BDGP Sequence Production Resources |
Search the DGRC for RE37385
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 373 |
Well: | 85 |
Vector: | pFlc-1 |
Associated Gene/Transcript | slbo-RA |
Protein status: | RE37385.pep: gold |
Preliminary Size: | 1967 |
Sequenced Size: | 2801 |
Gene | Date | Evidence |
---|---|---|
CG4354 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4354 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4354 | 2003-08-04 | Blastp of sequenced clone |
slbo | 2008-04-29 | Release 5.5 accounting |
slbo | 2008-08-15 | Release 5.9 accounting |
slbo | 2008-12-18 | 5.12 accounting |
2801 bp (2801 high quality bases) assembled on 2003-08-04
GenBank Submission: BT009992
> RE37385.complete ACTGTTACAATTTACCACTCGTCGGCGACGGACGCGCGCTCTCCGCTGGC CAAGAAAATCCAAATCGAAGAAAAGCTCGCTCAGCTAACGGTTCTTCAGG AGCGTTTCTAACACCAGCACACGTACGTGTACGAGTACGAGAGTACTAGC CAACGGCAGTCGTCAGGCCGTCTCGTATAAAATCTGTTGCATCACTGCCG CGGCACTTCAGTCGTTCGAACGCGTGCGGCCGGAGAAGTGCAGTGTCGAG TTAACAAAGTAAACAAACTGAATAAAACATTTTGCGCTAAGAATCGGAAA CATAATAAGCAATAGTACGATGCTCGGCTGCAGTGACCACCCAGGCAGCC TAAGATGAAGCATACGGAATAGCGAGCTATCCGAGTCGAACATTTCCAAA GACCCACTTCTTACCTCAGTGCAATGCTTTAGGCGCCAAACGAGCAAAAG TTTATTCCCAAATCTGAACTCTAAAAACAGCCAAAATTAACGCTCTACAA GGAATCAAGATTCTACCCTCCTTCGCGCAACTGAAAATGCTGAACATGGA GTCGCCGCAGATGTACGCCGATGCCGTTCAGACATTGGCCCAGCTGGACC TCAAGAAGGAGCCTCCCCTGCAGCAGGCCACCATTGGCCAGATCACACTG ACGGCCATGTCCACGGCGCAGCAGCAGCAGCAACAACAGCAGCAGCAACA GCAGCAGCAACAGCAGCAGCAACAACAGCAGCAGCAGCAACCCCAGCAGC AGACTACCGATGCGAACAACAACACGTCGCAGGACGCGGCACTCCTGGTC AAGCAGCACGCCATGCACCAGATGCAACAGGTCGCCGCATTGGGCAGCAA CAACAACCTGCTGCAGAAGCAGATGCTGCAGCAGTACTCCACTCAGACGG ACCTGGACGAGCTGACCACCCAGGAGATCACGCTCGACCTGCAGCACCTG ATAGACGACCAGTTCAGGGACACGGAAACGCTGGGCATCTTCAGCGACAT GGTGACCAGTCCGGGCGGACTCTCGGCCACCCTGCCGCCGAGCGGAATGG TCTCGGCGGCGGCGAAGGTCCTGCAGCAGCAGACCCTGCGGAACCAGCAC GGCTACGGGGGCAGGGGAGGCGGTGGCGGAGCAGGAGGCGCCCTGGCCTA CATGCCGCAGCCCGTGCACGCCACCTACAACAATTCCAGCGACGAGAACA GCTCCGTGGGCTCCGACTCCAGCACGATCAAGGAGGAGCCCATCGACCCC GAGTACAGGCGGCACCTGCAGGAGGCGGCTAGCCAGCAGGCCGCCTTCAT GGGCAATGGAGCAGGCCTGTACAACGGCTACGGATCGGGGGCGAATGGCT TGACCGGGGGCGGAAACCCACTCAACGGAGGCAACACCACGCCCAGCAGC AACGGGAGCAACGGCAGCACGGGCAGCAGCAACGGCAGCCAGTTCACCAA CCTGACGACGGCCAACGTCCTGGCGCACCACAACCTGCCCCACCTGGCGG CCGCAGCAGGAGCACACAATCTGCTCAAGCAGCACAGCAAGCTGCACGCG CAGCAGCAGCATCAGCAGCACCAGCAACAGCAGCAGCACCGCAAGCACAG CAACAAGCATGTGGACAAGGGCACGGATGAGTACCGCAGGCGGCGGGAGC GGAACAACATAGCGGTGCGCAAGAGCCGGGAGAAGGCTAAGGTGCGCTCC CGCGAGGTGGAGGAGCGCGTGAAGAGCCTGCTCAAGGAGAAGGACGCCCT CATTCGGCAGCTTGGTGAGATGACCAACGAGCTGCAGCTACACAAGCAGA TCTACATGCAGCTAATGAACCACGCCAATCCCGAAGTGAGCCGCGTCTGC CGCAGCTTCCTCAACACCAACGAACACTCGCTGTAGCCGCTGCCAGCTAA AGCCAGTGTCCTGCGAGTTCTGTGTGTGCGTGAGTGCTTGAATGCTTGAG TGCTCGTGTGTGTGTGTGTATGAGTGTGTGAGTGCTCCAGCCGTAAGTGT