BDGP Sequence Production Resources |
Search the DGRC for RE38722
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 387 |
Well: | 22 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG7916-RA |
Protein status: | RE38722.pep: gold |
Preliminary Size: | 864 |
Sequenced Size: | 959 |
Gene | Date | Evidence |
---|---|---|
CG7916 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7916 | 2002-04-21 | Blastp of sequenced clone |
CG7916 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7916 | 2008-04-29 | Release 5.5 accounting |
CG7916 | 2008-08-15 | Release 5.9 accounting |
CG7916 | 2008-12-18 | 5.12 accounting |
959 bp (959 high quality bases) assembled on 2002-04-21
GenBank Submission: AY113463
> RE38722.complete GATCAGGTGGCTGGCTATACAATGAAAGCTATCGTTTGTGTTTTTGTGAC CCTTTTGGCCTGCGTAGCGGCCTACGATGTGGAGCTGCTCACCGAGGAGC AATGGGACCAGCTGGTGGCGCGTAATCCCGCCAAGCCCGATACTCAGGGT CTGATCTTGAACGGATCGGTGAAGAAGGCCATCAATGGACTGCTGAACCA AATGCCTTGTGGTTGGCCCCAATATGGAATTCCACCACTGGATCCCTACA CCAATGCTGATCTCCGCATCCACTTGGCCGAGTCGGTTGTCGATACCCTG CTGCAGTTCCTGCGCTTCCGTTTCGATGGCCTGGAAGGCATGGAGATCAA GAAGATGAAGGTCAGCTACACCTTTAGCAAGAAGGTCAAGTTCCACTTCA ACTTCCCAGAGCTGAAGGCCAGTGCCCACTATTTGGACACCAACACCTTT GTGAATCTGCTGAAGGAACTGGGATTGTCGGTGCGCTACGAGAGCTCGGG CCCATTGTCCTTCAGCCTGCAGAATCTGTCGATTCAGGGCGAGTTCAAGT ACAAGATGCCCTTCATCTTTGGCTCCATCAAGATCTACAAGTTCAGTTGC GCCGTCGGCTTGGGCGGTGTATCCTCGAACATTGGCGGTGTAATGGGAAA TGGAAGGATCAATGAGTTCATCAACGACATGCTCGACAAGGAGATCCCGG CCTTCATCAATGGCAACCAGGAACAGATCAGCGCCAAGATCGAGGAGATC TTTGTGCCGCTGGCCAATGCGCATCTCACGGGTCACAAGATCTGGTATCT CTTTAGCTTGCTGTCCGCCACCACTGGCAGTTGCAATCCCACTCCCGCTC CCTGGTTGGCCATTGAGTCCAGGAAGCTAGACTAAGGCAACACCAGCCAA TAAAAAGCAATTCAAACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7916-RA | 1041 | CG7916-RA | 50..967 | 2..919 | 4590 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 13845905..13846529 | 294..918 | 3125 | 100 | Plus |
chr2L | 23010047 | chr2L | 13845684..13845849 | 128..293 | 830 | 100 | Plus |
chr2L | 23010047 | chr2L | 13845488..13845613 | 2..127 | 630 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13847175..13847800 | 294..919 | 3130 | 100 | Plus |
2L | 23513712 | 2L | 13846954..13847119 | 128..293 | 830 | 100 | Plus |
2L | 23513712 | 2L | 13846758..13846883 | 2..127 | 630 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13847175..13847800 | 294..919 | 3130 | 100 | Plus |
2L | 23513712 | 2L | 13846954..13847119 | 128..293 | 830 | 100 | Plus |
2L | 23513712 | 2L | 13846758..13846883 | 2..127 | 630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13845487..13845613 | 1..127 | 99 | -> | Plus |
chr2L | 13845684..13845849 | 128..293 | 100 | -> | Plus |
chr2L | 13845905..13846529 | 294..918 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7916-RA | 1..864 | 22..885 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7916-RA | 1..864 | 22..885 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7916-RA | 1..864 | 22..885 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7916-RA | 1..864 | 22..885 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7916-RA | 1..864 | 22..885 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7916-RA | 1..918 | 2..918 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7916-RA | 1..917 | 2..918 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7916-RA | 6..923 | 1..918 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7916-RA | 1..918 | 2..918 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7916-RA | 6..923 | 1..918 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13846757..13846883 | 1..127 | 99 | -> | Plus |
