E1-PD | 259 | CG4035-PD | 19..259 | 8..248 | 1289 | 100 | Plus |
eIF4E1-PB | 259 | CG4035-PB | 19..259 | 8..248 | 1289 | 100 | Plus |
eIF4E1-PF | 259 | CG4035-PF | 19..259 | 8..248 | 1289 | 100 | Plus |
eIF4E1-PE | 259 | CG4035-PE | 19..259 | 8..248 | 1289 | 100 | Plus |
eIF4E1-PG | 259 | CG4035-PG | 19..259 | 8..248 | 1289 | 100 | Plus |
eIF4E1-PA | 259 | CG4035-PA | 19..259 | 8..248 | 1289 | 100 | Plus |
eIF4E4-PA | 229 | CG10124-PA | 51..227 | 69..246 | 724 | 74.7 | Plus |
eIF4E7-PA | 429 | CG32859-PA | 250..429 | 69..248 | 672 | 67.8 | Plus |
eIF4E5-PA | 232 | CG8277-PA | 2..232 | 25..248 | 665 | 53.8 | Plus |
eIF4E3-PA | 244 | CG8023-PA | 66..244 | 69..248 | 614 | 58.3 | Plus |
eIF4E6-PC | 173 | CG1442-PC | 32..168 | 69..204 | 448 | 60.6 | Plus |
eIF4E6-PB | 173 | CG1442-PB | 32..168 | 69..204 | 448 | 60.6 | Plus |
eIF4E6-PA | 173 | CG1442-PA | 32..168 | 69..204 | 448 | 60.6 | Plus |
eIF4EHP-PA | 223 | CG33100-PA | 48..211 | 72..235 | 258 | 29.9 | Plus |
eIF4EHP-PD | 242 | CG33100-PD | 48..211 | 72..235 | 258 | 29.9 | Plus |
eIF4EHP-PB | 248 | CG33100-PB | 48..172 | 72..196 | 210 | 32 | Plus |
eIF4EHP-PC | 186 | CG33100-PC | 48..164 | 72..188 | 208 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12684-PA | 246 | GI12684-PA | 67..246 | 68..248 | 721 | 72.9 | Plus |
Dmoj\GI14982-PA | 311 | GI14982-PA | 106..310 | 45..247 | 719 | 66.3 | Plus |
Dmoj\GI13141-PA | 238 | GI13141-PA | 59..238 | 68..248 | 638 | 62.4 | Plus |
Dmoj\GI13083-PA | 125 | GI13083-PA | 43..125 | 166..248 | 415 | 91.6 | Plus |
Dmoj\GI16776-PA | 198 | GI16776-PA | 98..162 | 68..132 | 231 | 58.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12850-PA | 198 | GL12850-PA | 8..198 | 56..248 | 972 | 94.3 | Plus |
Dper\GL13241-PA | 223 | GL13241-PA | 45..223 | 69..248 | 701 | 69.4 | Plus |
Dper\GL26506-PA | 219 | GL26506-PA | 16..219 | 48..248 | 550 | 50.2 | Plus |
Dper\GL14400-PA | 233 | GL14400-PA | 22..233 | 33..248 | 546 | 48.1 | Plus |
Dper\GL18042-PA | 204 | GL18042-PA | 16..204 | 32..248 | 400 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28658-PA | 263 | GA28658-PA | 19..263 | 8..248 | 1001 | 80.5 | Plus |
Dpse\GA28599-PA | 223 | GA28599-PA | 45..223 | 69..248 | 706 | 70 | Plus |
Dpse\GA28380-PA | 227 | GA28380-PA | 23..227 | 35..248 | 651 | 59.8 | Plus |
Dpse\GA24628-PA | 234 | GA24628-PA | 52..234 | 65..248 | 595 | 56.5 | Plus |
Dpse\GA23005-PA | 233 | GA23005-PA | 22..233 | 33..248 | 554 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24878-PA | 269 | GM24878-PA | 1..269 | 1..248 | 1272 | 90.7 | Plus |
Dsec\GM13832-PA | 229 | GM13832-PA | 51..229 | 69..248 | 726 | 73.9 | Plus |
