Clone RE37047 Report

Search the DGRC for RE37047

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:370
Well:47
Vector:pFlc-1
Associated Gene/TranscriptActbeta-RA
Protein status:RE37047.pep: gold
Sequenced Size:3677

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11062 2002-01-01 Sim4 clustering to Release 2
CG11062 2002-06-10 Blastp of sequenced clone
CG11062 2003-01-01 Sim4 clustering to Release 3
activin-beta 2008-04-29 Release 5.5 accounting
activin-beta 2008-08-15 Release 5.9 accounting
Actbeta 2008-12-18 5.12 accounting

Clone Sequence Records

RE37047.complete Sequence

3677 bp (3677 high quality bases) assembled on 2002-06-10

GenBank Submission: AY121686

> RE37047.complete
AGTTTCACAAAGTATGCAATGTCATTTAGCAACCAACGGAGATACAAAAT
ATTGTTTCCGTGCTAAAAGGAAAAGCATAATACATTTATAAATCGTGAAA
ATGTGATAGTGTCCCTAATATTTCTCGTGAAGAAATATATTTACTTAGTT
GAAAATTTATTGTTTCTAAAAAGAAAAAGGCAGACGAAATGAACGACAGA
AAGGAAAGGAAAGGAAAAAGATTTGCAATGATTAAAAAAATATTTACCAG
AAAAATAAAATTGACAATACTTGTACCACGTTTCTAAGGGACAGTGCCTG
TACTACACGCTTGCCATATATCAAAGATGCGATTTGCCTTCGATTCTAAT
CATTCGCAATCGGGGGCGCCATTCAAAGGCAGCAGGTGTTTCTTTAATTG
TCAATGCATCTGCTGTCGCCAAGGATGCTGCGTTGTGGTTGTAAAGTGCT
GTTGCTGCTTTAACTTAAACTGCTGCAACAGCCTTGGCTCCCGGAAGTCA
TTTCCACAACCCGCTGCAATGCGTAAAAAAGTTGCTGACCTCGAAGTCCT
TAGAGTATCAAGGTTTGTGGCGGTTATTTTAGTGCTGGCTCGGTGGGTTA
CTGCGGTAGCGACACTCCTGACAAGCTGCATACTCCTAGACATATTTTCC
GTGCCTGGCCAGTCTGGAGTTGCAGATAGAAGCCAAGCCAGCAGTAGGAC
AGTGCACGTCTCGGTTCCTACCACACCTAATGAAACTCCCAGTAGCACTT
CGGAGACGAAGCTAAAGTTGCTTTATGGGTATACATCGTATGACATAAAT
AACGACCAACAGGTAAAGTCCAACAATTTATGTAGAGTGCTTTGTAAAAG
TCGCAATCGTAAACGACAGCGAAGGAGGCGACGCCGACGCAATCACAGAC
GACGCAGGCACAGATATACTAAGCGACTTCATCATCTAATGCAAGATAAT
ATGAGCGGCTTTGAGCAAAGACTTAATTTTAGCGATGCCAAATGCCAGTC
TTTGGAGACAAATTACGGAACTAATTATGACTTAGTACAAGGAGGTAAAC
TATTTAGTCAGTCAGAGAGAAGCCTACTGGTGTCCCCTTTGAGGGAAATT
GAAGCACCTTGGCCAGCGATTCATGGTTCAATGCGTAACTGTTCAAAGAT
TAAACGCAATAGAGCCAATCTTATTTGGCTTCTAATTGGACTCGTCTGGT
TTGAAGTCAAACTTATAAATTGCAATGGGATCAGCAGTAGTAATTATTAT
GCTTCGAATTTGGAGAGTCACAAGGGCTGCACCTTGTGCCATGAAAGCGG
AAAGCCCAACATATACACCGATAAAGATAATCCACACACAGACTACAACA
TCTACAACAAATACCATTCCAACAATAATTTCAACAAAAAAACTAATCAA
CCCCATAACAACATTGCACCCAGCGATGAAGTTCGTTTGGAGTCAATAAA
ACGGCAAATTTTGACAAAGCTTGGTCTTAGCCACAAGCCTAATGTATCTC