GTGCGTGTGAGCGAGACTCTGCTAAATCAAAGATACAAATGCTGTGTGGG TAGCTCGTAAGGTTCATTCTCCTCCTGCTCCTCATTGTCCTCTCTGGCCG TAGACGATGGAGCGGTCGCGCCAAGTTGGTGGGCCGCTGCATCGCTTGGA GACCAAACTCTTCTGCCGATCGCTGTGGCATTCCTTGTACATTTACTCTG TCCCCATTTCTTGTTATCACTGTAAAGCATATTTTTGTACTTAATTCTAA TTCTTAACGACTGTAACATATATATTTCGCACGTTTTTATACATAATCTT ATACATTATATCTATCATAAAGTTAAGCCAAAGAAAAATGTTAAAAATAT TAATGTAAAAAAGAATAACACGCAGGAACGAAGAACGAAAATACAAACTT CAAAGCCTATTAACTATTTATACATCTAATTCAAATGTGTACAGTTCTCG ACGGTGTGCGGCTTCGCTCTATGCTTGATGCCACGCCCACTCCCACGCCC AGCCCTGCTTGACACACAACATTAGCAAATCTCTAGTTCGTAAGTCGGAG AATCAAGCATCGCTTTACCTGCACAATCCCCAGAGGAAAGCCTCCCGAAA TCAACCAACTTGTAGCGAATTCCACGGGTTCGCTTCCGAGAGCGTAGAAG ATATGAATGCTATTAATTGTAAGGCAAACGCAATGTTCTCATTTTAATTT ATATATTCGTAAATTAAATATACACAAACAAAGAAAACTGTAAAGCAAAT CTAAACAAATTAAATAAAATTTACCTTATACAAAGAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
slbo-RA | 2785 | slbo-RA | 4..2785 | 4..2785 | 13895 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20217485..20220267 | 2785..4 | 13640 | 99.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24331520..24334303 | 2787..4 | 13905 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24332719..24335502 | 2787..4 | 13905 | 99.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20217485..20218257 | 2014..2785 | 99 | == | Minus |
chr2R | 20218353..20218682 | 1589..1918 | 99 | == | Minus |
chr2R | 20218744..20219518 | 753..1527 | 93 | == | Minus |
chr2R | 20219604..20220270 | 1..667 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slbo-RA | 1..1350 | 537..1886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slbo-RA | 1..1350 | 537..1886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slbo-RA | 1..1350 | 537..1886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slbo-RA | 1..1350 | 537..1886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slbo-RA | 1..1350 | 537..1886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slbo-RA | 1..2785 | 1..2785 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slbo-RA | 1..2785 | 1..2785 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slbo-RA | 2..2786 | 1..2785 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slbo-RA | 1..2785 | 1..2785 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slbo-RA | 2..2786 | 1..2785 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24331522..24334306 | 1..2785 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24331522..24334306 | 1..2785 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24331522..24334306 | 1..2785 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20219045..20221829 | 1..2785 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24332739..24335523 | 1..2785 | 99 | Minus |
Translation from 536 to 1885
