Clone RE39089 Report

Search the DGRC for RE39089

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:390
Well:89
Vector:pFlc-1
Associated Gene/TranscriptBsg25D-RD
Protein status:RE39089.pep: gold
Sequenced Size:2527

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Bsg25D-RC 2009-06-22 Replacement based on scoring

Clone Sequence Records

RE39089.complete Sequence

2527 bp assembled on 2009-10-09

GenBank Submission: BT100004.1

> RE39089.complete
AGTCTAAATCAAAATGGGAACACGATTGTATTACCGCCGATCCGGCGGTC
AGTTAACAGATCCGATAATTGAGAAGCTAGCCGCTCGTTTTGAGCGTTCA
CTGGTGATTACGGATGAGCCGCTAAACAACACATACATCGAGAGTCCGCC
GGAGTCTTCCGATCGCGAGGTTTCACCCAAACTCGTCGTGGGCACCAAGA
AATACGGTCGCCGGTCTAGGCCACAGCAGGGAATCTACGAGTTATCCGTC
ACGGACTCGGACAATACGGACGAGGACCAGTTGCAGCAGCAGCAAAATCA
GCGAAGCCTCAACGGATGCGATGAGCTGGGAGTTCAGGTGCAACGTTCCT
CGTCCCAGAGCGATCTTCCTGGCAGCCGGCGTCTGCGGTCCGTCCACACC
AGCGGGAGCAAACTGAAGCGTTGTGCTTCACTGCCAGCACGCCGGAAGAT
GAACAGCAACACCACGGGAGCCACTACATCACCGACGGCAGCGGCCAAGT
TGAAACAGCTTTCCATCCAGAGCCAGGCGCAGCACAGCAGCAGCGTGGAA
TCACTGGACACCGTGACGCCGCAGCAATTGGAGACGATCTCAGTGCATAG
CATTATGGAAGCCTGGGAGCTGGCCAGCATTCCCAACACTCGCAACCTAC
TTCACGTCCTGGGATTCGATGAGGAGGAGGAGGTGAACCTGCAGCAGCTA
ACTAAGGCATTGGAGGAGGAGCTGCGGGGCATCGATGGGGATCACGAGCA
ATCGAATATGTTGCGCGCTCTGGCTGCTCTGCAGGCCACCGAGTTGGGCA
ACTACAGACTTGCCTATAGGCAGCAGCATGAGGAGAACCTCAAGCTGAGG
GCCGATAATAAGGCGGCCAACCAAAGGGTGGCTTTGCTTGCCGTGGAAGT
GGATGAGCGGCATGCGTCGCTGGAGGATAACTCCAAGAAGCAGGTGCAGC
AGCTGGAGCAAAGACACGCCAGCATGGTGCGTGAAATAACGCTGCGGATG
ACTAATGACCGCGATCACTGGACCAGCATGACGGGAAAGCTGGAGGCACA
GCTTAAATCGCTTGAGCAGGAGGAGATCCGTCTGAGAACGGAACTTGAAC
TGGTGCGCACTGAGAACACGGAGCTTGAGTCGGAGCAGCAAAAGGCTCAC
ATCCAAATCACAGAGCTTCTCGAACAGAACATTAAGCTCAACCAGGAACT
GGCCCAAACGTCGAGCAGCATTGGTGGCACCCCGGAGCACAGTCCATTGC
GACCGAGAAGGCATAGCGAGGACAAGGAGGAGGAGATGCTCCAGCTAATG
GAGAAGCTGGCTGCTCTTCAAATGGAGAACGCCCAGCTGCGTGACAAGAC
TGACGAACTGACCATCGAAATCGAGAGCTTAAATGTGGAACTAATTCGCT
CGAAAACCAAGGCTAAAAAGCAAGAAAAACAGGAGAAACAAGAGGACCAG
GAGTCGGCGGCCACGGCTACCAAAAGGCGTGGGGATTCGCCGAGCAAAAC
ACATCTAACAGAGGAGAGCCCTCGCTTGGGGAAACAGCGCAAGTGCACCG
AAGGAGAGCAGAGCGATGCCAGCAACAGCGGAGATTGGTTGGCTCTAAAC
TCCGAGCTGCAAAGAAGTCAAAGCCAGGATGAGGAGCTAACAAGCCTTAG
ACAGCGGGTTGCTGAGCTAGAGGAGGAACTCAAGGCTGCAAAGGAAGGCA
GATCTCTCACCCCGGAAAGCCGTTCGAAGGAACTGGAGACCAGTCTAGAG
CAAATGCAGCGTGCCTATGAGGATTGCGAGGACTACTGGCAAACGAAACT
TAGCGAGGAGCGGCAGCTGTTTGAGAAGGAGCGACAGATCTACGAAGATG
AGCAGCACGAGAGCGACAAGAAGTTCACCGAGCTGATGGAAAAGGTGCGC
GAGTACGAGGAGCAGTTCAGCAAGGATGGCCGCCTCTCGCCCATTGATGA
GCGCGATATGCTGGAACAGCAGTACTCGGAATTGGAGGCAGAGGCAGCCC
AGCTGCGCTCGAGTTCCATTCAAATGCTCGAGGAGAAGGCTCAGGAAATC
AGTTCACTGCAATCAGAGATCGAGGATTTGCGACAGAGATTGGGTGAGAG
CGTTGAGATCCTCACAGGCGCCTGTGAACTCACCTCGGAGTCGGTAGCCC
AACTGAGTGCCGAGGCGGGAAAAAGTCCAGCCAGCTCACCCATCAGCTAC
CTCTGGCTGCAGAGCACCATCCAAGAGCCAGCGAAATCGCTTGCCGATTC
CAAGGATGAAGCCACCGCCAGTGCCATCGAATTGCTCGGAGGCTCACCAT
CGCACAAGACAGCCAGCCGGTGAGTATGAGAAGCCTCTCGGTGTGTCCTT
GGTGTGAGCATCCCTGTGTCTTCCTCATAATTTGCACTGTATGTCCTGTA
TATATGTTTCAGTTTTGTCCCTCACATCTAACCATGTCTAATATAAGCTA
ATTTAATCCTTTTAATTGTATGTTTGTGCTTGTTTAATAAATATAATTTA
TATTCATATAGAAAAAAAAAAAAAAAA

