BDGP Sequence Production Resources |
Search the DGRC for RE37350
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 373 |
Well: | 50 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG17683-RA |
Protein status: | RE37350.pep: gold |
Preliminary Size: | 1424 |
Sequenced Size: | 1749 |
Gene | Date | Evidence |
---|---|---|
CG17683 | 2001-12-14 | Blastp of sequenced clone |
CG17683 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17683 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17683 | 2008-04-29 | Release 5.5 accounting |
CG17683 | 2008-08-15 | Release 5.9 accounting |
CG17683 | 2008-12-18 | 5.12 accounting |
1749 bp (1749 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071338
> RE37350.complete TTCCACAATTACCGCTATGTTTTGACGATAGCTTGGCTCACTGCACTAAA TATTTGAATAAGTTCAGAAAGCGGTTTGGTGAATATATAAAATAAAAAAG TTAAATATTATTTATTACGAAAACCATGTCGAGGTTGAGCAGAGCGCTGC AGCTTACAGATATAGATGATTTTATTACGCCCTCACAGATATGCATTAAG CCCGTGCAAATAGATAAGGCAAGGTCAAAGACTGGGGCAAAGATAAAGAT AAAAGGTGACGGCTGCTTTGAGGAATCAGAGAGTGGAAATCTAAAACTTA ATAAAGTTGATATTTCTCTGCAAGACTGTCTTGCGTGTTCTGGTTGCATC ACTTCAGCTGAAGAAGTCCTTATCACGCAGCAGAGCCGAGAAGAGTTGCT TAAGGTCCTTCAAGAGAATTCAAAGAATAAGGCCTCTGAAGACTGGGATA ACGTGCGTACGATCGTGTTCACCCTTGCCACCCAGCCTATACTAAGCTTA GCCTATCGCTATCAGATAGGTGTGGAGGATGCTGCCCGTCATCTTAATGG GTATTTTCGCAGTTTGGGTGCCGACTATGTTTTGTCCACTAAGGTGGCGG ACGATATTGCGCTGCTCGAATGTCGTCAAGAATTTGTAGATAGGTACCGC GAAAATGAGAACTTGACCATGCTTAGCTCCTCTTGTCCGGGGTGGGTTTG TTACGCGGAGAAAACACACGGAAACTTCTTATTGCCTTACGTTTCCACGA CCCGATCTCCTCAGCAAATAATGGGAGTGCTTGTGAAGCAAATCCTTGCC GATAAGATGAATGTTCCTGCGTCACGAATCTACCATGTGACCGTGATGCC TTGCTACGACAAGAAGCTTGAGGCCTCTCGAGAGGACTTTTTCAGCAAGG CAAATAACTCACGCGACGTAGACTGTGTAATCACTTCAGTTGAGGTGGAA CAGTTGCTTAGTGAGGCTCAGCAGCCGCTGTCGCAGTACGATCTCCTTGA TTTAGACTGGCCATGGTCTAATGTACGCCCAGAATTCATGGTATGGGCTC ACGAGAAGACGCTATCTGGCGGTTACGCAGAACACATATTTAAGTACGCC GCAAAACATATTTTCAACGAAGATTTAAAAACAGAGTTGGAATTCAAACA GCTCAAAAACCGCGACTTTAGAGAAATTATACTTAAACAGAATGGCAAAA CTGTCCTGAAATTTGCAATTGCTAACGGTTTCCGGAACATACAAAACTTG GTACAAAAACTGAAGCGTGAAAAGGTATCAAATTACCACTTTGTTGAGGT AATGGCCTGTCCCTCGGGCTGTATAAACGGAGGAGCACAAATACGTCCCA CTACCGGACAGCACGTTCGCGAGCTTACCCGGAAACTGGAGGAATTATAC CAGAATCTTCCACGGTCCGAACCCGAAAACTCCTTAACAAAACATATTTA CAATGACTTTTTAGACGGCTTTCAAAGTGATAAATCATATGACGTGCTGC ACACCCGTTACCATGATGTAGTATCTGAGCTCAGTATATCGCTTAATATA AATTGGTAAACGTATTGTGCTTGATTATCTCTTTTAGTATATCGACAGTT TCGGTAAAGGAATAAGGCCCACAAACAAATATTTAAAATTAAAAAAAAAA ACTCATTTAAACGGGGTGAGATTAGTGACAATACCGTTTTAAACCCAAAA ACTGTATGAATAACGAATAATATGATAAAATAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17683.e | 2478 | CG17683.e | 46..1778 | 1..1734 | 8630 | 99.9 | Plus |
CG17683-RA | 2046 | CG17683-RA | 46..1778 | 1..1734 | 8630 | 99.9 | Plus |
CG17683-RC | 1854 | CG17683-RC | 187..1722 | 199..1734 | 7680 | 100 | Plus |
CG17683-RC | 1854 | CG17683-RC | 2..188 | 1..188 | 900 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19538..20334 | 937..1733 | 3985 | 100 | Plus |
chr2R | 21145070 | chr2R | 18824..19483 | 280..939 | 3300 | 100 | Plus |
