BDGP Sequence Production Resources |
Search the DGRC for RE38102
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 381 |
Well: | 2 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG12974-RB |
Protein status: | RE38102.pep: gold |
Sequenced Size: | 1456 |
Gene | Date | Evidence |
---|---|---|
CG12974 | 2008-04-29 | Release 5.5 accounting |
CG12974 | 2008-04-29 | Picked prior to 5.5 |
CG12974 | 2008-08-15 | Release 5.9 accounting |
CG12974 | 2008-12-18 | 5.12 accounting |
1456 bp assembled on 2007-11-15
GenBank Submission: BT031290
> RE38102.complete AGTTGGCCAACAGACGTCGCGTACTGCAAAAGCGCACTCAACCCGATCGA TTTGAGTCCCGCATACGGGGCGTGAGAATATCTCCCAGTATCTGGAAACC ACCCCTATATATCGAACAGTCACTGCAAAATGTATTCAGCACCAGCGGCA AAAATCAAGCACTTTGGCTCCCTTAAAACGGTAGCAGCTTGGGCCGGAAT TCTCGGAGTGGCCCAGTCCATCATCTGGATGGGCTTGACCATAACAGCGA TATGTGCCTACAATTGTGTCCTGTATATTACAAATGACCTCACCTATGGC TCCATGGTCAAGACTGTATTCTTTGACGTGTACTTCAAGGGCAGTTGCAA GATGAATCCCAGTGATTACCAGAACTACGACCAAACCATCCTGAATACAG TGACTACTGTTTTTGATCCCACCCAGATTTTGATCTGGAATTCGGTCTAC CTGGGCGTTTCGGTTTGCTGGCTAATCGTCTCCGTTGTGCTGCTACTGTG GGTGCGCAAGGACAACCCGAAGCAGACCGTGACTGCCATCTACATCTGGG CCTTCTTCGTGGCCACCATATGCTGCATGGATGTAGCTTCTGGAGTGATC TTCGGCGTGGACTACGGACGTTTCCACAAGGAGGCTCTGAGGTATAATGC CAATAGTATCAATGCTGGTGTCATCTATCCCTTGGCTGCCACCTTGATCG CCGGAGGAGTGGCTGCCATTTCCATGATGGTCATCTCCTTCAAGGGATTC GTTCTGTGGTTCATTAACTTTGGACTGCTCGCATACCTTGTCGCGAGAGC CATTCGAATTTCCACCGATAAGGACAATGTGGATACTTTGTTCAATCCTC GCAAGGATTCCAATGATATTCTGACCACCAGGACCCCGATTCGCGCCTAC GAGGAGGTGGAGGTCCAGGCGTATAACAATGCCGCCTACGTTCCGGAAAC CCGTTCCATGGCCGAGACCATCCAGGTGAACGAGGGAGCCATCGTGCGGG CGGCGCACTTGTCGATGGACTCGAACCTAATGGATCGTCGCTTCAGGGAC CTCAACGCGTACCAGCAGTACCCGCCTCCGAATCCGCAGCAAAGTCGCCC GCTGAAGCAATCTTCGCAGAATCCCATGGAGACCATTGTGGTGGCCACCT CGGGATTCCCCGTGCCGGACTACTCCCCGCAGCCCAGTCCCAATGGCGTT CTGCGCCACAACCAGTACTAGATTACTAAGCCCCTTGGCGCCCCCAAAAA AGCCCTCTTCGATACTATAATTCTCAAATAATCCCAGCTAAAGTTTAGTT CAAATTTTATCAGGGGGGGCAACTTCTTCTGCGTTTTTATTCTTATTTAT TTGCATGTTTATAACGATATAAGTGTACAGCTGTAAATATATAAAGCCGT TCTAGTTCCGCAGTGGAATGGTATTTGTTTATATAAAAAGAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 21270997..21271526 | 1435..906 | 2650 | 100 | Minus |
chr3L | 24539361 | chr3L | 21272153..21272485 | 832..500 | 1665 | 100 | Minus |
chr3L | 24539361 | chr3L | 21273189..21273479 | 500..210 | 1455 | 100 | Minus |
chr3L | 24539361 | chr3L | 21274062..21274272 | 211..1 | 1055 | 100 | Minus |
chr3L | 24539361 | chr3L | 21271588..21271663 | 906..831 | 380 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 21281989..21282518 | 1435..906 | 2650 | 100 | Minus |
3L | 28110227 | 3L | 21283145..21283477 | 832..500 | 1665 | 100 | Minus |
3L | 28110227 | 3L | 21284181..21284471 | 500..210 | 1455 | 100 | Minus |
3L | 28110227 | 3L | 21285054..21285264 | 211..1 | 1055 | 100 | Minus |
3L | 28110227 | 3L | 21282580..21282655 | 906..831 | 380 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 21275089..21275618 | 1435..906 | 2650 | 100 | Minus |
3L | 28103327 | 3L | 21276245..21276577 | 832..500 | 1665 | 100 | Minus |
3L | 28103327 | 3L | 21277281..21277571 | 500..210 | 1455 | 100 | Minus |
3L | 28103327 | 3L | 21278154..21278364 | 211..1 | 1055 | 100 | Minus |
3L | 28103327 | 3L | 21275680..21275755 | 906..831 | 380 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 21270995..21271526 | 906..1440 | 99 | <- | Minus |
chr3L | 21271589..21271662 | 832..905 | 100 | <- | Minus |
chr3L | 21272154..21272485 | 500..831 | 100 | <- | Minus |
chr3L | 21273190..21273478 | 211..499 | 100 | <- | Minus |
chr3L | 21274063..21274272 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12974-RB | 1..1092 | 130..1221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12974-RB | 1..1092 | 130..1221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12974-RB | 1..1092 | 130..1221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12974-RB | 1..1092 | 130..1221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12974-RB | 1..1092 | 130..1221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12974-RB | 1..1410 | 1..1410 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12974-RB | 1..1410 | 1..1410 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12974-RB | 173..1606 | 1..1434 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12974-RB | 1..1410 | 1..1410 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12974-RD | 173..1609 | 1..1440 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21284182..21284470 | 211..499 | 100 | <- | Minus |
