Clone RE38281 Report

Search the DGRC for RE38281

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:382
Well:81
Vector:pFlc-1
Associated Gene/Transcriptsca-RA
Protein status:RE38281.pep: gold
Preliminary Size:2695
Sequenced Size:3809

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17579 2002-01-01 Sim4 clustering to Release 2
CG17579 2002-06-30 Blastp of sequenced clone
sca 2008-04-29 Release 5.5 accounting
sca 2008-08-15 Release 5.9 accounting
sca 2008-12-18 5.12 accounting

Clone Sequence Records

RE38281.complete Sequence

3809 bp (3809 high quality bases) assembled on 2002-06-30

GenBank Submission: AY129456

> RE38281.complete
AGTGCTTCGAAGAACGCCGCGCTGAAAACATCCTTCCATTGGAAGGTGCT
CTAGTGAAATCGGTGATATACTTCATCCAGTGCTGCGAGCGAACTTTCCG
TGGACCAAAAGTGAAAAGAACAGCTAAGCCAAGCAACAAGGATTAAGCCC
GAGGAAACGCCTGGAATAATTGTAGCATTGTTTGCCAGCGCCTTTTTATA
AGGTGTTTGACTGTCACGGCGCCGGAAAGTCAAGGAGAATTGTTTGTGTG
TCGGCATGCGTGCCAGTTATTTGCATAAATTGCCCATCTAACTCGAGTTC
CCTTTTTTGTGCGGTGTGAATGAGAGATTGGCAAACATTCCCGGACCTCC
AAAAAAAGAAAGTTTCGCGTGACCATTTAAATTGCCCTGCAACAATGGCA
GGTTCAAACGTTTTGTGGCCAATACTCCTGGCCGTGGTGCTGCTCCAAAT
ATCCGTGGCATTCGTGAGTGGAGCGGCCAGTGGTGGGGTAGTCCTTAGCG
ACGTGAACAACATGTTGCGCGATGCCAAGGTGGTGACCTCGGAGAAACCC
GTTGTGCACTCAAAACAGGAAACGGAAGCGCCGGAATCCAGCGTGGAGCT
GCTCCGCTTCGTCGATGATGACGAGGATAGCGAGGACATCAGCTCCATTG
AACGGCAGGATGGCAGGACAATGGAGAGCAAAAAAATGGCCGATCAGGTG
CGCCTGTTGACCAAGCAGCTCAACGCCCTGATGCTGCGGCGCCGCGAGGA
TTACGAGATGCTGGAGCACAATCTGCGCAAATCCCTGCGGCTCACCACGA
ATGCGAACAGCGTGGACGCCGACATGCGCAGCGAACTGAACCAACTCAGG
GAGGAGCTGGCCGCGCTGCGCTCCTCGCAGAGTGGCAACAAGGAGCGCTT
GACCGTCGAGTGGCTGCAGCAGACGATCTCCGAGATCCGCAAACAGCTGG
TGGATCTGCAAAGGACGGCCAGCAACGTGGCCCAGGATGTCCAGCAGCGC
AGCTCCACCTTTGAGGATCTGGCCACCATTCGCAGTGACTATCAGCAGCT
TAAGCTAGATCTGGCCGCTCAGCGCGAGCGCCAGCAGCAGACGGAGGTCT
ACGTCCAGGAACTGCGCGAGGAGATGCTCCAGCAGGAGCAGGACTTCCAG
CATGCCCTCGTCAAGCTGCAGCAGAGGACTCGCAAGGACGGCTCATCCGC
CAGTGTGGAGGAGGAGAGCGGTAGCCAGGAAGCCAACCAGGAGCAAACCG
GACTTGAAACCACTGCTGATCACAAGCGACGCCATTGCCGTTTTCAGAGC
GAACAGATCCACCAGCTGCAACTGGCCCAGAGGAACCTGCGCCGACAGGT
GAACGGATTGCGCTTCCACCACATCGACGAGCGGGTTCGCAGCATCGAGG
TGGAGCAGCACAGGATTGCCAATGCCAACTTTAATTTGAGCAGCCAGATC
GCTTCGCTGGACAAGCTGCATACCTCGATGCTGGAGCTGCTGGAAGATGT
GGAGGGCCTCCAGACCAAGATGGACAAGAGCATACCGGAGCTGCGGCACG
AGATCTCCAAGCTGGAGTTCGCCAATGCTCAGATCACCTCGGAGCAGAGT