RE39089.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:53:56
Subject Length Description Subject Range Query Range Score Percent Strand
Bsg25D.e 2562 Bsg25D.e 1..2514 1..2514 12570 100 Plus
Bsg25D-RC 4066 Bsg25D-RC 1..2319 1..2319 11595 100 Plus
Bsg25D.c 5228 Bsg25D.c 1171..3128 557..2514 9790 100 Plus
Bsg25D.c 5228 Bsg25D.c 623..1090 90..557 2340 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:05:21
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5272926..5274880 2511..557 9775 100 Minus
chr2L 23010047 chr2L 5276032..5276280 340..92 1245 100 Minus
chr2L 23010047 chr2L 5275611..5275833 557..335 1115 100 Minus
chr2L 23010047 chr2L 5276346..5276437 92..1 460 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:54:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:05:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5273824..5275781 2514..557 9790 100 Minus
2L 23513712 2L 5276933..5277181 340..92 1245 100 Minus
2L 23513712 2L 5276512..5276734 557..335 1115 100 Minus
2L 23513712 2L 5277247..5277338 92..1 460 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:50:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5273824..5275781 2514..557 9790 100 Minus
2L 23513712 2L 5276933..5277181 340..92 1245 100 Minus
2L 23513712 2L 5276512..5276734 557..335 1115 100 Minus
2L 23513712 2L 5277247..5277338 92..1 460 100 Minus
Blast to na_te.dros performed on 2019-03-16 17:05:19 has no hits.

