Clone RE39556 Report

Search the DGRC for RE39556

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:395
Well:56
Vector:pFlc-1
Associated Gene/TranscriptCG7091-RB
Protein status:RE39556.pep: gold
Preliminary Size:1743
Sequenced Size:1893

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7091 2001-12-14 Blastp of sequenced clone
CG7091 2002-01-01 Sim4 clustering to Release 2
CG7091 2003-01-01 Sim4 clustering to Release 3
CG7091 2008-04-29 Release 5.5 accounting
CG7091 2008-08-15 Release 5.9 accounting
CG7091 2008-12-18 5.12 accounting

Clone Sequence Records

RE39556.complete Sequence

1893 bp (1893 high quality bases) assembled on 2001-12-14

GenBank Submission: AY071361

> RE39556.complete
GGTTTCGGTGAGAGGGCGACGATAAGCTAGTCGGCAAATCGTGACAAATG
GCAAATAATTTGGCGTTGTAAGATCTCTTACCGATCGCCAGGCGTTTGCA
GTTGCATTGCCGCCGGAATGCCAATCAGTCGCTCCATAGCTGAGGTTACG
CTTTGTTTGCGCCACATTTCCTATTAGTGTAGTGTTTCGTGTATATGTGC
TGGAGGCTGTGCCTCCTCCACCGCTACGCCATGAGCAGCATGTCATGGAC
CCTGCCACGCCTCTCGCAGTCCAGTGCATCCACCGCCCACGGACTAGTGG
GTTCCGTTCGCCTGACCTACGCCATATGTGCCTTTTTGGCAACTTGCCTA
CACGCCGCCATGAGGAACATGCTCGGCATGATCATCCTCAAGATGGTCAT
GCCCCGGCCGGAGGATGCACTGGTCGTTCCAGCGGGGTTGAGTCGCCTAA
CGGAGGGCAATGTCACCTCCACGGGTCGATGTGGATCTCCTCGGGTCGTT
TTCAATCCGCAGATTCAAGAGACTCAGTCGGGCGACTTACCATGGACCCG
AAACCAGGAGCTGACCTTCCCAGGTGTCTACTACTATGGCTACGTGGTTT
CCATCTCGCTATCCGGCTATCTGGCAGATCGGTGCAGCAGCAAGCGGCTG
TTCATCGTGTCCCTGATCTTCGAGGCTGTGGCCTACATACTGCTCCCAGC
AATGGCGCACTCTAGTTTCGAGGCCGGAGTGGTTGATCTGGTCATCTGTG
GTTTACTGGCGGGCTGTGGAAATCCGGCAATGTATAAACTGTTCGTGACC
TGGGCTCATCCCACAGAGAGAACAGCGCTCCTGTCCTTCGCCTACAGTGG
TCTTCTGATGGGCTCCATGTTGGTTTACCCGGTGGCCAGTTATCTGAGCA
ACTTCGGCTGGGAACTGTCCTTCTATGTAGTCGGTGGAGTTGGCCTCTCA
TTCGGCATTGCCTGCTGCTTTCTCGTTTACGACACCGTGGAGCAACATCC
AAGGATATCGAATGAGGAGGTGGATTACCTGAGGCAGGGCAAGAGTCAAT
TGGGACAGCAGCGGCAGCCAGTGGTAACCATTCCCTGGAAGAGCCTGCTC
GCCGCGCCGCCCGTCTACGCCTTCATCCTGACCCACATGTTCCACACCTA
CACCTTCCTGGTGATTGTGCAACTGATGCCGCGATTTATGCGCGAGGCCA
TGGAGTTCGATCTCCGCGAGGTGGGCTTCCTCTCGGCGGCGCCGTATCTG
GGCGGGATCTGCTCGAAGGTGATGTGCATCCTGGGTGGCAGCTATGTGGA
ACGACGCGTGGGTCCTGACCAGAATTGTGTGCGAAGAATGCTGTACGGGA
TCTGCAGCATCCTGACCACTTCTTTGATTGGGGTCATCATCCTGGCTAAT
TGTGATGACAAAATACTAGTACTTGTGATGTTTGCCTTCATGATGGCCAC
TACGGATATGGGTTTCAGTGGCTACTGGCCCACGCTGCTCTACTTTGCGC
CCTCCTTCGCGGGATTGCTATCGGGATTGGCCAATGGAATGGCCCATCTT
TCCGGATTCTTAGCTCCCCATCTTGTGGCCGCTCTGGTCCACACTGGCAG
CAAGGATGAGTGGAATGTGGTGTTGATGACGCTGATTGTCTTTAATACGA
TGGCCATGTTGGTATTTGCATTTTGCAGCAGTACGAACCTACAACCTTGG
GATCCTCGTAGCAGAATGGAGAAAACTGCATCACCAAGTGCTCAGGAATC
AAATAGTTAGCACTTATTTGTTTAAATGTTTTAACTTTTTTGTACTTTCG
AAGCATTTTATTTGTTTACTATAAATGTAGAGTTAATTGTGTTAAAATAA
AAACAAAATAAATGTAAATATACAATATAAAAAAAAAAAAAAA

