BDGP Sequence Production Resources |
Search the DGRC for RE37682
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 376 |
Well: | 82 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG7785-RA |
Protein status: | RE37682.pep: gold |
Preliminary Size: | 852 |
Sequenced Size: | 1757 |
Gene | Date | Evidence |
---|---|---|
CG7785 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7785 | 2002-03-28 | Blastp of sequenced clone |
CG7785 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7785 | 2008-04-29 | Release 5.5 accounting |
CG7785 | 2008-08-15 | Release 5.9 accounting |
CG7785 | 2008-12-18 | 5.12 accounting |
1757 bp (1757 high quality bases) assembled on 2002-03-28
GenBank Submission: AY094871
> RE37682.complete GGCTGTTTACAAAAACAAAACCAAGCGAAGAAGCGAAAATTATTGGCGAT TTTTAAAAATCCAAATTAAAACTAGATTCGGAGTCGGAAAACCTTCATAG ATTTGGGAATGTTCTGCTGCCTACGCACCTGTCTCAATGGTGGACACATA AGGAAACCGACGGCAACCAGTCGCCTGCGGGAGCCCGATGTTCACCTGGA TGCAGCGCATATGGGACCTGATGTAATCCTGCTGTCACACCAACTGCGCG TAACGGGCACTGGCGGCGTCCTGGCCACGGCGCCTTTGGTCCAATCGAAG TCCTACTTCGAGGTGAAGATCCAGCACGGCGGCAGCTGGTCGGTGGGCTT GGCAACGCGTCAAACGGATCTCAGTCGCAAGAGCGGCGGCGGGGATCGAG AGTCCTGGTGCCTGTGCTCCGATAATGCCACACGCCACAATGACCGCGAG GAGTTCCGACCAGTGGTGCAGTCTGCTTGCACCACTCAGCCAGCGAGGAC GAGCAATGGTATCCTGAACAATAGCGCTGCCAAAGCGGCCGGACTCATTG CCATCGAGGATTTGCAGCAGGAAGATCTGCTGATGACCACTGGAGTGGCA TCATCCGATGTGGATATCGGTGATTCGTTGATAGCATCGCCACAGCGAGA TTTTCCCGATGAAGGAGACATTGTGGGCGTCGCCTTTGACCACGTGGAGC TGAATTTCTACTTCAATGGAAAGAATCTGGAGGTTCCATTTCGAAATGTA CGAGGAGCAGCACTATTTCCCGTCATTTATGTGGGCAATGGCGCCATTCT GGACATTATCTTGGATAATTTTTCACACGGACCACCACCAGGATTCGAAC GCATTCTATTGGAACAGTCACTTCTTTAGATAGTCCACACAAAAGCCTTG AACAAATTAGCAGCATGAGAACAAAGCATTAACAAGAATAACTAAAAGAC GGTGCATTTTAGGACTTTAGGAACGCATTTCATTCAAGTAATTTTTGTGG CACTTTCTCTGCCAATGCGGACAACTACCTTTAAAAAAAATGAAATACAT TATTGTCTAGTAACACTTTATTTATTTAATGTAAAAGTTAAGTTACAAGA ATGACATTTTAAATATGCATTCTAGATTAAGTTTTAAAATGCGAACTTTC AGTATAAAACAAATTATTTACACATTTTAGTTTTAGTTTTAGTTATTCCT TTGCCATATTTCTTCTCTAGTCAAAAAGAAAAGTTCCCAAGCTGAATTCT ATCTCACAACCAAAACAGCTATTAAATTATTTCAATTTACTTTGTACACA TATCTTAATCGATTTTGTTGATTTTCACCACATATTTACTTATAGTCGTA AAATGCACTGTTCTGTTCTCATTTAGACATCAGGTGTATAAACTTTGTAA ACTCTCTAGTCCTTGCACTATCCAAACCGAAAGTATTTGTATAATTTTAT TAATGTTTTGTAAATTATTTACGTAGCTTGACGTAGCATTTGTATTATAC ACAGAGATACGCGTATCTGCATACAGATACAGATGAATTTTTTTGTAGGA CTAGGTGGCCACAATTCAATTCTGACTTCATCGTACACATTCCAATTTAC AACGGCAACGTACTCGAGCACGGAATTACCTAACTAAATATAAGAATATA TCTGTATATCTAATAAATTGTATCTACACGTATCCAACGCTTCGAAAACT GATTAATCCGCGCGCGGACAATAAATCAATGTTATGTACTTAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7785-RA | 1757 | CG7785-RA | 16..1757 | 2..1743 | 8710 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 13847135..13848095 | 781..1741 | 4805 | 100 | Plus |
chr3R | 27901430 | chr3R | 13846511..13847078 | 214..781 | 2825 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 13846013..13846226 | 2..215 | 1070 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 18022729..18023691 | 781..1743 | 4815 | 100 | Plus |
3R | 32079331 | 3R | 18022105..18022672 | 214..781 | 2840 | 100 | Plus |
3R | 32079331 | 3R | 18021607..18021820 | 2..215 | 1070 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 17763560..17764522 | 781..1743 | 4815 | 100 | Plus |
3R | 31820162 | 3R | 17762936..17763503 | 214..781 | 2840 | 100 | Plus |
3R | 31820162 | 3R | 17762438..17762651 | 2..215 | 1070 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
412 | 7567 | 412 412 7567bp | 1578..1820 | 1503..1273 | 139 | 56.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 13846012..13846225 | 1..214 | 99 | -> | Plus |
chr3R | 13846512..13847078 | 215..781 | 99 | -> | Plus |
