BDGP Sequence Production Resources |
Search the DGRC for RE36793
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 367 |
Well: | 93 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG10433-RA |
Protein status: | RE36793.pep: gold |
Sequenced Size: | 961 |
Gene | Date | Evidence |
---|---|---|
CG10433-RA | 2010-01-13 | Manual selection by Sue Celniker |
961 bp assembled on 2010-02-11
GenBank Submission: BT120316.1
> RE36793.complete AGTTCAACGCAAACCGCGCCATCGAGAGGAAGTGGATTACTGCTGCTGCC AAGCTGCCAGAGTGAAGTGCATTGAAAGCAGAGCGAATCAGAACGAAATT CAAAACGTATCACGCATACGCCCGGTAGTACAGCCGAATATCCCCAAATA GCCGAATATGTCGCCGAGAAGGAGCTTGCTGTGCTGCCTGCTGGTGAGCA GCATCCTAGTGCTGCACCAGGCTCAGGCCAACATCGAGACAAACGATGTG AATGACCCCAGTTACTACATGCTGCAGGGTGTGCGTGTGTATCCCAATGA CCGACAGTGCGTCATGGTCGGAGGACTGTGTGTCGCGGAGTCGGACTGCA TCGAACCCACCTCGAACAAGGGATTGTGTCCCACGAGTGCCGGAGAGGGC GTGGAGTGCTGCTACGAACTGCCGGTCAGACCAGCGCCCTGTGCGGAACA CCTGGGACAGTGCATGGACCGATGCCACCAGAGGCTCCTGCGACCCGGTT CGGATTGCAAGAATGGCCAAGTCTGCTGCGTCCTGATTTAGTTATACTTA ACCACACCATACACATACCCGTGCAGAGGAACAGCATCGTCAAATGATAA CAAAATAGCCTCCAAGTTGGGCAAGTCAGAGTGACAATTCTTGAATACCT AAAGTTTATATTCGAGACTTCTAGAATATTCGAAAAATATTAGACAACAC TAACATTAAATTGATTTGACAAAATTGAGTGCTGAGCGGATTGAAACTAA TTTGGTTGTGTCATTCCTCTGTACACATACACACACACACACACCGTACA TAAACATGTATTTATTTAACTATATGTATATTAATTATATTGTACGAATA ATTTTGTATGACATCTTAAGAGCCCCAAATCTACCCACAATGTGAAATAT TTGACTGCTTCCAATAAATGCATTGTAAATATTTTCCAAAAAAAAGAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10433.a | 1284 | CG10433.a | 104..1048 | 1..945 | 4710 | 99.8 | Plus |
CG10433-RA | 1331 | CG10433-RA | 335..1279 | 1..945 | 4710 | 99.8 | Plus |
CG10433-RB | 1371 | CG10433-RB | 854..1371 | 420..937 | 2590 | 100 | Plus |
CG10433-RB | 1371 | CG10433-RB | 268..687 | 1..420 | 2100 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17492081..17492606 | 945..420 | 2615 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 17493094..17493362 | 269..1 | 1345 | 100 | Minus |
chr2R | 21145070 | chr2R | 17492881..17493030 | 419..270 | 750 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21605668..21606193 | 945..420 | 2615 | 99.8 | Minus |
2R | 25286936 | 2R | 21606681..21606949 | 269..1 | 1345 | 100 | Minus |
2R | 25286936 | 2R | 21606468..21606617 | 419..270 | 750 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21606867..21607392 | 945..420 | 2615 | 99.8 | Minus |
2R | 25260384 | 2R | 21607880..21608148 | 269..1 | 1345 | 100 | Minus |
2R | 25260384 | 2R | 21607667..21607816 | 419..270 | 750 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17492080..17492606 | 420..946 | 99 | <- | Minus |
chr2R | 17492881..17493030 | 270..419 | 100 | <- | Minus |
chr2R | 17493094..17493362 | 1..269 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10433-RA | 1..384 | 158..541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10433-RA | 1..384 | 158..541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10433-RA | 1..384 | 158..541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10433-RA | 1..384 | 158..541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10433-RA | 5..941 | 1..937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10433-RA | 5..941 | 1..937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10433-RA | 9..945 | 1..937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10433-RA | 9..945 | 1..937 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21605667..21606193 | 420..946 | 99 | <- | Minus |