RE39556.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:45:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG7091.a 2067 CG7091.a 157..2035 1..1879 9395 100 Plus
CG7091-RB 2067 CG7091-RB 157..2035 1..1879 9395 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:12:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8803240..8803766 1..527 2635 100 Plus
chr3R 27901430 chr3R 8804409..8804721 761..1073 1565 100 Plus
chr3R 27901430 chr3R 8804777..8805060 1071..1354 1405 99.6 Plus
chr3R 27901430 chr3R 8805494..8805776 1596..1878 1340 98.2 Plus
chr3R 27901430 chr3R 8805196..8805438 1354..1596 1200 99.6 Plus
chr3R 27901430 chr3R 8804115..8804352 525..762 1190 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:54:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:12:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12978002..12978528 1..527 2635 100 Plus
3R 32079331 3R 12979168..12979480 761..1073 1565 100 Plus
3R 32079331 3R 12979536..12979819 1071..1354 1420 100 Plus
3R 32079331 3R 12980253..12980536 1596..1879 1420 100 Plus
3R 32079331 3R 12979955..12980197 1354..1596 1215 100 Plus
3R 32079331 3R 12978874..12979111 525..762 1190 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:11:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 12718833..12719359 1..527 2635 100 Plus
3R 31820162 3R 12719999..12720311 761..1073 1565 100 Plus
3R 31820162 3R 12721084..12721367 1596..1879 1420 100 Plus
3R 31820162 3R 12720367..12720650 1071..1354 1420 100 Plus
3R 31820162 3R 12720786..12721028 1354..1596 1215 100 Plus
3R 31820162 3R 12719705..12719942 525..762 1190 100 Plus
Blast to na_te.dros performed on 2019-03-16 19:12:08 has no hits.