3L | 21285055..21285264 | 1..210 | 100 | Minus | |
3L | 21281987..21282518 | 906..1440 | 99 | <- | Minus |
3L | 21282581..21282654 | 832..905 | 100 | <- | Minus |
3L | 21283146..21283477 | 500..831 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21284182..21284470 | 211..499 | 100 | <- | Minus |
3L | 21285055..21285264 | 1..210 | 100 | Minus | |
3L | 21281987..21282518 | 906..1440 | 99 | <- | Minus |
3L | 21282581..21282654 | 832..905 | 100 | <- | Minus |
3L | 21283146..21283477 | 500..831 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21284182..21284470 | 211..499 | 100 | <- | Minus |
3L | 21285055..21285264 | 1..210 | 100 | Minus | |
3L | 21281987..21282518 | 906..1440 | 99 | <- | Minus |
3L | 21282581..21282654 | 832..905 | 100 | <- | Minus |
3L | 21283146..21283477 | 500..831 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 21275087..21275618 | 906..1440 | 99 | <- | Minus |
arm_3L | 21275681..21275754 | 832..905 | 100 | <- | Minus |
arm_3L | 21276246..21276577 | 500..831 | 100 | <- | Minus |
arm_3L | 21277282..21277570 | 211..499 | 100 | <- | Minus |
arm_3L | 21278155..21278364 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21278155..21278364 | 1..210 | 100 | Minus | |
3L | 21275087..21275618 | 906..1440 | 99 | <- | Minus |
3L | 21275681..21275754 | 832..905 | 100 | <- | Minus |
3L | 21276246..21276577 | 500..831 | 100 | <- | Minus |
3L | 21277282..21277570 | 211..499 | 100 | <- | Minus |
Translation from 129 to 1220
> RE38102.pep MYSAPAAKIKHFGSLKTVAAWAGILGVAQSIIWMGLTITAICAYNCVLYI TNDLTYGSMVKTVFFDVYFKGSCKMNPSDYQNYDQTILNTVTTVFDPTQI LIWNSVYLGVSVCWLIVSVVLLLWVRKDNPKQTVTAIYIWAFFVATICCM DVASGVIFGVDYGRFHKEALRYNANSINAGVIYPLAATLIAGGVAAISMM VISFKGFVLWFINFGLLAYLVARAIRISTDKDNVDTLFNPRKDSNDILTT RTPIRAYEEVEVQAYNNAAYVPETRSMAETIQVNEGAIVRAAHLSMDSNL MDRRFRDLNAYQQYPPPNPQQSRPLKQSSQNPMETIVVATSGFPVPDYSP QPSPNGVLRHNQY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10173-PA | 366 | GF10173-PA | 1..366 | 1..363 | 1553 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13247-PA | 363 | GG13247-PA | 1..363 | 1..363 | 1726 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16516-PA | 366 | GH16516-PA | 3..366 | 4..363 | 1260 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12974-PD | 363 | CG12974-PD | 1..363 | 1..363 | 1898 | 100 | Plus |
CG12974-PB | 363 | CG12974-PB | 1..363 | 1..363 | 1898 | 100 | Plus |
CG12974-PC | 330 | CG12974-PC | 1..330 | 34..363 | 1728 | 100 | Plus |
CG12974-PA | 330 | CG12974-PA | 1..330 | 34..363 | 1728 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12197-PA | 367 | GI12197-PA | 1..367 | 1..363 | 1301 | 65.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24592-PA | 363 | GL24592-PA | 5..363 | 8..363 | 1453 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11948-PA | 363 | GA11948-PA | 5..363 | 8..363 | 1453 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22152-PA | 363 | GM22152-PA | 1..363 | 1..363 | 1887 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12128-PA | 363 | GD12128-PA | 1..363 | 1..363 | 1888 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11429-PA | 365 | GJ11429-PA | 10..364 | 9..361 | 1317 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16676-PA | 370 | GK16676-PA | 1..369 | 1..363 | 1288 | 65.9 | Plus |
Translation from 129 to 1220
> RE38102.hyp MYSAPAAKIKHFGSLKTVAAWAGILGVAQSIIWMGLTITAICAYNCVLYI TNDLTYGSMVKTVFFDVYFKGSCKMNPSDYQNYDQTILNTVTTVFDPTQI LIWNSVYLGVSVCWLIVSVVLLLWVRKDNPKQTVTAIYIWAFFVATICCM DVASGVIFGVDYGRFHKEALRYNANSINAGVIYPLAATLIAGGVAAISMM VISFKGFVLWFINFGLLAYLVARAIRISTDKDNVDTLFNPRKDSNDILTT RTPIRAYEEVEVQAYNNAAYVPETRSMAETIQVNEGAIVRAAHLSMDSNL MDRRFRDLNAYQQYPPPNPQQSRPLKQSSQNPMETIVVATSGFPVPDYSP QPSPNGVLRHNQY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12974-PD | 363 | CG12974-PD | 1..363 | 1..363 | 1898 | 100 | Plus |
CG12974-PB | 363 | CG12974-PB | 1..363 | 1..363 | 1898 | 100 | Plus |
CG12974-PC | 330 | CG12974-PC | 1..330 | 34..363 | 1728 | 100 | Plus |
CG12974-PA | 330 | CG12974-PA | 1..330 | 34..363 | 1728 | 100 | Plus |