Clone RE39081 Report

Search the DGRC for RE39081

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:390
Well:81
Vector:pFlc-1
Associated Gene/Transcriptexex-RA
Protein status:RE39081.pep: gold
Preliminary Size:1578
Sequenced Size:2389

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8254 2002-01-01 Sim4 clustering to Release 2
CG8254 2002-02-22 Blastp of sequenced clone
CG8254 2003-01-01 Sim4 clustering to Release 3
exex 2008-04-29 Release 5.5 accounting
exex 2008-08-15 Release 5.9 accounting
exex 2008-12-18 5.12 accounting

Clone Sequence Records

RE39081.complete Sequence

2389 bp (2389 high quality bases) assembled on 2002-02-22

GenBank Submission: AY084165

> RE39081.complete
AGTCGTTAATGAGCGCTCGTCGAGTTCGCTTCGCAGGAAATCACAGCTCG
CGTTCGCACGCGTGTTCGTAAAATCGTCGATTTCGAAACGTGTTGGAAAG
TGTTTGGAAATTTTGAGAATATATACATATATTCGAAAGAGTATAGAAAC
TGAACTTTGGTGAACCGAGTGAAGCATGTCCAGTGCCCAAGTGTCGCAAC
AGCCGCCTCCACCGCCGCTGACCGCCAGCAGTAGCACCTCAATGCCGTCG
CAATTGCTACTTAGCCACATTCAGCACCACAGCAGCAGTCTGCACCATCA
GCGCAGTCATCAGCGATCATCGCCACCTGCCCAGGACTACGATCAGGGCA
GCAATCAATCAACACTCTCGCCCAGATCCCAGATAACACCCAGTCCGCCG
GCAGCCAGTCCCACGCATTCGGCGGCCACCACAGGATCACCAGTTAGCAC
CTATACACCGGCCTTGAGTCCCGGTGGTGCACAGGATAGCAGCCAAACGG
AGAGTGGTCAGAGTTCACAGATGCCTCTACTAGTGGCTCCCATGCCCGTG
GGCACTGGTCCGCCACATTCACATCCACCGCCGCCGCATCCTCGTCTCTA
TGTGGAGGGTTTCCCGCCACCGCATCATGTGCCACATCCACATCCCGCCC
TGGGCACCTATCCTCTGCCACGACTGCCCCTTATGTTACCGGCAAATCCA
CCAGGTGTGCCATCGGGAGCGGCTGCACCACCGCCCGTCTCACCGCAACC
CGCTGCCAATCACCTGAGCCACAGTGGAGCCACCATGGCCACAACCACAC
TCCTGCCACCCGCCCAAAGTCAGCCCAAGAAATCCTTCTGCATCGATGCT
TTGCTGGCCAAGAGCCAACACCAGTCGGGTGAGCCACAGCCCATCATTGT
GGATGATCGTCTGGCTGCCCTGCACTATGCCCGGGATCAGGCGGAACTCA
ATCATGCCTTTGTGACCGCCTCCAATGCGGCGGCAGCTGCTCAGGCGGCT
GCCTCGGCCGCCGGCGGCATCAGCGAACAGGAGGCACTGCAGCGCATCCG
GGACTCCAGGGAGTACGACTCACCCAGTCCCGACGGCATGTCGAGATCAG
AGTCGCCCACTTCGTCGCACCGCTCCAGTCCGCCCATCAGTCCCGGTTGT
GAGGATCAGCAGCAGCCCCACGGTGCACTGCATCCCCAGCATCTGTCCAT
GCGCATGTCCGACTTCCACGACGAGTTCAAGAAGCCAATACCACCCCACA
GTCCCATCAGACCCCAGGATTTTCCGCTCTACGCAGGAGGACATCCCTAC
CAGCTGCTGGCCCAAGGTGGATCCGCCTTCCACAGACCTCTGGATCCCTC
AGGGAAACCCATTCCGATACCCATGGGTCATAATTTCATGCCGTCGCAGC
TGCAATTCGAATTCCTGGCCCGCGCCGGAATGCTGCACCATCGAATTCCC
GAACTGGCCGCCTATCCGCATCATGCGATTCTGGGCAAGACCAGGAGACC
ACGAACGGCCTTTACATCGCAGCAACTCCTCGAGCTGGAGAAGCAATTCA
AGCAGAACAAGTATCTGAGTCGGCCCAAACGATTCGAGGTGGCCAGCGGT
CTGATGCTGTCCGAGACGCAGGTGAAGATCTGGTTCCAGAATCGTCGGAT
GAAGTGGAAGCGCTCCAAGAAGGCGCAGCAGGAGGCCAAGGAGCGGGCAA
AGGCCAACCAGCAGCAGCAGCAGCAGCAACAGACGCCCAGTGCCGCCAGT
TAGGAGTTGTAGCAGTAAGGAGAAGCAGCCGGAGGATCTGTTGGATCTGG
AGGAGTGGTCTCCAATCTAGTCATGCCGCGATCAAACCGCCGTCCCACCA
TTAAAACGAGACACCCTGTATTCTTGCCCCCAGTTTCATTCGCGCAATCG
GTCTAAATCTTTTTTGGGTTTTTTGCACTTTGATTTCGCATTATTATTTT
TATTTTGTGCCACAACAACTGGTCACTGTGTGATATATGTGTGTGTATAT
GTAAACAAGAAATATAAATTAAATTCATTACCCCCTTCTTTTTAGCCCCT
TTATGTACATAAACATAAATCTAAATAGGAACACGAACATAAATAACAAA
GTAAACATAAATCTAAACTAAATGAGTAATGCTTAAGTAAATAAATTACA
TTAAATGCGATTAGTTTAGTTGGTAATTTACAATTTGCTTGTGTAATTTG
TGTAAATAATTGTAATTATGTAATTGTAGTATTTAATATTAACGAAAACA
ACAAGAGCCATTAAGAAAAATAACAAATATAAAGTGTATAATAACGCATT
GCGATTGAATTAGTTAATTTTCTAGATTTTATTTTCGAAATCAAAATTGG
AAAAAATAAATAACTAAAAATATAAAAAAAAAAAAAAAA