Dsec\GM18997-PA | 422 | GM18997-PA | 243..422 | 69..248 | 666 | 64.4 | Plus |
Dsec\GM25004-PA | 233 | GM25004-PA | 2..233 | 25..248 | 642 | 52.3 | Plus |
Dsec\GM25034-PA | 244 | GM25034-PA | 66..244 | 69..248 | 598 | 57.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12928-PA | 269 | GD12928-PA | 1..269 | 1..248 | 1270 | 90.7 | Plus |
Dsim\GD13118-PA | 229 | GD13118-PA | 51..229 | 69..248 | 725 | 73.9 | Plus |
Dsim\GD14038-PA | 233 | GD14038-PA | 2..233 | 25..248 | 641 | 51.5 | Plus |
Dsim\GD14067-PA | 244 | GD14067-PA | 66..244 | 69..248 | 598 | 57.2 | Plus |
Dsim\GD16435-PA | 420 | GD16435-PA | 248..389 | 69..210 | 573 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13832-PA | 272 | GJ13832-PA | 28..272 | 5..248 | 980 | 78.4 | Plus |
Dvir\GJ19475-PA | 323 | GJ19475-PA | 94..323 | 22..248 | 899 | 75.7 | Plus |
Dvir\GJ12668-PA | 230 | GJ12668-PA | 51..230 | 68..248 | 721 | 72.9 | Plus |
Dvir\GJ16331-PA | 301 | GJ16331-PA | 92..300 | 40..247 | 713 | 65.4 | Plus |
Dvir\GJ13889-PA | 238 | GJ13889-PA | 59..238 | 68..248 | 644 | 62.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20927-PA | 266 | GK20927-PA | 33..266 | 17..248 | 1005 | 80.9 | Plus |
Dwil\GK25580-PA | 300 | GK25580-PA | 114..300 | 62..248 | 872 | 82.9 | Plus |
Dwil\GK12168-PA | 260 | GK12168-PA | 34..260 | 19..248 | 832 | 66.5 | Plus |
Dwil\GK14373-PA | 235 | GK14373-PA | 57..235 | 69..248 | 820 | 81.7 | Plus |
Dwil\GK16243-PA | 360 | GK16243-PA | 166..360 | 51..248 | 773 | 72.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21247-PA | 269 | GE21247-PA | 1..269 | 1..248 | 1262 | 89.6 | Plus |
Dyak\GE16544-PA | 448 | GE16544-PA | 248..448 | 47..248 | 744 | 65.8 | Plus |
Dyak\GE20475-PA | 229 | GE20475-PA | 51..229 | 69..248 | 735 | 75 | Plus |
Dyak\GE21642-PA | 231 | GE21642-PA | 2..231 | 25..248 | 664 | 54.5 | Plus |
Dyak\GE20721-PA | 244 | GE20721-PA | 66..244 | 69..248 | 583 | 55.6 | Plus |
Translation from 155 to 901
> RE36735.hyp MVVLETEKTSAPSTEQGRPEPPTSAAAPAEAKDVKPKEDPQETGEPAGNT ATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITSFD TVEDFWSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANKQGGRWVITL NKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIRGKSNKISIWTAD GNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF-4E-PC | 248 | CG4035-PC | 1..248 | 1..248 | 1321 | 100 | Plus |
eIF-4E-PI | 259 | CG4035-PI | 19..259 | 8..248 | 1289 | 100 | Plus |
eIF-4E-PH | 259 | CG4035-PH | 19..259 | 8..248 | 1289 | 100 | Plus |
eIF-4E-PD | 259 | CG4035-PD | 19..259 | 8..248 | 1289 | 100 | Plus |
eIF-4E-PB | 259 | CG4035-PB | 19..259 | 8..248 | 1289 | 100 | Plus |