chr2R | 21145070 | chr2R | 18442..18628 | 1..188 | 890 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 18677..18772 | 186..281 | 480 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 4132034..4132831 | 937..1734 | 3990 | 100 | Plus |
2R | 25286936 | 2R | 4131320..4131979 | 280..939 | 3300 | 100 | Plus |
2R | 25286936 | 2R | 4130938..4131124 | 1..188 | 890 | 99.5 | Plus |
2R | 25286936 | 2R | 4131173..4131268 | 186..281 | 480 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 4133233..4134030 | 937..1734 | 3990 | 100 | Plus |
2R | 25260384 | 2R | 4132519..4133178 | 280..939 | 3300 | 100 | Plus |
2R | 25260384 | 2R | 4132137..4132323 | 1..188 | 900 | 99.4 | Plus |
2R | 25260384 | 2R | 4132372..4132467 | 186..281 | 480 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tabor | 7345 | Tabor TABOR 7345bp | 2352..2448 | 359..264 | 122 | 59.8 | Minus |
blood | 7410 | blood BLOOD 7410bp | 6911..6948 | 121..86 | 122 | 84.2 | Minus |
invader3 | 5484 | invader3 INVADER3 5484bp | 1846..1893 | 67..115 | 116 | 73.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 18442..18628 | 1..188 | 99 | -> | Plus |
chr2R | 18680..18772 | 189..281 | 100 | -> | Plus |
chr2R | 18826..19483 | 282..939 | 100 | -> | Plus |
chr2R | 19541..20334 | 940..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17683-RA | 1..1434 | 126..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17683-RA | 1..1434 | 126..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17683-RA | 1..1434 | 126..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17683-RA | 1..1434 | 126..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17683-RA | 1..1434 | 126..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17683-RA | 2..1733 | 1..1733 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17683-RA | 2..1733 | 1..1733 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17683-RA | 1..1696 | 37..1733 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17683-RA | 2..1733 | 1..1733 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17683-RA | 1..1696 | 37..1733 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 4131176..4131268 | 189..281 | 100 | -> | Plus |
2R | 4130938..4131124 | 1..188 | 99 | -> | Plus |
2R | 4131322..4131979 | 282..939 | 100 | -> | Plus |
2R | 4132037..4132830 | 940..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 4131176..4131268 | 189..281 | 100 | -> | Plus |
2R | 4130938..4131124 | 1..188 | 99 | -> | Plus |
2R | 4131322..4131979 | 282..939 | 100 | -> | Plus |
2R | 4132037..4132830 | 940..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 4131176..4131268 | 189..281 | 100 | -> | Plus |
2R | 4130938..4131124 | 1..188 | 99 | -> | Plus |
2R | 4131322..4131979 | 282..939 | 100 | -> | Plus |
2R | 4132037..4132830 | 940..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 18443..18629 | 1..188 | 99 | -> | Plus |
arm_2R | 18681..18773 | 189..281 | 100 | -> | Plus |
arm_2R | 18827..19484 | 282..939 | 100 | -> | Plus |
arm_2R | 19542..20335 | 940..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 4132521..4133178 | 282..939 | 100 | -> | Plus |