ATCCTTTACCAAAGCAATTTATTTGGGAAACAATATATCGAGTCGATGGT
GGACGAATGATACCAAACAATGCATTTGGGAGCAGTGGTAAGAATTTAGA
TCAGAAGACTATCAAGCTGAGGGCGTTTGCCTCGCCCGGATCACATTTGT
TTAATGGCCGAGGTGGAAGGACCGATCAGAGAAGCGAACGGGATCCCAGT
CATCATAAATATCGATCCCCGTTCGATTTCACTTTCAATATAAGTAAAAA
TAATGTATATGGGAAAGTATTGAGAAATCGTTCTTTAGAACGAATCGATA
AAAAAAACTCATTCTTAAACGGATGGACAGAAAACCGTCAATTAAAAATA
AACTCTCAAATTGCATCTATGCCTATAGAACTAAAGAGCCACCATAACAG
TAGTCCTAAGGAGCTTAAAAGCGGAGCGGTCAGAAAAGTTAATGGCATCA
ACGGCACACAAATGAATGAGAATGCCTTAAAAAAATCTACATATCCTATA
GATATAAATCATAGTATTGATAATAAAACCCATACTGGCAAAAATGGTGA
GATGAGCCACAATGATTATGAATATTTTAACGATTACAGTGTTCAGACTC
ATGATAAAAACCGGTACCATGAAGGTCGCTCTAGCATTGGATATCAGCCA
GCGATCCACAACATAGAATATGAAAATCAGAAAGGACATCACGAATCTTT
TGCTGATGATCATGAAAATATTGATCATGAAGACTTCTTTGGAAATACGC
AGGAAATAATTACATTTGCTGAAGAGGGAACCCAATATCGACAATATCGA
ATACTCGAGTTTTCGGCCCAAAACCGCCGTGTTCCCAGCCAAAAATTATC
CATACGAAGCGCTCAGATTCATATAAGGATAGACAAGCCACATAGTCTTT
GGATTGAAAAAGCAAAAAGTTTGCCAGAAAAACATTTACTAAACACTAAA
CGAAAATGGGGAGCAAATAAACCACATCACAGAATAAAAATATGGGTATT
TCAGTTATCAACTTCAATCAATATTACGGAGAAGGGAATAGATAAGGCTA
TTATCTTCCGAGCTTCTTTTCAAGTTGACCCGAAAAATTTAGGATGGCAA
AAATTCGATTTAACCGATACAATCCGTGAATGGTACGGCCATACCAGTCA
CGAAAAACTGCGTTTGTTGATTGATTGTACTGGATGCGGTGGTCGTTACT
CTTTGCACCTCTTTCAAACTTCGAAACTGAGAGGAAACTCATCCGACTAC
TTGAGTACGAATCCCAATCGACCATTTCTCGTACTTCATACAGAATCATC
CAGAACAAGGCGTGTTAGGCGACGCGCCGTAGATTGTGGCGGAGCTTTAA
ATGGACAGTGCTGTAAAGAATCTTTTTATGTTTCTTTCAAAGCACTAGGT
TGGGATGACTGGATTATTGCACCCAGAGGATATTTTGCAAACTATTGCCG
AGGCGATTGCACGGGCTCTTTTAGGACGCCAGACACTTTCCAAACATTTC
ATGCTCATTTTATAGAGGAGTATCGGAAAATGGGACTTATGAATGGAATG
CGACCGTGTTGCGCCCCAATAAAATTCTCTAGTATGTCCTTAATATATTA
TGGTGATGATGGTATTATTAAACGAGACTTGCCAAAAATGGTTGTTGATG
AGTGTGGTTGCCCTTAGCCTTGCCTTACAATTTTATATTTTCCGTCCGAT
AGAAATAAAAATATATGTGTCCTAACTGAGCGCCAATCTCTTAACGAAAT
CTTTTACTTTTAAGTTAAAAGTACATAAATATATACATAAAGTAGACTCA
ATTTTATTTTATACTTAGCTATGCTGGTGACAATATTTGTATATTTACGA
ACAAATCCAAATTGAGGAAGTGCCTAAATTACGTTAATGAAATATTTGTA
CATTTTAAGAATATTTCAAAAATCACTAAAATATCTTTGTACTAATAAAA
TTCGATATTTTTAATTATTACTTTATTTAATATGTTCAAATTAACATAAG
TATAAAACGAAATGATTTAATAACCTATAACATGAGCAAAGCGTCGCGCT
TTTTTTATTGTCAAAACATTAATTTTACTAACTTGAAAAGCTTATATCAC
AGACATGTAATAAATATTTCATATTACAGTTTAATAAAGTATTAATATAA
GGATTACTATATGAAATAAAAAAAAAA

