BDGP Sequence Production Resources |
Search the DGRC for RE36966
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 369 |
Well: | 66 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG7739-RA |
Protein status: | RE36966.pep: gold |
Preliminary Size: | 1901 |
Sequenced Size: | 2295 |
Gene | Date | Evidence |
---|---|---|
CG7739 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7739 | 2002-01-03 | Blastp of sequenced clone |
CG7739 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7739 | 2008-04-29 | Release 5.5 accounting |
CG7739 | 2008-08-15 | Release 5.9 accounting |
CG7739 | 2008-12-18 | 5.12 accounting |
2295 bp (2295 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075477
> RE36966.complete GCTGTCAACAAAATATCGCTCAGCCCATCTGATTCACTATTGATTTTCTT CAATAACAAAGCAGAGGAAAGTAGACAAAAAATAACGCAATTTGGGAAAT ACAAAACTTGGAAATTCTGAAATTCGGAATGACGAGATGCAGTCTTGTAT TGGGTCTCCTGCTGGCCCTGGGCAACCTGATTCACGCCAGTAATATCACT GATAAAGTTTTTGCAGACATTAAAGAGGGCATTGTGGCAGCTTTCGGAGA TTTCAATTCCGACGAACTCACGGATGTTTTTGTAATTCGCGATGGGATGA AGAGGTTGCAGATACTCTTCGGGCACTATACGGAGCCTCTGCTTAAACTG GGACCAGACTGCCAGTACGGAGATAAGACCATTGTTAGTGTTATACCTGG AGATTTTGATGGCGACGCCCTGATGGACGTGCTGGTAAACCTGAAGGGGA AGGACGAGGAGACCTACGAGGTGCACATCAACTGGGGCAATACCACCGAA CTGAAGTGCTCCAATAAGTCACTTTTTACCAGTAAAGGAGAGGTAATGGC CCTGGACTTTAACCGCGATATGATTATCGATTTATACGGACTTGATTCTG CGGAAAGGCGTACATTCTGGATATTCAACAGCAGTAGGCTTCCGCCGGAG GCTGTACACCAAGCAGAACCCACGGAGTTCAAGGAAAACTTAAGCATCCC CAATGCAAATGCCTATCTCGATCTGAACGGCGACTTCTTGGCCGATCTGT TCTTGCAGACGAAGAGCTCCTACGAAATATGGCACGGCATCAACGAGCGA GACAAGCAGGAGAATTTCAGCTACCAATATCAAATTAAGTTCCAGCCGAT CGGAGGCAATGATTATTACATCGGTCAGGCTGTGTTCATGGACTTCGAGC TAAAGGGCGTGCAGAACATTGTGGTTCCGTTTTGCATCCTATCCAATTGC CGGAACTCCTCAATCATGGTGCATGATGGCACAGATTTTCGTAATCTCCA TGTAAACTTCCGCGATCCACAGGGCGTCACTTGGGCCTTTGTGCCGCCCG TGTCAGATGATGTTTACTTGCGAACCATTACGGCAAGGAGTGGGGACTTC AACCTGGATGGGTATCCTGATCTCCTGGTTACTTTGCAGCCACTAAATGT GGATAAGCCAGTGATGCAGACGTTCCTGCTAGAGAATGTTCCTTGCACAA CGTGTAACAAGCCGCTAAAGCGCACTTTCGAGGTACGCTGGAACGCCCTT TCGCCAATGGGCAACAACACGGTGGCAGGTGCATTCTACGACTTCTACCA AGACGGTGTGCTCGATGTGATTCTTATTCGAAAAGATGGAAAGGGCAAAT ACCAGCCACTCGCTTTCCGGAACACGCTTGACTATGACGCGAACTTTGTG AAGGTGATTGTGCTAACTGGCTTGGATAACAAGCAGAACCCGGAGAGACG CACTCCTTTGGGTAGGAAAAAGCGAACCTATGGCACTAACTTGCCAGGAC CACGGATCACCTACAGTACCACTACTCAGGATGGTGATCAGCAGTGCGGC AGTAGCGTTCAACTACCGCAGGCCTCGTATTTTGCTCTGCAACTACCGTA TACGTGCTTTGGCTTGGGCCGAACGCCAAATTTCGTGGATCAATTGACTG TAGGACTGGGCAGCAAGTTGCGCAACTGGACGCAACTTATACCGAACTCT CAGATAATTGTGGTTCCAAAACCCCTAAACGAACCGTCGCACTGGAAGGC TCAGCTTTTTGTCACGCCTAGCAAACTGATTCTGATGAGCGTCGTGGCGC TGGGTGGCACCTGCCTGGTTATCGTCTTTATCATCCTTGTGCTATATATC AAGGAAAAGCGCGAGGATAAACAGGAACGCTTGCAGGAGTCTCACAGATT CCATTTCGATGCAATGTAAGGTGGTCGCCCCATTAAATGTAAATTAACTA ATTAACACTTTTGATTCAACCCATAAGATGAGCTTTTAATTTTATTATTA TATAATGTTGATTAATATTCCTAAAAGAAAGGAGCGCTCTATTAACTCCA TTATAAGCTTTCCAACCATATTGATGTCCTAAAATGCCACAAACAAATTG ATAAAAATGTAAAGTAGAACAATATTTGGCGGACCATCTCAAGGCGGCTT TTAAAATCATAGCTCATCATGGAATCAATAGAGATGCTCCTTTACATAAT TTATATTTGTAATATGGTTTAAGAAATGTGATAATATAAAAAAGATAAAA AATAATAAGATTCAATACGTTGCTCAGGCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dhyd\Bungy | 227 | Dhyd\Bungy DH14600 227bp Derived from U14600 (Rel. 63, Last updated, Version 2). | 81..174 | 2162..2066 | 162 | 67.3 | Minus |
invader3 | 5484 | invader3 INVADER3 5484bp | 5048..5114 | 2013..1944 | 117 | 67.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15550650..15552607 | 322..2279 | 97 | <- | Minus |