RE39089.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:06:40 Download gff for RE39089.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5272956..5274879 558..2481 100 <- Minus
chr2L 5275611..5275830 338..557 100 <- Minus
chr2L 5276035..5276279 93..337 100 <- Minus
chr2L 5276346..5276437 1..92 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:57:19 Download gff for RE39089.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg25D-RC 1..2311 14..2326 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:42:32 Download gff for RE39089.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg25D-RD 1..2310 14..2323 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:27:57 Download gff for RE39089.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg25D-RD 1..2310 14..2323 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:50:19 Download gff for RE39089.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg25D-RD 1..2310 14..2323 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-09 10:17:09 Download gff for RE39089.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg25D-RC 1..2324 1..2326 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:42:32 Download gff for RE39089.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg25D-RD 1..2511 1..2511 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:27:57 Download gff for RE39089.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg25D-RD 4..2514 1..2511 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:50:19 Download gff for RE39089.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg25D-RD 4..2514 1..2511 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:06:40 Download gff for RE39089.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5273827..5275780 558..2511 100 <- Minus
2L 5276512..5276731 338..557 100 <- Minus
2L 5276936..5277180 93..337 100 <- Minus
2L 5277247..5277338 1..92 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:06:40 Download gff for RE39089.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5273827..5275780 558..2511 100 <- Minus
2L 5276512..5276731 338..557 100 <- Minus
2L 5276936..5277180 93..337 100 <- Minus
2L 5277247..5277338 1..92 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:06:40 Download gff for RE39089.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5273827..5275780 558..2511 100 <- Minus
2L 5276512..5276731 338..557 100 <- Minus
2L 5276936..5277180 93..337 100 <- Minus
2L 5277247..5277338 1..92 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:27:57 Download gff for RE39089.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5273827..5275780 558..2511 100 <- Minus
arm_2L 5276512..5276731 338..557 100 <- Minus
arm_2L 5276936..5277180 93..337 100 <- Minus
arm_2L 5277247..5277338 1..92 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:23:48 Download gff for RE39089.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5273827..5275780 558..2511 100 <- Minus
2L 5276512..5276731 338..557 100 <- Minus
2L 5276936..5277180 93..337 100 <- Minus
2L 5277247..5277338 1..92 100   Minus

RE39089.pep Sequence

Translation from 13 to 2322

> RE39089.pep
MGTRLYYRRSGGQLTDPIIEKLAARFERSLVITDEPLNNTYIESPPESSD
REVSPKLVVGTKKYGRRSRPQQGIYELSVTDSDNTDEDQLQQQQNQRSLN
GCDELGVQVQRSSSQSDLPGSRRLRSVHTSGSKLKRCASLPARRKMNSNT
TGATTSPTAAAKLKQLSIQSQAQHSSSVESLDTVTPQQLETISVHSIMEA
WELASIPNTRNLLHVLGFDEEEEVNLQQLTKALEEELRGIDGDHEQSNML
RALAALQATELGNYRLAYRQQHEENLKLRADNKAANQRVALLAVEVDERH
ASLEDNSKKQVQQLEQRHASMVREITLRMTNDRDHWTSMTGKLEAQLKSL
EQEEIRLRTELELVRTENTELESEQQKAHIQITELLEQNIKLNQELAQTS
SSIGGTPEHSPLRPRRHSEDKEEEMLQLMEKLAALQMENAQLRDKTDELT
IEIESLNVELIRSKTKAKKQEKQEKQEDQESAATATKRRGDSPSKTHLTE
ESPRLGKQRKCTEGEQSDASNSGDWLALNSELQRSQSQDEELTSLRQRVA
ELEEELKAAKEGRSLTPESRSKELETSLEQMQRAYEDCEDYWQTKLSEER
QLFEKERQIYEDEQHESDKKFTELMEKVREYEEQFSKDGRLSPIDERDML
EQQYSELEAEAAQLRSSSIQMLEEKAQEISSLQSEIEDLRQRLGESVEIL
TGACELTSESVAQLSAEAGKSPASSPISYLWLQSTIQEPAKSLADSKDEA
TASAIELLGGSPSHKTASR*