2L | 13846954..13847119 | 128..293 | 100 | -> | Plus |
2L | 13847175..13847799 | 294..918 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13846757..13846883 | 1..127 | 99 | -> | Plus |
2L | 13846954..13847119 | 128..293 | 100 | -> | Plus |
2L | 13847175..13847799 | 294..918 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13846757..13846883 | 1..127 | 99 | -> | Plus |
2L | 13846954..13847119 | 128..293 | 100 | -> | Plus |
2L | 13847175..13847799 | 294..918 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13846757..13846883 | 1..127 | 99 | -> | Plus |
arm_2L | 13846954..13847119 | 128..293 | 100 | -> | Plus |
arm_2L | 13847175..13847799 | 294..918 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13847175..13847799 | 294..918 | 100 | Plus | |
2L | 13846757..13846883 | 1..127 | 99 | -> | Plus |
2L | 13846954..13847119 | 128..293 | 100 | -> | Plus |
Translation from 0 to 884
> RE38722.hyp NQVAGYTMKAIVCVFVTLLACVAAYDVELLTEEQWDQLVARNPAKPDTQG LILNGSVKKAINGLLNQMPCGWPQYGIPPLDPYTNADLRIHLAESVVDTL LQFLRFRFDGLEGMEIKKMKVSYTFSKKVKFHFNFPELKASAHYLDTNTF VNLLKELGLSVRYESSGPLSFSLQNLSIQGEFKYKMPFIFGSIKIYKFSC AVGLGGVSSNIGGVMGNGRINEFINDMLDKEIPAFINGNQEQISAKIEEI FVPLANAHLTGHKIWYLFSLLSATTGSCNPTPAPWLAIESRKLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7916-PA | 287 | CG7916-PA | 1..287 | 8..294 | 1499 | 100 | Plus |
CG7953-PB | 297 | CG7953-PB | 36..296 | 26..285 | 434 | 36.3 | Plus |
CG7953-PA | 297 | CG7953-PA | 36..296 | 26..285 | 434 | 36.3 | Plus |
CG8997-PB | 260 | CG8997-PB | 28..229 | 53..259 | 277 | 31.4 | Plus |
CG8997-PA | 260 | CG8997-PA | 28..229 | 53..259 | 277 | 31.4 | Plus |
Translation from 21 to 884
> RE38722.pep MKAIVCVFVTLLACVAAYDVELLTEEQWDQLVARNPAKPDTQGLILNGSV KKAINGLLNQMPCGWPQYGIPPLDPYTNADLRIHLAESVVDTLLQFLRFR FDGLEGMEIKKMKVSYTFSKKVKFHFNFPELKASAHYLDTNTFVNLLKEL GLSVRYESSGPLSFSLQNLSIQGEFKYKMPFIFGSIKIYKFSCAVGLGGV SSNIGGVMGNGRINEFINDMLDKEIPAFINGNQEQISAKIEEIFVPLANA HLTGHKIWYLFSLLSATTGSCNPTPAPWLAIESRKLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14264-PA | 287 | GF14264-PA | 1..287 | 1..287 | 1337 | 85 | Plus |
Dana\GF14265-PA | 296 | GF14265-PA | 53..295 | 45..278 | 438 | 38.1 | Plus |
Dana\GF15613-PA | 259 | GF15613-PA | 31..229 | 49..252 | 279 | 32.9 | Plus |
Dana\GF14266-PA | 250 | GF14266-PA | 36..230 | 60..259 | 163 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23891-PA | 287 | GG23891-PA | 1..287 | 1..287 | 1465 | 94.1 | Plus |
Dere\GG23892-PA | 297 | GG23892-PA | 54..296 | 45..278 | 441 | 38.1 | Plus |
Dere\GG10175-PA | 261 | GG10175-PA | 28..226 | 46..249 | 281 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11121-PA | 278 | GH11121-PA | 1..278 | 1..278 | 1093 | 69.8 | Plus |
Dgri\GH11122-PA | 301 | GH11122-PA | 37..300 | 16..278 | 426 | 36.3 | Plus |
Dgri\GH10611-PA | 258 | GH10611-PA | 28..229 | 46..252 | 297 | 32.5 | Plus |