CTGATCAGGGAGGAGGGCACTAATGCGGCACGATCCCTGCAAGCCATGGC
TGTAAGCGTCAGTGTCCTGCAGGAGGAGCGCGAAGGTATGCGGAAGCTGT
CCGCCAATGTGGATCAGCTGAGAACCAATGTGGATCGATTGCAGTCGCTG
GTCAATGATGAAATGAAGAATAAGCTCACCCACCTGAACAAGCCGCACAA
GCGACCACATCATCAGAATGTCCAGGCGCAGATGCCGCAGGATGATTCGC
CCATTGACTCCGTCCTGGCCGAAACTCTGGTCAGCGAGCTTGAGAACGTG
GAGACCCAGTACGAGGCCATTATCAACAAACTGCCGCACGACTGCAGCGA
GGTGCACACTCAAACAGACGGACTGCATCTGATTGCGCCCGCCGGCCAAC
GGCATCCGCTGATGACGCACTGCACCGCCGATGGATGGACGACGGTGCAA
AGGCGGTTCGATGGCAGTGCAGACTTCAACCGCTCGTGGGCGGATTATGC
CCAAGGATTTGGGGCGCCAGGCGGTGAATTCTGGATTGGCAACGAGCAGC
TGCATCACCTGACCCTGGACAACTGCAGTCGGCTGCAGGTGCAAATGCAG
GACATCTACGACAACGTTTGGGTGGCCGAGTACAAGCGATTCTACATATC
CTCGCGAGCCGATGGCTATCGGCTGCACATTGCCGAGTACTCCGGCAACG
CTTCGGATGCACTGAACTACCAACAGGGTATGCAGTTCTCGGCCATCGAT
GACGATCGGGACATCTCGCAGACGCACTGTGCTGCTAACTATGAGGGTGG
CTGGTGGTTCTCTCATTGCCAGCACGCCAATCTCAATGGGCGATACAATC
TGGGCCTGACTTGGTTCGATGCCGCTCGCAATGAATGGATAGCGGTCAAG
TCAAGCCGAATGCTGGTCAAGCGCCTGCCCGCCGTCGAGTGCCAGGCGAA
TGCCAGTGCCAGTGGCGCTTTTGTTTCCGTTTCCGGTTCGGCTGCTGATG
CTGCGCCGTCGAGCGGTGCAACAACAACAACAACAACAGCAACAGCAGCG
CCGGCGACGGTAACGACGCCGAAAACCAACAACAGTGTGGTCCAGTTCGT
GGCCGCCGGGCAGGCGTAAGTGAGCTGATCCCGCCGTTAAAGCGAGGGAA
TGAAAACCGCTACAGTGAACCACCAGAGCCATGCCTACTATAGTTGGGAG
TCCACTGTTTGTCTGTGGGAGGTGGATCTAAAAGATCGGTAGATAAGTGT
AAAAAATAAACAGAAAATCGAATATCGAAGGGCCCCCCCCCCTCCACTAT
CCCATTGTAAATATTCAGCACATAAGTTGTAGCATTAATCTTTCAAATGG
AGCTTACTCTGGCCTTAGAGTACACTAGGCGTATGCGTAATTTAGTTGGC
AGCTGCCAGCCTCGTTTCAACCGTATAAATATTCAATTCTTTGGTCTTTC
AACAAGATCTCATAGAGGCTTAAGTTCCGCGGTAGCATAAACTGAAGCGG
GAGCAAAAGAGACAGAGAGGTGGTTAGAGAGAGAGAGAGCATATCATTTA
AGAGAATGCAGAGTTAATGTCTAGATATAATCGTCCTGCCCCCAAAACTA
AAACAAAAACTTAACTAGTTGTAACATGTAAGAGGCCTAATCTCGATTAG
GCTCATCTCAGACAAATAATAAATATACAAACGGACTCGCGGAGAAGAGA
ACTTTCTAGCCTAAGTCACCATATCAGTCATATGAAGTATACATTTATTA
GTTTAGCGTTGGTAAATGTACTTGTAATTGTTGTACAATATAATAGGGTA
TACGCATCCGTTTTCCCGCTTACTAAATATCTGCTTCAGTCCAAAACCAA
ACCGATTTCCCTAAACCAACCCATGGAGTCGCATGCCAAAGAGATCAAGT
CAGAAATAGAAACAGATCATATGCAAGTTTTTACGAACACAAGAAACTGA
AAACTATTTTCTGCAGTTTTGCATATACCAAAAATAAATAAACGAACAAA
TGAAGTGAGCGAAGGGCAAAAACCATGAGAGCTAAGAAAAATGCATTTAG
CCAGTAAGTTATGAACTATATATATTATGTATACATTAATTTTATGTCCA
GTAACTTTAAGCTAACTAAAAAAAAAAAAGGAAAACCAGAAAGCTTGGCC
CTTAGACCGGCGTATTTTACAATAAATGGATTGATGTGAAAAGAAAAAAA
AAAAAAAAA