RE39089.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:32:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15518-PA 1108 GF15518-PA 60..833 10..769 3150 81.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:32:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24312-PA 1089 GG24312-PA 60..827 10..769 3551 93 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:32:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13539-PA 1137 GH13539-PA 101..871 27..769 2589 68.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:54
Subject Length Description Subject Range Query Range Score Percent Strand
Bsg25D-PD 769 CG14025-PD 1..769 1..769 3823 100 Plus
Bsg25D-PC 1032 CG14025-PC 1..769 1..769 3823 100 Plus
Bsg25D-PF 1071 CG14025-PF 60..820 10..769 3702 98.3 Plus
Bsg25D-PH 820 CG14025-PH 60..820 10..769 3702 98.3 Plus
Bsg25D-PE 1079 CG14025-PE 60..828 10..769 3694 97.3 Plus
Bsg25D-PB 1091 CG14025-PB 60..828 10..769 3694 97.3 Plus
Bsg25D-PG 1118 CG14025-PG 60..855 10..769 3656 94 Plus
zip-PH 1964 CG15792-PH 898..1410 166..700 246 22.7 Plus
zip-PG 1971 CG15792-PG 890..1402 166..700 246 22.7 Plus
zip-PE 1971 CG15792-PE 890..1402 166..700 246 22.7 Plus
zip-PC 1971 CG15792-PC 890..1402 166..700 246 22.7 Plus
zip-PF 1979 CG15792-PF 898..1410 166..700 246 22.7 Plus
zip-PB 2011 CG15792-PB 930..1442 166..700 246 22.7 Plus
zip-PD 2016 CG15792-PD 935..1447 166..700 246 22.7 Plus
zip-PI 2024 CG15792-PI 943..1455 166..700 246 22.7 Plus
zip-PA 2056 CG15792-PA 975..1487 166..700 246 22.7 Plus
CG18304-PC 1813 CG18304-PC 205..927 27..709 216 20.2 Plus
CG18304-PB 1819 CG18304-PB 211..933 27..709 216 20.2 Plus
CLIP-190-PN 1598 CG5020-PN 524..1223 76..748 206 21.4 Plus
CLIP-190-PR 1601 CG5020-PR 527..1226 76..748 206 21.4 Plus
CLIP-190-PP 1623 CG5020-PP 549..1248 76..748 206 21.4 Plus
CLIP-190-PC 1652 CG5020-PC 578..1277 76..748 206 21.4 Plus
CLIP-190-PS 1653 CG5020-PS 579..1278 76..748 206 21.4 Plus
CLIP-190-PM 1668 CG5020-PM 594..1293 76..748 206 21.4 Plus
CLIP-190-PB 1689 CG5020-PB 615..1314 76..748 206 21.4 Plus
CLIP-190-PA 1690 CG5020-PA 616..1315 76..748 206 21.4 Plus
lva-PD 2779 CG6450-PD 868..1571 77..758 202 22.1 Plus
lva-PC 2779 CG6450-PC 868..1571 77..758 202 22.1 Plus
Golgin245-PA 1489 CG3493-PA 548..1225 87..751 197 19.9 Plus
Gmap-PC 1208 CG33206-PC 321..767 179..690 194 22.1 Plus
Gmap-PB 1208 CG33206-PB 321..767 179..690 194 22.1 Plus
Gmap-PA 1398 CG33206-PA 511..957 179..690 194 22.1 Plus
CLIP-190-PN 1598 CG5020-PN 856..1469 35..699 193 21.3 Plus
CLIP-190-PR 1601 CG5020-PR 859..1472 35..699 193 21.3 Plus
CLIP-190-PP 1623 CG5020-PP 881..1494 35..699 193 21.3 Plus
CLIP-190-PC 1652 CG5020-PC 910..1523 35..699 193 21.3 Plus
CLIP-190-PS 1653 CG5020-PS 911..1524 35..699 193 21.3 Plus
CLIP-190-PM 1668 CG5020-PM 926..1539 35..699 193 21.3 Plus
CLIP-190-PB 1689 CG5020-PB 947..1560 35..699 193 21.3 Plus
CLIP-190-PA 1690 CG5020-PA 948..1561 35..699 193 21.3 Plus
brp-PK 1707 CG42344-PK 554..1055 259..710 190 22.4 Plus
Mtor-PB 2346 CG8274-PB 993..1532 124..687 190 21.9 Plus
Mtor-PA 2346 CG8274-PA 993..1532 124..687 190 21.9 Plus
CG18304-PC 1813 CG18304-PC 754..1250 226..708 187 23.1 Plus
CG18304-PB 1819 CG18304-PB 760..1256 226..708 187 23.1 Plus
CG18304-PA 1895 CG18304-PA 836..1332 226..708 187 23.1 Plus
CG18304-PD 1901 CG18304-PD 842..1338 226..708 187 23.1 Plus
CG18304-PA 1895 CG18304-PA 205..860 27..689 186 20.8 Plus
CG18304-PD 1901 CG18304-PD 211..866 27..689 186 20.8 Plus
brp-PI 1397 CG42344-PI 123..745 87..710 186 21.3 Plus
CLIP-190-PN 1598 CG5020-PN 224..805 265..761 184 21.5 Plus
CLIP-190-PP 1623 CG5020-PP 249..830 265..761 184 21.5 Plus
CLIP-190-PC 1652 CG5020-PC 278..859 265..761 184 21.5 Plus
CLIP-190-PA 1690 CG5020-PA 316..897 265..761 184 21.5 Plus
CLIP-190-PM 1668 CG5020-PM 343..875 307..761 183 22.1 Plus
CLIP-190-PB 1689 CG5020-PB 364..896 307..761 183 22.1 Plus
Golgin245-PA 1489 CG3493-PA 691..1341 71..702 183 19.6 Plus
CLIP-190-PR 1601 CG5020-PR 277..808 308..761 181 22 Plus
GCC185-PB 1135 CG3532-PB 325..890 163..724 181 21.7 Plus
zip-PH 1964 CG15792-PH 1068..1729 85..720 178 20.6 Plus
zip-PG 1971 CG15792-PG 1060..1721 85..720 178 20.6 Plus