chr3R | 13847136..13848095 | 782..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7785-RA | 1..771 | 109..879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7785-RA | 1..771 | 109..879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7785-RA | 1..771 | 109..879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7785-RA | 1..771 | 109..879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7785-RA | 1..771 | 109..879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7785-RA | 2..1742 | 1..1741 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7785-RA | 2..1742 | 1..1741 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7785-RA | 7..1747 | 1..1741 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7785-RA | 2..1742 | 1..1741 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7785-RA | 7..1747 | 1..1741 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18021606..18021819 | 1..214 | 99 | -> | Plus |
3R | 18022106..18022672 | 215..781 | 100 | -> | Plus |
3R | 18022730..18023689 | 782..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18021606..18021819 | 1..214 | 99 | -> | Plus |
3R | 18022106..18022672 | 215..781 | 100 | -> | Plus |
3R | 18022730..18023689 | 782..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18021606..18021819 | 1..214 | 99 | -> | Plus |
3R | 18022106..18022672 | 215..781 | 100 | -> | Plus |
3R | 18022730..18023689 | 782..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 13847328..13847541 | 1..214 | 99 | -> | Plus |
arm_3R | 13847828..13848394 | 215..781 | 100 | -> | Plus |
arm_3R | 13848452..13849411 | 782..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17762437..17762650 | 1..214 | 99 | -> | Plus |
3R | 17762937..17763503 | 215..781 | 100 | -> | Plus |
3R | 17763561..17764520 | 782..1741 | 100 | Plus |
Translation from 108 to 878
> RE37682.pep MFCCLRTCLNGGHIRKPTATSRLREPDVHLDAAHMGPDVILLSHQLRVTG TGGVLATAPLVQSKSYFEVKIQHGGSWSVGLATRQTDLSRKSGGGDRESW CLCSDNATRHNDREEFRPVVQSACTTQPARTSNGILNNSAAKAAGLIAIE DLQQEDLLMTTGVASSDVDIGDSLIASPQRDFPDEGDIVGVAFDHVELNF YFNGKNLEVPFRNVRGAALFPVIYVGNGAILDIILDNFSHGPPPGFERIL LEQSLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16751-PA | 256 | GF16751-PA | 1..256 | 1..256 | 1220 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22604-PA | 256 | GG22604-PA | 1..256 | 1..256 | 1333 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15045-PA | 266 | GH15045-PA | 1..266 | 1..256 | 1099 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7785-PA | 256 | CG7785-PA | 1..256 | 1..256 | 1339 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23710-PA | 263 | GI23710-PA | 1..263 | 1..256 | 1087 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12585-PA | 259 | GL12585-PA | 1..259 | 1..256 | 1186 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20585-PA | 259 | GA20585-PA | 1..259 | 1..256 | 1182 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15272-PA | 245 | GM15272-PA | 1..245 | 1..256 | 1248 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19195-PA | 256 | GD19195-PA | 1..256 | 1..256 | 1345 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23269-PA | 265 | GJ23269-PA | 1..265 | 1..256 | 1073 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11237-PA | 257 | GK11237-PA | 1..257 | 1..256 | 1060 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25506-PA | 256 | GE25506-PA | 1..256 | 1..256 | 1321 | 96.5 | Plus |
Translation from 108 to 878
> RE37682.hyp MFCCLRTCLNGGHIRKPTATSRLREPDVHLDAAHMGPDVILLSHQLRVTG TGGVLATAPLVQSKSYFEVKIQHGGSWSVGLATRQTDLSRKSGGGDRESW CLCSDNATRHNDREEFRPVVQSACTTQPARTSNGILNNSAAKAAGLIAIE DLQQEDLLMTTGVASSDVDIGDSLIASPQRDFPDEGDIVGVAFDHVELNF YFNGKNLEVPFRNVRGAALFPVIYVGNGAILDIILDNFSHGPPPGFERIL LEQSLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7785-PA | 256 | CG7785-PA | 1..256 | 1..256 | 1339 | 100 | Plus |