Dgri\GH11123-PA | 245 | GH11123-PA | 21..225 | 44..259 | 164 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7916-PA | 287 | CG7916-PA | 1..287 | 1..287 | 1499 | 100 | Plus |
CG7953-PB | 297 | CG7953-PB | 36..296 | 19..278 | 434 | 36.3 | Plus |
CG7953-PA | 297 | CG7953-PA | 36..296 | 19..278 | 434 | 36.3 | Plus |
CG8997-PB | 260 | CG8997-PB | 28..229 | 46..252 | 277 | 31.4 | Plus |
CG8997-PA | 260 | CG8997-PA | 28..229 | 46..252 | 277 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12593-PA | 282 | GI12593-PA | 1..282 | 1..282 | 1079 | 68.1 | Plus |
Dmoj\GI12604-PA | 298 | GI12604-PA | 51..297 | 41..278 | 452 | 37.9 | Plus |
Dmoj\GI17402-PA | 256 | GI17402-PA | 28..229 | 46..252 | 292 | 32.9 | Plus |
Dmoj\GI17403-PA | 245 | GI17403-PA | 46..245 | 60..267 | 179 | 27 | Plus |
Dmoj\GI12614-PA | 249 | GI12614-PA | 37..229 | 60..259 | 165 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21240-PA | 287 | GL21240-PA | 1..285 | 1..285 | 1270 | 79.3 | Plus |
Dper\GL21241-PA | 297 | GL21241-PA | 4..296 | 5..278 | 432 | 34.6 | Plus |
Dper\GL21075-PA | 258 | GL21075-PA | 28..226 | 46..249 | 273 | 29.4 | Plus |
Dper\GL21242-PA | 250 | GL21242-PA | 36..230 | 60..259 | 175 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20684-PA | 287 | GA20684-PA | 1..285 | 1..285 | 1270 | 79.3 | Plus |
Dpse\GA20716-PA | 297 | GA20716-PA | 4..296 | 5..278 | 433 | 35.6 | Plus |
Dpse\GA21464-PA | 258 | GA21464-PA | 28..226 | 46..249 | 274 | 29.4 | Plus |
Dpse\GA20729-PA | 250 | GA20729-PA | 36..230 | 60..259 | 172 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15309-PA | 261 | GM15309-PA | 1..232 | 1..232 | 1218 | 98.7 | Plus |
Dsec\GM15320-PA | 297 | GM15320-PA | 3..296 | 8..278 | 451 | 36.3 | Plus |
Dsec\GM15045-PA | 258 | GM15045-PA | 22..258 | 36..278 | 284 | 28.9 | Plus |
Dsec\GM15330-PA | 250 | GM15330-PA | 36..230 | 60..259 | 158 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23932-PA | 287 | GD23932-PA | 1..287 | 1..287 | 1496 | 97.6 | Plus |
Dsim\GD23933-PA | 289 | GD23933-PA | 3..288 | 8..278 | 420 | 35.3 | Plus |
Dsim\GD23934-PA | 250 | GD23934-PA | 36..230 | 60..259 | 159 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18151-PA | 282 | GJ18151-PA | 1..282 | 1..282 | 1096 | 68.1 | Plus |
Dvir\GJ18152-PA | 301 | GJ18152-PA | 58..300 | 45..278 | 426 | 34.8 | Plus |
Dvir\GJ18080-PA | 256 | GJ18080-PA | 28..226 | 46..249 | 264 | 28.9 | Plus |
Dvir\GJ18083-PA | 247 | GJ18083-PA | 46..242 | 60..264 | 155 | 24.2 | Plus |
Dvir\GJ18153-PA | 251 | GJ18153-PA | 37..231 | 60..259 | 154 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15013-PA | 287 | GK15013-PA | 1..285 | 1..285 | 1218 | 76.1 | Plus |
Dwil\GK15016-PA | 298 | GK15016-PA | 55..297 | 45..278 | 438 | 38.1 | Plus |
Dwil\GK15116-PA | 258 | GK15116-PA | 28..229 | 46..252 | 262 | 29.5 | Plus |
Dwil\GK15017-PA | 253 | GK15017-PA | 39..233 | 60..259 | 148 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18690-PA | 287 | GE18690-PA | 1..287 | 1..287 | 1486 | 96.5 | Plus |
Dyak\GE18691-PA | 297 | GE18691-PA | 54..296 | 45..278 | 458 | 38.9 | Plus |
Dyak\GE11368-PA | 259 | GE11368-PA | 28..229 | 46..252 | 278 | 30.9 | Plus |
Dyak\GE18692-PA | 250 | GE18692-PA | 36..230 | 60..259 | 163 | 27.9 | Plus |