zip-PE 1971 CG15792-PE 1060..1721 85..720 178 20.6 Plus
zip-PC 1971 CG15792-PC 1060..1721 85..720 178 20.6 Plus
zip-PF 1979 CG15792-PF 1068..1729 85..720 178 20.6 Plus
zip-PB 2011 CG15792-PB 1100..1761 85..720 178 20.6 Plus
zip-PD 2016 CG15792-PD 1105..1766 85..720 178 20.6 Plus
zip-PI 2024 CG15792-PI 1113..1774 85..720 178 20.6 Plus
zip-PA 2056 CG15792-PA 1145..1806 85..720 178 20.6 Plus
Mhc-PU 1949 CG17927-PU 1036..1669 139..749 178 19.4 Plus
Mhc-PN 1949 CG17927-PN 1036..1669 139..749 178 19.4 Plus
Mhc-PE 1962 CG17927-PE 1036..1669 139..749 178 19.4 Plus
Mhc-PH 1962 CG17927-PH 1036..1669 139..749 178 19.4 Plus
Mhc-PT 1962 CG17927-PT 1036..1669 139..749 178 19.4 Plus
Mhc-PO 1962 CG17927-PO 1036..1669 139..749 178 19.4 Plus
Mhc-PF 1962 CG17927-PF 1036..1669 139..749 178 19.4 Plus
Mhc-PQ 1962 CG17927-PQ 1036..1669 139..749 178 19.4 Plus
Mhc-PI 1962 CG17927-PI 1036..1669 139..749 178 19.4 Plus
Mhc-PG 1962 CG17927-PG 1036..1669 139..749 178 19.4 Plus
Mhc-PA 1962 CG17927-PA 1036..1669 139..749 178 19.4 Plus
Mhc-PD 1962 CG17927-PD 1036..1669 139..749 178 19.4 Plus
lva-PD 2779 CG6450-PD 343..997 89..750 177 18.9 Plus
lva-PC 2779 CG6450-PC 343..997 89..750 177 18.9 Plus
Mhc-PU 1949 CG17927-PU 862..1329 272..755 169 22.8 Plus
Mhc-PN 1949 CG17927-PN 862..1329 272..755 169 22.8 Plus
Mhc-PE 1962 CG17927-PE 862..1329 272..755 169 22.8 Plus
Mhc-PH 1962 CG17927-PH 862..1329 272..755 169 22.8 Plus
Mhc-PT 1962 CG17927-PT 862..1329 272..755 169 22.8 Plus
Mhc-PO 1962 CG17927-PO 862..1329 272..755 169 22.8 Plus
Mhc-PF 1962 CG17927-PF 862..1329 272..755 169 22.8 Plus
Mhc-PQ 1962 CG17927-PQ 862..1329 272..755 169 22.8 Plus
Mhc-PI 1962 CG17927-PI 862..1329 272..755 169 22.8 Plus
Mhc-PG 1962 CG17927-PG 862..1329 272..755 169 22.8 Plus
Mhc-PA 1962 CG17927-PA 862..1329 272..755 169 22.8 Plus
Mhc-PD 1962 CG17927-PD 862..1329 272..755 169 22.8 Plus
CG18304-PC 1813 CG18304-PC 675..1168 219..687 164 21 Plus
CG18304-PB 1819 CG18304-PB 681..1174 219..687 164 21 Plus
Gmap-PA 1398 CG33206-PA 154..642 216..727 164 21.3 Plus
CG18304-PA 1895 CG18304-PA 757..1250 219..687 164 21 Plus
CG18304-PD 1901 CG18304-PD 763..1256 219..687 164 21 Plus
CLIP-190-PS 1653 CG5020-PS 357..1084 56..690 162 18.8 Plus
CLIP-190-PN 1598 CG5020-PN 435..1029 182..690 161 18.1 Plus
CLIP-190-PR 1601 CG5020-PR 438..1032 182..690 161 18.1 Plus
CLIP-190-PP 1623 CG5020-PP 460..1054 182..690 161 18.1 Plus
CLIP-190-PC 1652 CG5020-PC 489..1083 182..690 161 18.1 Plus
CLIP-190-PM 1668 CG5020-PM 505..1099 182..690 161 18.1 Plus
CLIP-190-PB 1689 CG5020-PB 526..1120 182..690 161 18.1 Plus
CLIP-190-PA 1690 CG5020-PA 527..1121 182..690 161 18.1 Plus
lva-PD 2779 CG6450-PD 591..1179 165..695 161 21 Plus
lva-PC 2779 CG6450-PC 591..1179 165..695 161 21 Plus
brp-PK 1707 CG42344-PK 197..628 302..723 160 21.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:32:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10587-PA 1129 GI10587-PA 96..867 23..769 2439 64.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:32:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18560-PA 1128 GL18560-PA 64..851 10..769 2760 73.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:32:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12708-PA 1131 GA12708-PA 61..854 7..769 2808 73.1 Plus
Dpse\GA29183-PA 278 GA29183-PA 61..235 7..167 598 70.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:32:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18030-PA 1082 GM18030-PA 60..820 10..769 3611 93.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:32:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22658-PA 1090 GD22658-PA 60..828 10..769 3781 95.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:32:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21801-PA 1124 GJ21801-PA 98..861 27..769 2360 63.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:32:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24848-PA 1114 GK24848-PA 63..832 10..769 2467 67.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:32:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19006-PA 1090 GE19006-PA 60..828 10..769 3624 93.5 Plus