RE37047.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:50:00
Subject Length Description Subject Range Query Range Score Percent Strand
Actbeta-RA 3681 Actbeta-RA 4..3678 1..3675 18360 99.9 Plus
Actbeta.a 3893 Actbeta.a 216..3890 1..3675 18360 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:43:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr4 1351717 chr4 1102619..1103760 1326..178 5590 99.3 Minus
chr4 1351717 chr4 1100748..1101701 2278..1325 4755 99.9 Minus
chr4 1351717 chr4 1098378..1099013 3168..2533 3180 100 Minus
chr4 1351717 chr4 1097823..1098321 3667..3169 2495 100 Minus
chr4 1351717 chr4 1099064..1099322 2535..2277 1295 100 Minus
chr4 1351717 chr4 1105098..1105277 180..1 900 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:52:52 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:43:44
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 1082127..1083275 1326..178 5745 100 Minus
4 1348131 4 1080256..1081209 2278..1325 4770 100 Minus
4 1348131 4 1077886..1078521 3168..2533 3180 100 Minus
4 1348131 4 1077323..1077829 3675..3169 2520 99.8 Minus
4 1348131 4 1078572..1078830 2535..2277 1295 100 Minus
4 1348131 4 1084613..1084792 180..1 900 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:22:43
Subject Length Description Subject Range Query Range Score Percent Strand
4 1331231 4 1082127..1083275 1326..178 5745 100 Minus
4 1331231 4 1080256..1081209 2278..1325 4770 100 Minus
4 1331231 4 1077886..1078521 3168..2533 3180 100 Minus
4 1331231 4 1077323..1077829 3675..3169 2520 99.8 Minus
4 1331231 4 1078572..1078830 2535..2277 1295 100 Minus
4 1331231 4 1084613..1084792 180..1 900 100 Minus
Blast to na_te.dros performed 2019-03-15 22:43:45
Subject Length Description Subject Range Query Range Score Percent Strand
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 868..998 3530..3391 155 62.1 Minus
Stalker4 7359 Stalker4 STALKER4 7359bp 6611..6944 3262..3622 153 56.7 Plus
Stalker 7256 Stalker STALKER 7256bp 6505..6842 3262..3616 142 54.7 Plus
roo 9092 roo DM_ROO 9092bp 1057..1153 497..398 132 62 Minus

RE37047.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:44:51 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
chr4 1105099..1105277 1..179 100   Minus
chr4 1097823..1098321 3169..3667 100 <- Minus
chr4 1098378..1099011 2535..3168 100 <- Minus
chr4 1099065..1099321 2278..2534 100 <- Minus
chr4 1100749..1101699 1327..2277 99 <- Minus
chr4 1102619..1103758 180..1326 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:13:01 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
Actbeta-RA 1..2841 327..3167 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:25:48 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
Actbeta-RA 1..2841 327..3167 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:31:03 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
Actbeta-RA 1..2841 327..3167 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:16:17 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
activin-beta-RA 1..2841 327..3167 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:33:30 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
Actbeta-RA 1..2841 327..3167 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:53:53 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
Actbeta-RA 1..3667 1..3667 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:25:48 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
Actbeta-RA 1..3667 1..3667 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:31:03 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
Actbeta-RA 5..3671 1..3667 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:16:17 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
activin-beta-RA 1..3667 1..3667 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:33:30 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
Actbeta-RA 5..3671 1..3667 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:44:51 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
4 1084614..1084792 1..179 100   Minus
4 1077331..1077829 3169..3667 100 <- Minus
4 1077886..1078519 2535..3168 100 <- Minus
4 1078573..1078829 2278..2534 100 <- Minus
4 1080257..1081207 1327..2277 100 <- Minus
4 1082127..1083273 180..1326 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:44:51 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
4 1084614..1084792 1..179 100   Minus
4 1077331..1077829 3169..3667 100 <- Minus
4 1077886..1078519 2535..3168 100 <- Minus
4 1078573..1078829 2278..2534 100 <- Minus
4 1080257..1081207 1327..2277 100 <- Minus
4 1082127..1083273 180..1326 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:44:51 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
4 1084614..1084792 1..179 100   Minus
4 1077331..1077829 3169..3667 100 <- Minus
4 1077886..1078519 2535..3168 100 <- Minus
4 1078573..1078829 2278..2534 100 <- Minus
4 1080257..1081207 1327..2277 100 <- Minus
4 1082127..1083273 180..1326 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:31:03 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
arm_4 1097957..1098455 3169..3667 100 <- Minus
arm_4 1098512..1099145 2535..3168 100 <- Minus
arm_4 1099199..1099455 2278..2534 100 <- Minus
arm_4 1100883..1101833 1327..2277 100 <- Minus
arm_4 1102753..1103899 180..1326 100 <- Minus
arm_4 1105240..1105418 1..179 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:49:33 Download gff for RE37047.complete
Subject Subject Range Query Range Percent Splice Strand
4 1077331..1077829 3169..3667 100 <- Minus
4 1077886..1078519 2535..3168 100 <- Minus
4 1078573..1078829 2278..2534 100 <- Minus
4 1080257..1081207 1327..2277 100 <- Minus
4 1082127..1083273 180..1326 100 <- Minus
4 1084614..1084792 1..179 100   Minus

