Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
RE36972.complete Sequence
558 bp (558 high quality bases) assembled on 2003-01-22
GenBank Submission: AY075478
> RE36972.complete
TGGCCAAAAGTGATGGTGCTCGTGGAGTGGATGGGGGGCGGGGGTGGGAG
TAGGTGGCAAGGACGGGGGGCGGGCGTCAATCGGTGCGTAGTTGAGTCGC
GATTGTTATTGTTGCTGCCCCGTTTTCTTGTCCTCCGCCTGCTGATTCCG
GGGACTCAGATGTTTCAGATGTTTCAGATGCTCAGGTGTTCAGTTGCTCT
GGTTCTCCGGTATATTTGGAACTCGAGTCGGCTCTGCGGTCGCCGGATGA
TGACTCCCGATGACAACCGATGACTGATGGATGATGGGCACTAGCTGCTC
CTGCGCCTGCTACTACTTGCTACTTGCCACTTGCAACGGGCTCCTGCTGC
CTAATCCTATGGAATCGGATCCAAACGCTACGCGGTGCACTACTGCTGCT
CTCGCCGACTAAAAAATAGGTGTGACGCGACACGACGCTGCTGGCCAATC
TGCCTTGATTACACTCTCAATTTAAATGACCGTTTTCCATATTTTTTTTT
AATTTTTTTTTATACATTACATTAAAAGAGTTTCTCGATACCAAAAAAAA
AAAAAAAA
RE36972.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:44:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14435-RA | 2774 | CG14435-RA | 48..589 | 544..3 | 2695 | 99.8 | Minus |
CG14435-RB | 3625 | CG14435-RB | 23..564 | 544..3 | 2695 | 99.8 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:09:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 6735539..6736086 | 3..540 | 2490 | 97.8 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:52:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:09:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6843357..6843898 | 3..544 | 2695 | 99.8 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:24:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 6851455..6851996 | 3..544 | 2695 | 99.8 | Plus |
Blast to na_te.dros performed on 2019-03-16 19:09:10 has no hits.
RE36972.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:09:50 Download gff for
RE36972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 6735536..6736088 | 1..542 | 97 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:15:44 Download gff for
RE36972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5214-RA | 487..504 | 294..311 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:43:21 Download gff for
RE36972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14435-RA | 25..565 | 1..542 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:32:16 Download gff for
RE36972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14435-RB | 25..565 | 1..542 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:23:50 Download gff for
RE36972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14435-RA | 26..566 | 1..542 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:15:44 Download gff for
RE36972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14435-RA | 1..309 | 1..310 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:01:51 Download gff for
RE36972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14435-RA | 26..566 | 1..542 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:09:50 Download gff for
RE36972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6843354..6843896 | 1..542 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:09:50 Download gff for
RE36972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6843354..6843896 | 1..542 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:09:50 Download gff for
RE36972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6843354..6843896 | 1..542 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:23:50 Download gff for
RE36972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6737387..6737929 | 1..542 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:23:50 Download gff for
RE36972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6737387..6737929 | 1..542 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:36:31 Download gff for
RE36972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6851452..6851994 | 1..542 | 99 | | Plus |
RE36972.hyp Sequence
Translation from 0 to 272
> RE36972.hyp
VPKVMVLVEWMGGGGGSRWQGRGAGVNRCVVESRLLLLLPRFLVLRLLIP
GTQMFQMFQMLRCSVALVLRYIWNSSRLCGRRMMTPDDNR*
Sequence RE36972.hyp has no blast hits.
RE36972.pep Sequence
Translation from 12 to 272
> RE36972.pep
MVLVEWMGGGGGSRWQGRGAGVNRCVVESRLLLLLPRFLVLRLLIPGTQM
FQMFQMLRCSVALVLRYIWNSSRLCGRRMMTPDDNR*
Sequence RE36972.pep has no blast hits.