RE39081.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:25:22
Subject Length Description Subject Range Query Range Score Percent Strand
exex-RA 2407 exex-RA 31..2405 1..2375 11875 100 Plus
Hmx-RC 2691 Hmx-RC 1952..2009 1606..1663 200 89.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:02:55
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 7940330..7941424 1..1095 5475 100 Plus
chr3L 24539361 chr3L 7942688..7943702 1359..2373 4940 99.1 Plus
chr3L 24539361 chr3L 7942288..7942560 1094..1366 1365 100 Plus
chr3R 27901430 chr3R 13392009..13392066 1606..1663 200 89.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:54:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:02:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7948191..7949285 1..1095 5475 100 Plus
3L 28110227 3L 7950549..7951565 1359..2375 5055 99.8 Plus
3L 28110227 3L 7950149..7950421 1094..1366 1365 100 Plus
3R 32079331 3R 17567665..17567722 1606..1663 200 89.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:54:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 7941291..7942385 1..1095 5475 100 Plus
3L 28103327 3L 7943649..7944665 1359..2375 5055 99.8 Plus
3L 28103327 3L 7943249..7943521 1094..1366 1365 100 Plus
3R 31820162 3R 17308496..17308553 1606..1663 200 89.6 Plus
Blast to na_te.dros performed 2019-03-16 02:02:54
Subject Length Description Subject Range Query Range Score Percent Strand
McClintock 6450 McClintock McCLINTOCK 6450bp 891..1186 2009..2295 164 56.4 Plus
roo 9092 roo DM_ROO 9092bp 5135..5439 1983..2294 118 56.3 Plus
transib1 2167 transib1 TRANSIB1 2167bp 1898..1956 2314..2372 115 66.1 Plus

RE39081.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:03:50 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 7940330..7941424 1..1095 100 -> Plus
chr3L 7942290..7942560 1096..1366 100 -> Plus
chr3L 7942696..7943702 1367..2373 96   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:14:21 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
exex-RA 1..1578 176..1753 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:38:05 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
exex-RA 1..1578 176..1753 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:14:26 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
exex-RA 1..1578 176..1753 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:08:39 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
exex-RA 1..1578 176..1753 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:56:32 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
exex-RA 1..1578 176..1753 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:03:12 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
exex-RA 1..2373 1..2373 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:38:05 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
exex-RA 1..2373 1..2373 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:14:26 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
exex-RA 6..2378 1..2373 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:08:40 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
exex-RA 1..2373 1..2373 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:56:32 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
exex-RA 6..2378 1..2373 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:03:50 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7948191..7949285 1..1095 100 -> Plus
3L 7950151..7950421 1096..1366 100 -> Plus
3L 7950557..7951563 1367..2373 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:03:50 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7948191..7949285 1..1095 100 -> Plus
3L 7950151..7950421 1096..1366 100 -> Plus
3L 7950557..7951563 1367..2373 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:03:50 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7948191..7949285 1..1095 100 -> Plus
3L 7950151..7950421 1096..1366 100 -> Plus
3L 7950557..7951563 1367..2373 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:14:26 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7941291..7942385 1..1095 100 -> Plus
arm_3L 7943251..7943521 1096..1366 100 -> Plus
arm_3L 7943657..7944663 1367..2373 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:42:45 Download gff for RE39081.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7941291..7942385 1..1095 100 -> Plus
3L 7943251..7943521 1096..1366 100 -> Plus
3L 7943657..7944663 1367..2373 100   Plus