RE38281.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:44:11
Subject Length Description Subject Range Query Range Score Percent Strand
sca-RA 3886 sca-RA 54..3851 1..3798 18975 99.9 Plus
sca-RB 3886 sca-RB 54..3851 1..3798 18975 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:59:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 8687213..8689239 1773..3793 9965 99.6 Plus
chr2R 21145070 chr2R 8667756..8668607 1..850 4135 99.3 Plus
chr2R 21145070 chr2R 8686481..8687013 1242..1774 2620 99.4 Plus
chr2R 21145070 chr2R 8671559..8671956 846..1243 1990 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:53:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:59:57
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12799990..12802015 1773..3798 10130 100 Plus
2R 25286936 2R 12780544..12781393 1..850 4235 99.9 Plus
2R 25286936 2R 12799258..12799790 1242..1774 2665 100 Plus
2R 25286936 2R 12784345..12784742 846..1243 1990 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:17:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 12801189..12803214 1773..3798 10130 100 Plus
2R 25260384 2R 12781743..12782592 1..850 4235 99.8 Plus
2R 25260384 2R 12800457..12800989 1242..1774 2665 100 Plus
2R 25260384 2R 12785544..12785941 846..1243 1990 100 Plus
Blast to na_te.dros performed on 2019-03-16 22:59:58 has no hits.

RE38281.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:01:00 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 8667756..8668606 1..849 99 -> Plus
chr2R 8671563..8671956 850..1243 100 -> Plus
chr2R 8686483..8687013 1244..1774 99 -> Plus
chr2R 8687215..8689239 1775..3793 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:31:09 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
sca-RB 1..2400 320..2719 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:17:55 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
sca-RB 1..2400 320..2719 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:18:02 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
sca-RA 1..2400 320..2719 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:09:04 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
sca-RB 1..2400 320..2719 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:45:27 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
sca-RA 1..2400 320..2719 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:31:08 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
sca-RB 1..3793 1..3793 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:17:54 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
sca-RB 1..3793 1..3793 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:18:02 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
sca-RB 4..3796 1..3793 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:09:04 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
sca-RB 1..3793 1..3793 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:45:27 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
sca-RB 4..3796 1..3793 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:01:00 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12780544..12781392 1..849 99 -> Plus
2R 12784349..12784742 850..1243 100 -> Plus
2R 12799260..12799790 1244..1774 100 -> Plus
2R 12799992..12802010 1775..3793 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:01:00 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12780544..12781392 1..849 99 -> Plus
2R 12784349..12784742 850..1243 100 -> Plus
2R 12799260..12799790 1244..1774 100 -> Plus
2R 12799992..12802010 1775..3793 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:01:00 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12780544..12781392 1..849 99 -> Plus
2R 12784349..12784742 850..1243 100 -> Plus
2R 12799260..12799790 1244..1774 100 -> Plus
2R 12799992..12802010 1775..3793 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:18:02 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8668049..8668897 1..849 99 -> Plus
arm_2R 8671854..8672247 850..1243 100 -> Plus
arm_2R 8686765..8687295 1244..1774 100 -> Plus
arm_2R 8687497..8689515 1775..3793 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:41:07 Download gff for RE38281.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12781743..12782591 1..849 99 -> Plus
2R 12785548..12785941 850..1243 100 -> Plus
2R 12800459..12800989 1244..1774 100 -> Plus
2R 12801191..12803209 1775..3793 100   Plus