2R | 21606468..21606617 | 270..419 | 100 | <- | Minus |
2R | 21606681..21606949 | 1..269 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21605667..21606193 | 420..946 | 99 | <- | Minus |
2R | 21606468..21606617 | 270..419 | 100 | <- | Minus |
2R | 21606681..21606949 | 1..269 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21605667..21606193 | 420..946 | 99 | <- | Minus |
2R | 21606468..21606617 | 270..419 | 100 | <- | Minus |
2R | 21606681..21606949 | 1..269 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17493172..17493698 | 420..946 | 99 | <- | Minus |
arm_2R | 17493973..17494122 | 270..419 | 100 | <- | Minus |
arm_2R | 17494186..17494454 | 1..269 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21606866..21607392 | 420..946 | 99 | <- | Minus |
2R | 21607667..21607816 | 270..419 | 100 | <- | Minus |
2R | 21607880..21608148 | 1..269 | 100 | Minus |
Translation from 157 to 540
> RE36793.hyp MSPRRSLLCCLLVSSILVLHQAQANIETNDVNDPSYYMLQGVRVYPNDRQ CVMVGGLCVAESDCIEPTSNKGLCPTSAGEGVECCYELPVRPAPCAEHLG QCMDRCHQRLLRPGSDCKNGQVCCVLI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10433-PC | 127 | CG10433-PC | 1..127 | 1..127 | 702 | 100 | Plus |
CG10433-PA | 127 | CG10433-PA | 1..127 | 1..127 | 702 | 100 | Plus |
CG10433-PB | 98 | CG10433-PB | 1..96 | 1..96 | 485 | 93.8 | Plus |
Translation from 157 to 540
> RE36793.pep MSPRRSLLCCLLVSSILVLHQAQANIETNDVNDPSYYMLQGVRVYPNDRQ CVMVGGLCVAESDCIEPTSNKGLCPTSAGEGVECCYELPVRPAPCAEHLG QCMDRCHQRLLRPGSDCKNGQVCCVLI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12088-PA | 129 | GF12088-PA | 1..129 | 1..127 | 519 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20765-PA | 98 | GG20765-PA | 1..98 | 1..98 | 436 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20050-PA | 129 | GH20050-PA | 1..129 | 1..127 | 332 | 52.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10433-PC | 127 | CG10433-PC | 1..127 | 1..127 | 702 | 100 | Plus |
CG10433-PA | 127 | CG10433-PA | 1..127 | 1..127 | 702 | 100 | Plus |
CG10433-PB | 98 | CG10433-PB | 1..96 | 1..96 | 485 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20459-PA | 130 | GI20459-PA | 11..128 | 10..127 | 396 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17485-PA | 129 | GL17485-PA | 1..129 | 1..127 | 509 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10315-PA | 129 | GA10315-PA | 1..129 | 1..127 | 509 | 75.2 | Plus |
Dpse\GA10315-PB | 127 | GA10315-PB | 1..99 | 1..93 | 314 | 63.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15708-PA | 98 | GM15708-PA | 1..97 | 1..97 | 456 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25186-PA | 98 | GD25186-PA | 1..97 | 1..97 | 459 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22309-PA | 128 | GJ22309-PA | 10..128 | 11..127 | 418 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22257-PA | 128 | GK22257-PA | 22..128 | 24..127 | 402 | 71 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13697-PA | 98 | GE13697-PA | 1..97 | 1..97 | 432 | 83.5 | Plus |