RE37047.pep Sequence

Translation from 326 to 3166

> RE37047.pep
MRFAFDSNHSQSGAPFKGSRCFFNCQCICCRQGCCVVVVKCCCCFNLNCC
NSLGSRKSFPQPAAMRKKVADLEVLRVSRFVAVILVLARWVTAVATLLTS
CILLDIFSVPGQSGVADRSQASSRTVHVSVPTTPNETPSSTSETKLKLLY
GYTSYDINNDQQVKSNNLCRVLCKSRNRKRQRRRRRRRNHRRRRHRYTKR
LHHLMQDNMSGFEQRLNFSDAKCQSLETNYGTNYDLVQGGKLFSQSERSL
LVSPLREIEAPWPAIHGSMRNCSKIKRNRANLIWLLIGLVWFEVKLINCN
GISSSNYYASNLESHKGCTLCHESGKPNIYTDKDNPHTDYNIYNKYHSNN
NFNKKTNQPHNNIAPSDEVRLESIKRQILTKLGLSHKPNVSHPLPKQFIW
ETIYRVDGGRMIPNNAFGSSGKNLDQKTIKLRAFASPGSHLFNGRGGRTD
QRSERDPSHHKYRSPFDFTFNISKNNVYGKVLRNRSLERIDKKNSFLNGW
TENRQLKINSQIASMPIELKSHHNSSPKELKSGAVRKVNGINGTQMNENA
LKKSTYPIDINHSIDNKTHTGKNGEMSHNDYEYFNDYSVQTHDKNRYHEG
RSSIGYQPAIHNIEYENQKGHHESFADDHENIDHEDFFGNTQEIITFAEE
GTQYRQYRILEFSAQNRRVPSQKLSIRSAQIHIRIDKPHSLWIEKAKSLP
EKHLLNTKRKWGANKPHHRIKIWVFQLSTSINITEKGIDKAIIFRASFQV
DPKNLGWQKFDLTDTIREWYGHTSHEKLRLLIDCTGCGGRYSLHLFQTSK
LRGNSSDYLSTNPNRPFLVLHTESSRTRRVRRRAVDCGGALNGQCCKESF
YVSFKALGWDDWIIAPRGYFANYCRGDCTGSFRTPDTFQTFHAHFIEEYR
KMGLMNGMRPCCAPIKFSSMSLIYYGDDGIIKRDLPKMVVDECGCP*