2R | 4133236..4134029 | 940..1733 | 100 | Plus | |
2R | 4132137..4132323 | 1..188 | 99 | -> | Plus |
2R | 4132375..4132467 | 189..281 | 100 | -> | Plus |
Translation from 125 to 1558
> RE37350.hyp MSRLSRALQLTDIDDFITPSQICIKPVQIDKARSKTGAKIKIKGDGCFEE SESGNLKLNKVDISLQDCLACSGCITSAEEVLITQQSREELLKVLQENSK NKASEDWDNVRTIVFTLATQPILSLAYRYQIGVEDAARHLNGYFRSLGAD YVLSTKVADDIALLECRQEFVDRYRENENLTMLSSSCPGWVCYAEKTHGN FLLPYVSTTRSPQQIMGVLVKQILADKMNVPASRIYHVTVMPCYDKKLEA SREDFFSKANNSRDVDCVITSVEVEQLLSEAQQPLSQYDLLDLDWPWSNV RPEFMVWAHEKTLSGGYAEHIFKYAAKHIFNEDLKTELEFKQLKNRDFRE IILKQNGKTVLKFAIANGFRNIQNLVQKLKREKVSNYHFVEVMACPSGCI NGGAQIRPTTGQHVRELTRKLEELYQNLPRSEPENSLTKHIYNDFLDGFQ SDKSYDVLHTRYHDVVSELSISLNINW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17683-PA | 477 | CG17683-PA | 1..477 | 1..477 | 2484 | 100 | Plus |
CG17683-PC | 473 | CG17683-PC | 1..473 | 1..477 | 2447 | 99.2 | Plus |
CG17683-PD | 430 | CG17683-PD | 5..430 | 52..477 | 2223 | 99.8 | Plus |
CG17683-PE | 296 | CG17683-PE | 1..296 | 182..477 | 1567 | 100 | Plus |
Translation from 125 to 1558
> RE37350.pep MSRLSRALQLTDIDDFITPSQICIKPVQIDKARSKTGAKIKIKGDGCFEE SESGNLKLNKVDISLQDCLACSGCITSAEEVLITQQSREELLKVLQENSK NKASEDWDNVRTIVFTLATQPILSLAYRYQIGVEDAARHLNGYFRSLGAD YVLSTKVADDIALLECRQEFVDRYRENENLTMLSSSCPGWVCYAEKTHGN FLLPYVSTTRSPQQIMGVLVKQILADKMNVPASRIYHVTVMPCYDKKLEA SREDFFSKANNSRDVDCVITSVEVEQLLSEAQQPLSQYDLLDLDWPWSNV RPEFMVWAHEKTLSGGYAEHIFKYAAKHIFNEDLKTELEFKQLKNRDFRE IILKQNGKTVLKFAIANGFRNIQNLVQKLKREKVSNYHFVEVMACPSGCI NGGAQIRPTTGQHVRELTRKLEELYQNLPRSEPENSLTKHIYNDFLDGFQ SDKSYDVLHTRYHDVVSELSISLNINW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22738-PA | 476 | GF22738-PA | 1..476 | 1..477 | 1836 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21400-PA | 477 | GG21400-PA | 1..477 | 1..477 | 2265 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10760-PA | 476 | GH10760-PA | 1..476 | 1..477 | 1891 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17683-PA | 477 | CG17683-PA | 1..477 | 1..477 | 2484 | 100 | Plus |
CG17683-PC | 473 | CG17683-PC | 1..473 | 1..477 | 2447 | 99.2 | Plus |
CG17683-PD | 430 | CG17683-PD | 5..430 | 52..477 | 2223 | 99.8 | Plus |
CG17683-PE | 296 | CG17683-PE | 1..296 | 182..477 | 1567 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11683-PA | 476 | GI11683-PA | 1..476 | 1..477 | 1952 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21135-PA | 477 | GL21135-PA | 1..477 | 1..477 | 1979 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA29080-PA | 477 | GA29080-PA | 1..477 | 1..477 | 1979 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20417-PA | 478 | GM20417-PA | 1..478 | 1..477 | 2429 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17698-PA | 288 | GD17698-PA | 1..268 | 1..268 | 1396 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13047-PA | 476 | GJ13047-PA | 1..476 | 1..477 | 1942 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14772-PA | 477 | GK14772-PA | 1..477 | 1..477 | 1969 | 75.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22682-PA | 477 | GE22682-PA | 1..477 | 1..477 | 2326 | 89.1 | Plus |