RE39081.pep Sequence

Translation from 175 to 1752

> RE39081.pep
MSSAQVSQQPPPPPLTASSSTSMPSQLLLSHIQHHSSSLHHQRSHQRSSP
PAQDYDQGSNQSTLSPRSQITPSPPAASPTHSAATTGSPVSTYTPALSPG
GAQDSSQTESGQSSQMPLLVAPMPVGTGPPHSHPPPPHPRLYVEGFPPPH
HVPHPHPALGTYPLPRLPLMLPANPPGVPSGAAAPPPVSPQPAANHLSHS
GATMATTTLLPPAQSQPKKSFCIDALLAKSQHQSGEPQPIIVDDRLAALH
YARDQAELNHAFVTASNAAAAAQAAASAAGGISEQEALQRIRDSREYDSP
SPDGMSRSESPTSSHRSSPPISPGCEDQQQPHGALHPQHLSMRMSDFHDE
FKKPIPPHSPIRPQDFPLYAGGHPYQLLAQGGSAFHRPLDPSGKPIPIPM
GHNFMPSQLQFEFLARAGMLHHRIPELAAYPHHAILGKTRRPRTAFTSQQ
LLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKKA
QQEAKERAKANQQQQQQQQTPSAAS*

RE39081.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:01:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23802-PA 532 GF23802-PA 1..521 1..510 1757 81.5 Plus
Dana\GF17798-PA 790 GF17798-PA 198..275 440..514 237 56.4 Plus
Dana\GF17792-PA 582 GF17792-PA 368..437 440..509 235 55.7 Plus
Dana\GF17795-PA 356 GF17795-PA 95..174 438..517 232 56.2 Plus
Dana\GF17790-PA 447 GF17790-PA 321..383 437..499 227 58.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:01:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14457-PA 524 GG14457-PA 1..524 1..525 2567 95.8 Plus
Dere\GG10269-PA 811 GG10269-PA 223..300 440..514 239 56.4 Plus
Dere\GG10235-PA 353 GG10235-PA 89..168 438..517 232 56.2 Plus
Dere\GG10180-PA 467 GG10180-PA 372..434 437..499 227 58.7 Plus
Dere\GG16810-PA 592 GG16810-PA 399..478 440..519 221 47.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:01:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14983-PA 559 GH14983-PA 1..539 1..510 1406 65.8 Plus
Dgri\GH19484-PA 787 GH19484-PA 169..246 440..514 240 56.4 Plus
Dgri\GH19479-PA 599 GH19479-PA 363..433 440..510 235 54.9 Plus
Dgri\GH18130-PA 314 GH18130-PA 1..95 400..496 225 47.6 Plus
Dgri\GH19481-PA 346 GH19481-PA 83..176 426..517 225 51.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:15:19
Subject Length Description Subject Range Query Range Score Percent Strand
exex-PA 525 CG8254-PA 1..525 1..525 2786 100 Plus
slou-PA 659 CG6534-PA 210..602 131..496 233 26.4 Plus
slou-PB 698 CG6534-PB 210..602 131..496 233 26.4 Plus
Dr-PA 515 CG1897-PA 56..485 1..503 229 25.8 Plus
ems-PA 494 CG2988-PA 18..455 72..506 225 26.3 Plus
zen-PA 353 CG1046-PA 89..168 438..517 222 56.2 Plus
Dfd-PA 586 CG2189-PA 367..467 440..519 221 46.5 Plus
pb-PD 772 CG31481-PD 186..266 437..514 214 55.6 Plus
pb-PC 777 CG31481-PC 191..271 437..514 214 55.6 Plus
pb-PB 777 CG31481-PB 191..271 437..514 214 55.6 Plus
pb-PA 782 CG31481-PA 196..276 437..514 214 55.6 Plus
unpg-PA 485 CG1650-PA 318..378 438..498 211 67.2 Plus
ro-PB 350 CG6348-PB 110..253 332..501 206 37.6 Plus
ro-PA 350 CG6348-PA 110..253 332..501 206 37.6 Plus
Scr-PB 417 CG1030-PB 322..384 437..499 206 58.7 Plus
Scr-PA 417 CG1030-PA 322..384 437..499 206 58.7 Plus
Ubx-PB 346 CG10388-PB 232..338 422..525 205 43.9 Plus
C15-PA 339 CG7937-PA 101..289 308..512 201 32.5 Plus
abd-A-PD 330 CG10325-PD 139..218 440..519 200 47.5 Plus
abd-A-PC 330 CG10325-PC 139..218 440..519 200 47.5 Plus
abd-A-PA 330 CG10325-PA 139..218 440..519 200 47.5 Plus
abd-A-PB 590 CG10325-PB 399..478 440..519 200 47.5 Plus
Ubx-PF 355 CG10388-PF 253..347 431..525 199 45.3 Plus
Antp-PF 365 CG1028-PF 204..348 331..503 199 34.7 Plus
Antp-PE 365 CG1028-PE 204..348 331..503 199 34.7 Plus
Antp-PK 361 CG1028-PK 204..344 331..503 198 34.7 Plus
Antp-PG 361 CG1028-PG 204..344 331..503 198 34.7 Plus
Ubx-PD 363 CG10388-PD 267..355 437..525 198 47.2 Plus
Ubx-PC 372 CG10388-PC 276..364 437..525 198 47.2 Plus
Ubx-PE 380 CG10388-PE 284..372 437..525 198 47.2 Plus
Ubx-PA 389 CG10388-PA 293..381 437..525 198 47.2 Plus
zen2-PB 232 CG1048-PB 22..81 438..497 195 61.7 Plus
zen2-PA 252 CG1048-PA 42..101 438..497 195 61.7 Plus
Antp-PJ 378 CG1028-PJ 200..361 315..503 195 33.7 Plus
Antp-PI 378 CG1028-PI 200..361 315..503 195 33.7 Plus
Antp-PL 378 CG1028-PL 200..361 315..503 195 33.7 Plus
Antp-PM 378 CG1028-PM 200..361 315..503 195 33.7 Plus