RE37047.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:58:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20147-PA 249 GF20147-PA 40..249 733..946 978 82.2 Plus
Dana\GF14981-PA 593 GF14981-PA 401..592 738..945 278 30.7 Plus
Dana\GF20585-PA 460 GF20585-PA 356..459 842..945 188 33.3 Plus
Dana\GF19974-PA 122 GF19974-PA 13..121 828..945 154 30.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:58:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16419-PA 967 GG16419-PA 1..967 1..946 4112 84.7 Plus
Dere\GG24887-PA 589 GG24887-PA 412..588 757..945 241 29.5 Plus
Dere\dpp-PA 583 GG24858-PA 479..582 842..945 193 34.2 Plus
Dere\GG22893-PA 455 GG22893-PA 354..454 845..945 182 34.3 Plus
Dere\GG16438-PA 598 GG16438-PA 467..597 805..945 179 30.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:58:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23969-PA 962 GH23969-PA 1..962 1..946 2100 50.8 Plus
Dgri\GH13255-PA 539 GH13255-PA 362..538 757..945 271 29.9 Plus
Dgri\GH21685-PA 440 GH21685-PA 339..439 845..945 185 36.1 Plus
Dgri\GH10263-PA 475 GH10263-PA 374..474 845..945 180 33.3 Plus
Dgri\GH13052-PA 360 GH13052-PA 155..359 756..945 178 27.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:14
Subject Length Description Subject Range Query Range Score Percent Strand
Actbeta-PA 946 CG11062-PA 1..946 1..946 5121 100 Plus
daw-PC 586 CG16987-PC 409..585 757..945 252 29.5 Plus
daw-PA 586 CG16987-PA 409..585 757..945 252 29.5 Plus
daw-PB 586 CG16987-PB 409..585 757..945 252 29.5 Plus
dpp-PA 588 CG9885-PA 487..587 845..945 182 35.2 Plus
dpp-PE 588 CG9885-PE 487..587 845..945 182 35.2 Plus
dpp-PC 588 CG9885-PC 487..587 845..945 182 35.2 Plus
dpp-PB 588 CG9885-PB 487..587 845..945 182 35.2 Plus
gbb-PB 455 CG5562-PB 354..454 845..945 175 34.3 Plus
gbb-PA 455 CG5562-PA 354..454 845..945 175 34.3 Plus
myo-PD 598 CG1838-PD 467..597 805..945 167 30.1 Plus
myo-PC 598 CG1838-PC 467..597 805..945 167 30.1 Plus
myo-PA 598 CG1838-PA 467..597 805..945 167 30.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:58:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14097-PA 859 GI14097-PA 478..859 563..946 1297 64.4 Plus
Dmoj\GI14097-PA 859 GI14097-PA 15..434 10..417 556 42.7 Plus
Dmoj\GI17297-PA 578 GI17297-PA 401..577 757..945 266 29.4 Plus
Dmoj\GI18839-PA 396 GI18839-PA 295..395 845..945 186 36.1 Plus
Dmoj\GI14061-PA 395 GI14061-PA 264..394 805..945 176 30.8 Plus
Dmoj\GI15572-PA 451 GI15572-PA 350..450 845..945 170 32.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:58:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18379-PA 757 GL18379-PA 4..757 18..748 1569 53 Plus
Dper\GL15444-PA 599 GL15444-PA 391..598 722..945 274 28.4 Plus
Dper\GL18380-PA 45 GL18380-PA 1..45 902..946 264 95.6 Plus
Dper\GL26560-PA 596 GL26560-PA 495..595 845..945 190 34.3 Plus
Dper\GL18137-PA 617 GL18137-PA 486..616 805..945 183 31.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:58:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10734-PA 959 GA10734-PA 4..959 18..946 2476 59.4 Plus
Dpse\GA28802-PA 453 GA28802-PA 276..452 757..945 273 29.9 Plus
Dpse\dpp-PA 584 GA22099-PA 483..583 845..945 190 34.3 Plus
Dpse\GA18973-PA 459 GA18973-PA 343..458 813..945 183 30.6 Plus
Dpse\GA14914-PA 617 GA14914-PA 486..616 805..945 183 31.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:58:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13010-PA 948 GM13010-PA 1..948 1..946 4465 92.6 Plus
Dsec\GM18367-PA 586 GM18367-PA 409..585 757..945 241 29.5 Plus
Dsec\GM26771-PA 598 GM26771-PA 467..597 805..945 182 31.5 Plus
Dsec\GM16052-PA 455 GM16052-PA 354..454 845..945 180 34.3 Plus
Dsec\GM18343-PA 583 GM18343-PA 487..582 842..945 180 32.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:58:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17844-PA 295 GD17844-PA 1..295 1..296 1191 90.5 Plus
Dsim\GD23183-PA 586 GD23183-PA 409..585 757..945 241 29.5 Plus
Dsim\dpp-PA 455 GD23157-PA 351..454 842..945 192 34.2 Plus
Dsim\GD11802-PA 455 GD11802-PA 354..454 845..945 180 34.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:58:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20145-PA 926 GJ20145-PA 3..926 1..946 1987 49.4 Plus
Dvir\GJ17906-PA 572 GJ17906-PA 395..571 757..945 266 29.8 Plus
Dvir\gbb-PA 396 GJ21867-PA 295..395 845..945 184 35.2 Plus
Dvir\dpp-PA 503 GJ17292-PA 402..502 845..945 172 32.4 Plus
Dvir\GJ18497-PA 650 GJ18497-PA 519..649 805..945 171 30.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:58:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13706-PA 901 GK13706-PA 1..901 1..946 2043 49.5 Plus
Dwil\GK24277-PA 592 GK24277-PA 360..591 691..945 280 27.8 Plus
Dwil\GK13592-PA 432 GK13592-PA 305..431 812..945 191 31.9 Plus
Dwil\GK15709-PA 457 GK15709-PA 356..456 845..945 185 35.3 Plus
Dwil\GK23940-PA 603 GK23940-PA 502..602 845..945 171 32.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:58:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14488-PA 961 GE14488-PA 1..961 1..946 4130 85.3 Plus
Dyak\GE18181-PA 590 GE18181-PA 413..589 757..945 241 29.5 Plus
Dyak\dpp-PA 450 GE18157-PA 346..449 842..945 193 34.2 Plus
Dyak\GE14331-PA 456 GE14331-PA 355..455 845..945 180 34.3 Plus
Dyak\GE14505-PA 583 GE14505-PA 452..582 805..945 177 30.8 Plus