> RE37385.pep MLNMESPQMYADAVQTLAQLDLKKEPPLQQATIGQITLTAMSTAQQQQQQ QQQQQQQQQQQQQQQQQQPQQQTTDANNNTSQDAALLVKQHAMHQMQQVA ALGSNNNLLQKQMLQQYSTQTDLDELTTQEITLDLQHLIDDQFRDTETLG IFSDMVTSPGGLSATLPPSGMVSAAAKVLQQQTLRNQHGYGGRGGGGGAG GALAYMPQPVHATYNNSSDENSSVGSDSSTIKEEPIDPEYRRHLQEAASQ QAAFMGNGAGLYNGYGSGANGLTGGGNPLNGGNTTPSSNGSNGSTGSSNG SQFTNLTTANVLAHHNLPHLAAAAGAHNLLKQHSKLHAQQQHQQHQQQQQ HRKHSNKHVDKGTDEYRRRRERNNIAVRKSREKAKVRSREVEERVKSLLK EKDALIRQLGEMTNELQLHKQIYMQLMNHANPEVSRVCRSFLNTNEHSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13466-PA | 450 | GF13466-PA | 1..450 | 1..449 | 1574 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19941-PA | 450 | GG19941-PA | 1..450 | 1..449 | 2317 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20906-PA | 473 | GH20906-PA | 1..473 | 1..449 | 1281 | 72.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
slbo-PB | 449 | CG4354-PB | 1..449 | 1..449 | 2308 | 100 | Plus |
slbo-PA | 449 | CG4354-PA | 1..449 | 1..449 | 2308 | 100 | Plus |
CG43347-PD | 2652 | CG43347-PD | 1497..1890 | 23..357 | 185 | 26 | Plus |
CG43347-PB | 2666 | CG43347-PB | 1511..1904 | 23..357 | 185 | 26 | Plus |
CG43347-PC | 2684 | CG43347-PC | 1529..1922 | 23..357 | 185 | 26 | Plus |
Smr-PG | 3607 | CG4013-PG | 161..461 | 27..349 | 170 | 25.7 | Plus |
ctrip-PE | 2930 | CG42574-PE | 577..892 | 8..349 | 169 | 26.8 | Plus |
ctrip-PA | 3140 | CG17735-PB | 787..1102 | 8..349 | 169 | 26.8 | Plus |
ctrip-PB | 3140 | CG42574-PB | 787..1102 | 8..349 | 169 | 26.8 | Plus |
ctrip-PJ | 2929 | CG42574-PJ | 577..891 | 8..349 | 168 | 27.2 | Plus |
ctrip-PF | 3139 | CG42574-PF | 787..1101 | 8..349 | 168 | 27.2 | Plus |
Smr-PF | 3601 | CG4013-PF | 161..455 | 27..349 | 167 | 25.2 | Plus |
Smr-PE | 3601 | CG4013-PE | 161..455 | 27..349 | 167 | 25.2 | Plus |
Smr-PD | 3601 | CG4013-PD | 161..455 | 27..349 | 167 | 25.2 | Plus |
Smr-PF | 3601 | CG4013-PF | 55..377 | 18..376 | 166 | 22.8 | Plus |
Smr-PE | 3601 | CG4013-PE | 55..377 | 18..376 | 166 | 22.8 | Plus |
Smr-PD | 3601 | CG4013-PD | 55..377 | 18..376 | 166 | 22.8 | Plus |
Hr38-PD | 836 | CG1864-PD | 54..394 | 45..356 | 163 | 22.6 | Plus |
Hr38-PB | 1078 | CG1864-PB | 296..636 | 45..356 | 163 | 22.6 | Plus |
Ptip-PA | 2294 | CG32133-PA | 1123..1247 | 15..142 | 161 | 36.4 | Plus |
Cfp1-PB | 643 | CG17446-PB | 565..634 | 45..127 | 160 | 45.8 | Plus |
Cfp1-PA | 663 | CG17446-PA | 585..654 | 45..127 | 160 | 45.8 | Plus |
CG44085-PH | 756 | CG44085-PH | 323..496 | 5..189 | 160 | 29.9 | Plus |
CG44085-PL | 833 | CG44085-PL | 400..573 | 5..189 | 160 | 29.9 | Plus |
CG44085-PI | 833 | CG44085-PI | 400..573 | 5..189 | 160 | 29.9 | Plus |
CG44085-PC | 836 | CG44085-PC | 400..573 | 5..189 | 160 | 29.9 | Plus |
CG44085-PM | 864 | CG44085-PM | 285..458 | 5..189 | 160 | 29.9 | Plus |