RE38281.pep Sequence

Translation from 319 to 2718

> RE38281.pep
MRDWQTFPDLQKKKVSRDHLNCPATMAGSNVLWPILLAVVLLQISVAFVS
GAASGGVVLSDVNNMLRDAKVVTSEKPVVHSKQETEAPESSVELLRFVDD
DEDSEDISSIERQDGRTMESKKMADQVRLLTKQLNALMLRRREDYEMLEH
NLRKSLRLTTNANSVDADMRSELNQLREELAALRSSQSGNKERLTVEWLQ
QTISEIRKQLVDLQRTASNVAQDVQQRSSTFEDLATIRSDYQQLKLDLAA
QRERQQQTEVYVQELREEMLQQEQDFQHALVKLQQRTRKDGSSASVEEES
GSQEANQEQTGLETTADHKRRHCRFQSEQIHQLQLAQRNLRRQVNGLRFH
HIDERVRSIEVEQHRIANANFNLSSQIASLDKLHTSMLELLEDVEGLQTK
MDKSIPELRHEISKLEFANAQITSEQSLIREEGTNAARSLQAMAVSVSVL
QEEREGMRKLSANVDQLRTNVDRLQSLVNDEMKNKLTHLNKPHKRPHHQN
VQAQMPQDDSPIDSVLAETLVSELENVETQYEAIINKLPHDCSEVHTQTD
GLHLIAPAGQRHPLMTHCTADGWTTVQRRFDGSADFNRSWADYAQGFGAP
GGEFWIGNEQLHHLTLDNCSRLQVQMQDIYDNVWVAEYKRFYISSRADGY
RLHIAEYSGNASDALNYQQGMQFSAIDDDRDISQTHCAANYEGGWWFSHC
QHANLNGRYNLGLTWFDAARNEWIAVKSSRMLVKRLPAVECQANASASGA
FVSVSGSAADAAPSSGATTTTTTATAAPATVTTPKTNNSVVQFVAAGQA*