RE37047.hyp Sequence

Translation from 326 to 3166

> RE37047.hyp
MRFAFDSNHSQSGAPFKGSRCFFNCQCICCRQGCCVVVVKCCCCFNLNCC
NSLGSRKSFPQPAAMRKKVADLEVLRVSRFVAVILVLARWVTAVATLLTS
CILLDIFSVPGQSGVADRSQASSRTVHVSVPTTPNETPSSTSETKLKLLY
GYTSYDINNDQQVKSNNLCRVLCKSRNRKRQRRRRRRRNHRRRRHRYTKR
LHHLMQDNMSGFEQRLNFSDAKCQSLETNYGTNYDLVQGGKLFSQSERSL
LVSPLREIEAPWPAIHGSMRNCSKIKRNRANLIWLLIGLVWFEVKLINCN
GISSSNYYASNLESHKGCTLCHESGKPNIYTDKDNPHTDYNIYNKYHSNN
NFNKKTNQPHNNIAPSDEVRLESIKRQILTKLGLSHKPNVSHPLPKQFIW
ETIYRVDGGRMIPNNAFGSSGKNLDQKTIKLRAFASPGSHLFNGRGGRTD
QRSERDPSHHKYRSPFDFTFNISKNNVYGKVLRNRSLERIDKKNSFLNGW
TENRQLKINSQIASMPIELKSHHNSSPKELKSGAVRKVNGINGTQMNENA
LKKSTYPIDINHSIDNKTHTGKNGEMSHNDYEYFNDYSVQTHDKNRYHEG
RSSIGYQPAIHNIEYENQKGHHESFADDHENIDHEDFFGNTQEIITFAEE
GTQYRQYRILEFSAQNRRVPSQKLSIRSAQIHIRIDKPHSLWIEKAKSLP
EKHLLNTKRKWGANKPHHRIKIWVFQLSTSINITEKGIDKAIIFRASFQV
DPKNLGWQKFDLTDTIREWYGHTSHEKLRLLIDCTGCGGRYSLHLFQTSK
LRGNSSDYLSTNPNRPFLVLHTESSRTRRVRRRAVDCGGALNGQCCKESF
YVSFKALGWDDWIIAPRGYFANYCRGDCTGSFRTPDTFQTFHAHFIEEYR
KMGLMNGMRPCCAPIKFSSMSLIYYGDDGIIKRDLPKMVVDECGCP*

RE37047.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:18:02
Subject Length Description Subject Range Query Range Score Percent Strand
Actbeta-PA 946 CG11062-PA 1..946 1..946 5121 100 Plus
daw-PC 586 CG16987-PC 409..585 757..945 252 29.5 Plus
daw-PA 586 CG16987-PA 409..585 757..945 252 29.5 Plus
daw-PB 586 CG16987-PB 409..585 757..945 252 29.5 Plus
dpp-PA 588 CG9885-PA 487..587 845..945 182 35.2 Plus