HGTX-PA 513 CG13475-PA 59..460 81..507 195 23.5 Plus
lab-PA 629 CG1264-PA 340..591 298..521 195 32.4 Plus
ind-PB 320 CG11551-PB 227..309 439..521 194 49.4 Plus
Antp-PN 374 CG1028-PN 200..357 315..503 194 33.7 Plus
Antp-PD 374 CG1028-PD 200..357 315..503 194 33.7 Plus
lab-PB 213 CG1264-PB 89..175 443..521 193 49.4 Plus
Hmx-PE 592 CG43748-PE 349..550 308..521 193 30.6 Plus
Hmx-PC 592 CG43748-PC 349..550 308..521 193 30.6 Plus
Hmx-PD 718 CG43748-PD 349..550 308..521 193 30.6 Plus
NK7.1-PD 721 CG8524-PD 392..466 438..511 192 50.7 Plus
NK7.1-PC 721 CG8524-PC 392..466 438..511 192 50.7 Plus
NK7.1-PB 721 CG8524-PB 392..466 438..511 192 50.7 Plus
bap-PA 382 CG7902-PA 172..240 436..504 191 55.1 Plus
scro-PF 307 CG17594-PF 89..164 436..517 187 50 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:01:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13145-PA 551 GI13145-PA 32..548 25..525 1312 67.3 Plus
Dmoj\GI24721-PA 773 GI24721-PA 174..254 437..514 239 55.6 Plus
Dmoj\GI24717-PA 592 GI24717-PA 358..428 440..510 235 54.9 Plus
Dmoj\GI24719-PA 336 GI24719-PA 91..172 438..517 229 56.1 Plus
Dmoj\GI24715-PA 418 GI24715-PA 323..385 437..499 228 58.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:01:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18045-PA 593 GL18045-PA 1..557 1..507 1528 71.9 Plus
Dper\GL22044-PA 378 GL22044-PA 85..164 438..517 241 57.5 Plus
Dper\GL22041-PA 602 GL22041-PA 373..442 440..509 237 55.7 Plus
Dper\GL22046-PA 797 GL22046-PA 191..268 440..514 237 56.4 Plus
Dper\GL22040-PA 472 GL22040-PA 333..395 437..499 230 58.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:01:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20934-PA 575 GA20934-PA 1..556 1..510 1588 73.6 Plus
Dpse\zen-PB 357 GA10326-PB 85..164 438..517 243 57.5 Plus
Dpse\Dfd-PA 604 GA15291-PA 373..442 440..509 237 55.7 Plus
Dpse\pb-PA 801 GA16277-PA 191..268 440..514 237 56.4 Plus
Dpse\pb-PB 796 GA16277-PB 186..263 440..514 237 56.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:01:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25007-PA 523 GM25007-PA 1..523 1..525 2659 99.2 Plus
Dsec\GM10530-PA 833 GM10530-PA 246..323 440..514 239 56.4 Plus
Dsec\GM10914-PA 582 GM10914-PA 367..437 440..510 235 54.9 Plus
Dsec\GM10527-PA 351 GM10527-PA 89..168 438..517 228 55 Plus
Dsec\GM10524-PA 525 GM10524-PA 371..433 437..499 226 58.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:01:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14043-PA 321 GD14043-PA 1..321 204..525 1680 99.7 Plus
Dsim\GD19525-PA 789 GD19525-PA 202..279 440..514 239 56.4 Plus
Dsim\GD19895-PA 582 GD19895-PA 367..437 440..510 235 54.9 Plus
Dsim\GD19522-PA 351 GD19522-PA 89..168 438..517 228 55 Plus
Dsim\GD19518-PA 463 GD19518-PA 368..430 437..499 227 58.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:01:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13893-PA 557 GJ13893-PA 30..539 25..509 1419 68.1 Plus
Dvir\GJ23937-PA 780 GJ23937-PA 174..251 440..514 237 56.4 Plus
Dvir\GJ23932-PA 253 GJ23932-PA 40..99 440..499 227 61.7 Plus
Dvir\GJ23929-PA 303 GJ23929-PA 95..157 437..499 225 58.7 Plus
Dvir\zen-PA 340 GJ23935-PA 89..170 438..517 225 54.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:01:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20585-PA 578 GK20585-PA 1..564 1..517 1372 60.5 Plus
Dwil\GK10831-PA 816 GK10831-PA 198..275 440..514 239 56.4 Plus
Dwil\GK12250-PA 233 GK12250-PA 37..111 436..508 230 58.7 Plus
Dwil\GK10829-PA 351 GK10829-PA 77..156 438..517 230 56.2 Plus
Dwil\GK10826-PA 428 GK10826-PA 318..380 437..499 228 58.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:01:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21647-PA 532 GE21647-PA 1..532 1..525 2532 95.1 Plus
Dyak\GE25834-PA 784 GE25834-PA 194..271 440..514 239 56.4 Plus
Dyak\GE24883-PA 588 GE24883-PA 372..442 440..510 236 54.9 Plus
Dyak\GE25830-PA 355 GE25830-PA 89..168 438..517 233 56.2 Plus
Dyak\GE25827-PA 419 GE25827-PA 324..386 437..499 229 58.7 Plus