RE38281.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 04:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12920-PA 810 GF12920-PA 14..746 12..744 3192 82.9 Plus
Dana\GF13288-PA 288 GF13288-PA 30..271 517..734 345 33.9 Plus
Dana\GF21732-PA 302 GF21732-PA 95..266 539..712 343 38.1 Plus
Dana\GF22929-PA 423 GF22929-PA 217..422 539..737 336 33.3 Plus
Dana\GF22918-PA 451 GF22918-PA 245..450 539..737 334 33.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 04:45:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20337-PA 806 GG20337-PA 1..806 1..799 3853 93.4 Plus
Dere\GG22162-PA 291 GG22162-PA 34..278 516..744 341 33.2 Plus
Dere\GG10629-PA 417 GG10629-PA 202..372 548..712 340 39.5 Plus
Dere\GG24228-PA 227 GG24228-PA 20..193 543..709 327 37.9 Plus
Dere\GG18333-PA 332 GG18333-PA 95..292 520..709 303 36.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21763-PA 773 GH21763-PA 21..773 51..799 2761 69.5 Plus
Dgri\GH20551-PA 273 GH20551-PA 52..228 535..709 369 40.6 Plus
Dgri\GH20745-PA 242 GH20745-PA 31..241 539..736 355 36.2 Plus
Dgri\GH23089-PA 257 GH23089-PA 64..253 554..734 335 38.5 Plus
Dgri\GH23081-PA 301 GH23081-PA 58..294 510..744 331 34 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:16
Subject Length Description Subject Range Query Range Score Percent Strand
sca-PB 799 CG17579-PB 1..799 1..799 4080 100 Plus
sca-PA 799 CG17579-PA 1..799 1..799 4080 100 Plus
CG30281-PA 291 CG30281-PA 32..283 517..749 339 33.5 Plus
CG8642-PB 429 CG8642-PB 53..384 352..712 334 27.8 Plus
CG41520-PD 627 CG41520-PD 434..617 569..737 318 38.4 Plus
CG41520-PA 745 CG41520-PA 552..735 569..737 318 38.4 Plus
CG31832-PB 227 CG31832-PB 22..193 539..709 315 37.4 Plus
CG6788-PA 358 CG6788-PA 59..342 479..723 294 28.9 Plus
CG30280-PD 288 CG30280-PD 30..245 500..712 282 32.4 Plus
CG9500-PB 292 CG9500-PB 19..291 475..744 280 24.6 Plus
CG1889-PC 332 CG1889-PC 41..327 461..734 278 30 Plus
CG1889-PA 332 CG1889-PA 41..327 461..734 278 30 Plus
CG1889-PD 338 CG1889-PD 131..333 548..734 277 34.5 Plus
CG1791-PA 334 CG1791-PA 51..294 447..709 275 28.3 Plus
CG41520-PB 729 CG41520-PB 560..719 590..737 271 37.3 Plus
CG9593-PB 382 CG9593-PB 154..369 541..734 268 32.7 Plus
CG1791-PC 333 CG1791-PC 120..293 539..709 266 33.9 Plus
CG1791-PB 195 CG1791-PB 16..155 572..709 265 37.9 Plus
CG10359-PG 459 CG10359-PG 241..418 537..709 257 32.4 Plus
CG10359-PE 485 CG10359-PE 267..444 537..709 257 32.4 Plus
CG5550-PA 246 CG5550-PA 25..209 525..709 254 31.4 Plus
CG5550-PB 250 CG5550-PB 25..213 525..709 239 30.7 Plus
CG7668-PC 422 CG7668-PC 14..422 289..737 196 21.7 Plus
CG7668-PA 422 CG7668-PA 14..422 289..737 196 21.7 Plus
Gmap-PC 1208 CG33206-PC 499..867 82..453 169 22 Plus
Gmap-PB 1208 CG33206-PB 499..867 82..453 169 22 Plus
Gmap-PA 1398 CG33206-PA 689..1057 82..453 169 22 Plus
Golgin245-PA 1489 CG3493-PA 568..1056 79..548 162 19.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 04:45:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19309-PA 751 GI19309-PA 1..751 65..799 2636 69.5 Plus
Dmoj\GI21406-PA 397 GI21406-PA 63..364 394..717 366 30 Plus
Dmoj\GI20776-PA 378 GI20776-PA 152..363 515..728 354 35.7 Plus
Dmoj\GI20830-PA 239 GI20830-PA 23..202 534..709 350 37.6 Plus
Dmoj\GI18820-PA 211 GI18820-PA 4..169 549..712 339 38.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 04:45:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17015-PA 784 GL17015-PA 22..784 51..799 2981 74.9 Plus
Dper\GL11776-PA 236 GL11776-PA 9..181 539..709 369 42.3 Plus
Dper\GL26064-PA 458 GL26064-PA 87..409 402..709 365 29.6 Plus
Dper\GL26043-PA 453 GL26043-PA 103..415 395..709 349 29.3 Plus
Dper\GL18754-PA 239 GL18754-PA 15..197 544..709 338 37.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:45:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14565-PA 784 GA14565-PA 22..784 51..799 2934 74.5 Plus
Dpse\GA15749-PA 293 GA15749-PA 33..238 513..709 357 38.3 Plus
Dpse\GA25254-PA 366 GA25254-PA 16..328 395..709 346 29.3 Plus
Dpse\GA25398-PA 368 GA25398-PA 72..328 440..709 336 31.8 Plus
Dpse\GA25261-PA 262 GA25261-PA 46..213 547..709 329 39.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:45:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21425-PA 802 GM21425-PA 1..802 1..799 3875 94.1 Plus
Dsec\GM20674-PA 418 GM20674-PA 203..373 548..712 344 40.1 Plus
Dsec\GM15883-PA 292 GM15883-PA 50..279 521..744 337 33.3 Plus
Dsec\GM14577-PA 227 GM14577-PA 22..193 539..709 330 37.4 Plus
Dsec\GM19278-PA 613 GM19278-PA 398..604 554..738 321 36.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 04:45:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10921-PA 498 GD10921-PA 9..498 308..799 2645 98.6 Plus
Dsim\GD10920-PA 278 GD10920-PA 3..226 27..250 1116 97.8 Plus
Dsim\GD11645-PA 292 GD11645-PA 50..238 521..709 340 39.2 Plus
Dsim\GD17373-PA 358 GD17373-PA 47..342 468..723 305 29.1 Plus
Dsim\GD11489-PA 192 GD11489-PA 16..160 572..717 285 39.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 04:45:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22187-PA 782 GJ22187-PA 1..782 36..799 2769 69.3 Plus
Dvir\GJ21847-PA 226 GJ21847-PA 9..226 539..748 374 36.4 Plus
Dvir\GJ19208-PA 474 GJ19208-PA 231..452 504..716 361 34.6 Plus
Dvir\GJ17863-PA 209 GJ17863-PA 24..205 563..734 356 36.8 Plus
Dvir\GJ20563-PA 242 GJ20563-PA 31..205 539..709 347 38.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 04:45:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15586-PA 754 GK15586-PA 6..747 30..768 2652 68.1 Plus
Dwil\GK21394-PA 313 GK21394-PA 63..235 539..709 344 38.1 Plus
Dwil\GK15074-PA 332 GK15074-PA 129..326 549..734 339 35 Plus
Dwil\GK24749-PA 282 GK24749-PA 106..278 573..734 334 38.2 Plus
Dwil\GK15546-PA 211 GK15546-PA 11..207 550..734 333 35.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 04:45:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12496-PA 809 GE12496-PA 1..809 1..799 3897 93.9 Plus
Dyak\GE12242-PA 288 GE12242-PA 32..238 517..709 343 39 Plus
Dyak\GE22879-PA 418 GE22879-PA 204..374 548..712 337 39.5 Plus
Dyak\GE24720-PA 227 GE24720-PA 22..193 539..709 328 37.4 Plus
Dyak\GE15425-PA 335 GE15425-PA 35..332 423..736 303 27.3 Plus