CG44085-PF | 902 | CG44085-PF | 323..496 | 5..189 | 160 | 29.9 | Plus |
CG44085-PD | 918 | CG44085-PD | 323..496 | 5..189 | 160 | 29.9 | Plus |
CG44085-PG | 942 | CG44085-PG | 323..496 | 5..189 | 160 | 29.9 | Plus |
CG44085-PK | 979 | CG44085-PK | 400..573 | 5..189 | 160 | 29.9 | Plus |
CG44085-PJ | 979 | CG44085-PJ | 400..573 | 5..189 | 160 | 29.9 | Plus |
CG44085-PN | 1007 | CG44085-PN | 400..573 | 5..189 | 160 | 29.9 | Plus |
CG44085-PP | 2246 | CG44085-PP | 296..469 | 5..189 | 160 | 29.9 | Plus |
CG44085-PO | 2381 | CG44085-PO | 285..458 | 5..189 | 160 | 29.9 | Plus |
sima-PC | 869 | CG45051-PC | 104..413 | 33..366 | 158 | 21.6 | Plus |
sima-PA | 1507 | CG45051-PA | 742..1051 | 33..366 | 158 | 21.6 | Plus |
sima-PD | 1593 | CG45051-PD | 828..1137 | 33..366 | 158 | 21.6 | Plus |
ec-PA | 1712 | CG2904-PA | 1439..1641 | 41..226 | 158 | 31.3 | Plus |
ec-PB | 1746 | CG2904-PB | 1473..1675 | 41..226 | 158 | 31.3 | Plus |
ec-PC | 1765 | CG2904-PC | 1492..1694 | 41..226 | 158 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18345-PA | 454 | GI18345-PA | 1..454 | 1..449 | 1304 | 73.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20490-PA | 455 | GL20490-PA | 1..455 | 1..449 | 1673 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18129-PA | 455 | GA18129-PA | 1..455 | 1..449 | 1673 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11843-PA | 449 | GM11843-PA | 1..449 | 1..449 | 2296 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24965-PA | 403 | GD24965-PA | 1..403 | 1..449 | 1949 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\slbo-PA | 453 | GJ20741-PA | 1..453 | 1..449 | 1334 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22090-PA | 456 | GK22090-PA | 1..456 | 1..449 | 1492 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11469-PA | 456 | GE11469-PA | 1..456 | 1..449 | 2308 | 97.4 | Plus |
Translation from 536 to 1885
> RE37385.hyp MLNMESPQMYADAVQTLAQLDLKKEPPLQQATIGQITLTAMSTAQQQQQQ QQQQQQQQQQQQQQQQQQPQQQTTDANNNTSQDAALLVKQHAMHQMQQVA ALGSNNNLLQKQMLQQYSTQTDLDELTTQEITLDLQHLIDDQFRDTETLG IFSDMVTSPGGLSATLPPSGMVSAAAKVLQQQTLRNQHGYGGRGGGGGAG GALAYMPQPVHATYNNSSDENSSVGSDSSTIKEEPIDPEYRRHLQEAASQ QAAFMGNGAGLYNGYGSGANGLTGGGNPLNGGNTTPSSNGSNGSTGSSNG SQFTNLTTANVLAHHNLPHLAAAAGAHNLLKQHSKLHAQQQHQQHQQQQQ HRKHSNKHVDKGTDEYRRRRERNNIAVRKSREKAKVRSREVEERVKSLLK EKDALIRQLGEMTNELQLHKQIYMQLMNHANPEVSRVCRSFLNTNEHSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
slbo-PB | 449 | CG4354-PB | 1..449 | 1..449 | 2308 | 100 | Plus |
slbo-PA | 449 | CG4354-PA | 1..449 | 1..449 | 2308 | 100 | Plus |
CG43347-PD | 2652 | CG43347-PD | 1497..1890 | 23..357 | 185 | 26 | Plus |
CG43347-PB | 2666 | CG43347-PB | 1511..1904 | 23..357 | 185 | 26 | Plus |
CG43347-PC | 2684 | CG43347-PC | 1529..1922 | 23..357 | 185 | 26 | Plus |