chr3L | 15552667..15552987 | 1..321 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7739-RA | 1..1791 | 129..1919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7739-RA | 1..1791 | 129..1919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7739-RA | 1..1791 | 129..1919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7739-RA | 1..1791 | 129..1919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7739-RA | 1..1791 | 129..1919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7739-RA | 1..2272 | 1..2272 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7739-RA | 1..2272 | 1..2272 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7739-RA | 3..2281 | 1..2279 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7739-RA | 1..2272 | 1..2272 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7739-RA | 3..2281 | 1..2279 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15560726..15562683 | 322..2279 | 99 | <- | Minus |
3L | 15562743..15563063 | 1..321 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15560726..15562683 | 322..2279 | 99 | <- | Minus |
3L | 15562743..15563063 | 1..321 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15560726..15562683 | 322..2279 | 99 | <- | Minus |
3L | 15562743..15563063 | 1..321 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15553826..15555783 | 322..2279 | 99 | <- | Minus |
arm_3L | 15555843..15556163 | 1..321 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15553826..15555783 | 322..2279 | 99 | <- | Minus |
3L | 15555843..15556163 | 1..321 | 99 | Minus |
Translation from 128 to 1918
> RE36966.pep MTRCSLVLGLLLALGNLIHASNITDKVFADIKEGIVAAFGDFNSDELTDV FVIRDGMKRLQILFGHYTEPLLKLGPDCQYGDKTIVSVIPGDFDGDALMD VLVNLKGKDEETYEVHINWGNTTELKCSNKSLFTSKGEVMALDFNRDMII DLYGLDSAERRTFWIFNSSRLPPEAVHQAEPTEFKENLSIPNANAYLDLN GDFLADLFLQTKSSYEIWHGINERDKQENFSYQYQIKFQPIGGNDYYIGQ AVFMDFELKGVQNIVVPFCILSNCRNSSIMVHDGTDFRNLHVNFRDPQGV TWAFVPPVSDDVYLRTITARSGDFNLDGYPDLLVTLQPLNVDKPVMQTFL LENVPCTTCNKPLKRTFEVRWNALSPMGNNTVAGAFYDFYQDGVLDVILI RKDGKGKYQPLAFRNTLDYDANFVKVIVLTGLDNKQNPERRTPLGRKKRT YGTNLPGPRITYSTTTQDGDQQCGSSVQLPQASYFALQLPYTCFGLGRTP NFVDQLTVGLGSKLRNWTQLIPNSQIIVVPKPLNEPSHWKAQLFVTPSKL ILMSVVALGGTCLVIVFIILVLYIKEKREDKQERLQESHRFHFDAM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24463-PA | 603 | GF24463-PA | 21..603 | 17..596 | 2598 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13538-PA | 597 | GG13538-PA | 1..597 | 1..596 | 2955 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16812-PA | 594 | GH16812-PA | 17..594 | 19..596 | 2315 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7739-PA | 596 | CG7739-PA | 1..596 | 1..596 | 3153 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12215-PA | 594 | GI12215-PA | 3..594 | 5..596 | 2344 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25540-PA | 598 | GL25540-PA | 18..598 | 17..596 | 2606 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20555-PA | 598 | GA20555-PA | 18..598 | 17..596 | 2601 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24481-PA | 597 | GM24481-PA | 1..597 | 1..596 | 3100 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12554-PA | 598 | GD12554-PA | 1..598 | 1..596 | 3066 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11447-PA | 594 | GJ11447-PA | 16..594 | 18..596 | 2365 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10513-PA | 603 | GK10513-PA | 11..603 | 8..596 | 2459 | 79.3 | Plus |
Translation from 128 to 1918
> RE36966.hyp MTRCSLVLGLLLALGNLIHASNITDKVFADIKEGIVAAFGDFNSDELTDV FVIRDGMKRLQILFGHYTEPLLKLGPDCQYGDKTIVSVIPGDFDGDALMD VLVNLKGKDEETYEVHINWGNTTELKCSNKSLFTSKGEVMALDFNRDMII DLYGLDSAERRTFWIFNSSRLPPEAVHQAEPTEFKENLSIPNANAYLDLN GDFLADLFLQTKSSYEIWHGINERDKQENFSYQYQIKFQPIGGNDYYIGQ AVFMDFELKGVQNIVVPFCILSNCRNSSIMVHDGTDFRNLHVNFRDPQGV TWAFVPPVSDDVYLRTITARSGDFNLDGYPDLLVTLQPLNVDKPVMQTFL LENVPCTTCNKPLKRTFEVRWNALSPMGNNTVAGAFYDFYQDGVLDVILI RKDGKGKYQPLAFRNTLDYDANFVKVIVLTGLDNKQNPERRTPLGRKKRT YGTNLPGPRITYSTTTQDGDQQCGSSVQLPQASYFALQLPYTCFGLGRTP NFVDQLTVGLGSKLRNWTQLIPNSQIIVVPKPLNEPSHWKAQLFVTPSKL ILMSVVALGGTCLVIVFIILVLYIKEKREDKQERLQESHRFHFDAM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7739-PA | 596 | CG7739-PA | 1..596 | 1..596 | 3153 | 100 | Plus |