RE38281.hyp Sequence

Translation from 319 to 2718

> RE38281.hyp
MRDWQTFPDLQKKKVSRDHLNCPATMAGSNVLWPILLAVVLLQISVAFVS
GAASGGVVLSDVNNMLRDAKVVTSEKPVVHSKQETEAPESSVELLRFVDD
DEDSEDISSIERQDGRTMESKKMADQVRLLTKQLNALMLRRREDYEMLEH
NLRKSLRLTTNANSVDADMRSELNQLREELAALRSSQSGNKERLTVEWLQ
QTISEIRKQLVDLQRTASNVAQDVQQRSSTFEDLATIRSDYQQLKLDLAA
QRERQQQTEVYVQELREEMLQQEQDFQHALVKLQQRTRKDGSSASVEEES
GSQEANQEQTGLETTADHKRRHCRFQSEQIHQLQLAQRNLRRQVNGLRFH
HIDERVRSIEVEQHRIANANFNLSSQIASLDKLHTSMLELLEDVEGLQTK
MDKSIPELRHEISKLEFANAQITSEQSLIREEGTNAARSLQAMAVSVSVL
QEEREGMRKLSANVDQLRTNVDRLQSLVNDEMKNKLTHLNKPHKRPHHQN
VQAQMPQDDSPIDSVLAETLVSELENVETQYEAIINKLPHDCSEVHTQTD
GLHLIAPAGQRHPLMTHCTADGWTTVQRRFDGSADFNRSWADYAQGFGAP
GGEFWIGNEQLHHLTLDNCSRLQVQMQDIYDNVWVAEYKRFYISSRADGY
RLHIAEYSGNASDALNYQQGMQFSAIDDDRDISQTHCAANYEGGWWFSHC
QHANLNGRYNLGLTWFDAARNEWIAVKSSRMLVKRLPAVECQANASASGA
FVSVSGSAADAAPSSGATTTTTTATAAPATVTTPKTNNSVVQFVAAGQA*

RE38281.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:30
Subject Length Description Subject Range Query Range Score Percent Strand
sca-PB 799 CG17579-PB 1..799 1..799 4080 100 Plus
sca-PA 799 CG17579-PA 1..799 1..799 4080 100 Plus
CG30281-PA 291 CG30281-PA 32..283 517..749 339 33.5 Plus
CG8642-PB 429 CG8642-PB 53..384 352..712 334 27.8 Plus
CG31832-PB 227 CG31832-PB 22..193 539..709 315 37.4 Plus