RE39089.hyp Sequence

Translation from 13 to 2322

> RE39089.hyp
MGTRLYYRRSGGQLTDPIIEKLAARFERSLVITDEPLNNTYIESPPESSD
REVSPKLVVGTKKYGRRSRPQQGIYELSVTDSDNTDEDQLQQQQNQRSLN
GCDELGVQVQRSSSQSDLPGSRRLRSVHTSGSKLKRCASLPARRKMNSNT
TGATTSPTAAAKLKQLSIQSQAQHSSSVESLDTVTPQQLETISVHSIMEA
WELASIPNTRNLLHVLGFDEEEEVNLQQLTKALEEELRGIDGDHEQSNML
RALAALQATELGNYRLAYRQQHEENLKLRADNKAANQRVALLAVEVDERH
ASLEDNSKKQVQQLEQRHASMVREITLRMTNDRDHWTSMTGKLEAQLKSL
EQEEIRLRTELELVRTENTELESEQQKAHIQITELLEQNIKLNQELAQTS
SSIGGTPEHSPLRPRRHSEDKEEEMLQLMEKLAALQMENAQLRDKTDELT
IEIESLNVELIRSKTKAKKQEKQEKQEDQESAATATKRRGDSPSKTHLTE
ESPRLGKQRKCTEGEQSDASNSGDWLALNSELQRSQSQDEELTSLRQRVA
ELEEELKAAKEGRSLTPESRSKELETSLEQMQRAYEDCEDYWQTKLSEER
QLFEKERQIYEDEQHESDKKFTELMEKVREYEEQFSKDGRLSPIDERDML
EQQYSELEAEAAQLRSSSIQMLEEKAQEISSLQSEIEDLRQRLGESVEIL
TGACELTSESVAQLSAEAGKSPASSPISYLWLQSTIQEPAKSLADSKDEA
TASAIELLGGSPSHKTASR*

RE39089.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:33:02
Subject Length Description Subject Range Query Range Score Percent Strand
Bsg25D-PD 769 CG14025-PD 1..769 1..769 3823 100 Plus
Bsg25D-PC 1032 CG14025-PC 1..769 1..769 3823 100 Plus
Bsg25D-PF 1071 CG14025-PF 60..820 10..769 3702 98.3 Plus
Bsg25D-PH 820 CG14025-PH 60..820 10..769 3702 98.3 Plus
Bsg25D-PE 1079 CG14025-PE 60..828 10..769 3694 97.3 Plus