RE39081.hyp Sequence

Translation from 175 to 1752

> RE39081.hyp
MSSAQVSQQPPPPPLTASSSTSMPSQLLLSHIQHHSSSLHHQRSHQRSSP
PAQDYDQGSNQSTLSPRSQITPSPPAASPTHSAATTGSPVSTYTPALSPG
GAQDSSQTESGQSSQMPLLVAPMPVGTGPPHSHPPPPHPRLYVEGFPPPH
HVPHPHPALGTYPLPRLPLMLPANPPGVPSGAAAPPPVSPQPAANHLSHS
GATMATTTLLPPAQSQPKKSFCIDALLAKSQHQSGEPQPIIVDDRLAALH
YARDQAELNHAFVTASNAAAAAQAAASAAGGISEQEALQRIRDSREYDSP
SPDGMSRSESPTSSHRSSPPISPGCEDQQQPHGALHPQHLSMRMSDFHDE
FKKPIPPHSPIRPQDFPLYAGGHPYQLLAQGGSAFHRPLDPSGKPIPIPM
GHNFMPSQLQFEFLARAGMLHHRIPELAAYPHHAILGKTRRPRTAFTSQQ
LLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKKA
QQEAKERAKANQQQQQQQQTPSAAS*

RE39081.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:43:35
Subject Length Description Subject Range Query Range Score Percent Strand
exex-PA 525 CG8254-PA 1..525 1..525 2786 100 Plus
zen-PA 353 CG1046-PA 89..168 438..517 222 56.2 Plus
Dfd-PA 586 CG2189-PA 367..467 440..519 221 46.5 Plus
pb-PD 772 CG31481-PD 186..266 437..514 214 55.6 Plus
pb-PC 777 CG31481-PC 191..271 437..514 214 55.6 Plus