RE39556.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:13:12 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8803240..8803766 1..527 100 -> Plus
chr3R 8804118..8804351 528..761 100 -> Plus
chr3R 8804410..8804718 762..1070 100 -> Plus
chr3R 8804777..8805059 1071..1353 99 -> Plus
chr3R 8805196..8805437 1354..1595 99 -> Plus
chr3R 8805494..8805776 1596..1878 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:14:37 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
CG7091-RB 1..1530 231..1760 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:12:24 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
CG7091-RB 1..1530 231..1760 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:24:27 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
CG7091-RB 1..1530 231..1760 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:36:36 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
CG7091-RA 1..1566 195..1760 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:02:25 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
CG7091-RB 1..1530 231..1760 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:43:04 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
CG7091-RB 44..1921 1..1878 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:12:24 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
CG7091-RB 44..1921 1..1878 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:24:27 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
CG7091-RB 3..1880 1..1878 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:36:36 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
CG7091-RA 44..1921 1..1878 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:02:25 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
CG7091-RB 3..1880 1..1878 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:13:12 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12978002..12978528 1..527 100 -> Plus
3R 12978877..12979110 528..761 100 -> Plus
3R 12979169..12979477 762..1070 100 -> Plus
3R 12979536..12979818 1071..1353 100 -> Plus
3R 12979955..12980196 1354..1595 100 -> Plus
3R 12980253..12980535 1596..1878 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:13:12 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12978002..12978528 1..527 100 -> Plus
3R 12978877..12979110 528..761 100 -> Plus
3R 12979169..12979477 762..1070 100 -> Plus
3R 12979536..12979818 1071..1353 100 -> Plus
3R 12979955..12980196 1354..1595 100 -> Plus
3R 12980253..12980535 1596..1878 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:13:12 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12978002..12978528 1..527 100 -> Plus
3R 12978877..12979110 528..761 100 -> Plus
3R 12979169..12979477 762..1070 100 -> Plus
3R 12979536..12979818 1071..1353 100 -> Plus
3R 12979955..12980196 1354..1595 100 -> Plus
3R 12980253..12980535 1596..1878 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:24:27 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8803724..8804250 1..527 100 -> Plus
arm_3R 8804599..8804832 528..761 100 -> Plus
arm_3R 8804891..8805199 762..1070 100 -> Plus
arm_3R 8805258..8805540 1071..1353 100 -> Plus
arm_3R 8805677..8805918 1354..1595 100 -> Plus
arm_3R 8805975..8806257 1596..1878 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:14:05 Download gff for RE39556.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12718833..12719359 1..527 100 -> Plus
3R 12719708..12719941 528..761 100 -> Plus
3R 12720000..12720308 762..1070 100 -> Plus
3R 12720367..12720649 1071..1353 100 -> Plus
3R 12720786..12721027 1354..1595 100 -> Plus
3R 12721084..12721366 1596..1878 100   Plus

RE39556.pep Sequence

Translation from 194 to 1759

> RE39556.pep
MCWRLCLLHRYAMSSMSWTLPRLSQSSASTAHGLVGSVRLTYAICAFLAT
CLHAAMRNMLGMIILKMVMPRPEDALVVPAGLSRLTEGNVTSTGRCGSPR
VVFNPQIQETQSGDLPWTRNQELTFPGVYYYGYVVSISLSGYLADRCSSK
RLFIVSLIFEAVAYILLPAMAHSSFEAGVVDLVICGLLAGCGNPAMYKLF
VTWAHPTERTALLSFAYSGLLMGSMLVYPVASYLSNFGWELSFYVVGGVG
LSFGIACCFLVYDTVEQHPRISNEEVDYLRQGKSQLGQQRQPVVTIPWKS
LLAAPPVYAFILTHMFHTYTFLVIVQLMPRFMREAMEFDLREVGFLSAAP
YLGGICSKVMCILGGSYVERRVGPDQNCVRRMLYGICSILTTSLIGVIIL
ANCDDKILVLVMFAFMMATTDMGFSGYWPTLLYFAPSFAGLLSGLANGMA
HLSGFLAPHLVAALVHTGSKDEWNVVLMTLIVFNTMAMLVFAFCSSTNLQ
PWDPRSRMEKTASPSAQESNS*

RE39556.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:19:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16923-PA 506 GF16923-PA 1..506 13..521 1746 64.3 Plus
Dana\GF19301-PA 497 GF19301-PA 1..493 13..513 1526 58.5 Plus
Dana\GF23558-PA 501 GF23558-PA 17..493 37..518 445 27.4 Plus
Dana\GF23204-PA 502 GF23204-PA 70..481 100..521 389 25.3 Plus
Dana\GF21710-PA 481 GF21710-PA 23..474 39..510 378 25.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:19:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19291-PA 509 GG19291-PA 1..509 13..521 2466 91.4 Plus
Dere\GG25027-PA 493 GG25027-PA 17..485 37..518 462 28.1 Plus
Dere\GG15435-PA 502 GG15435-PA 70..481 100..521 413 25.7 Plus
Dere\GG17757-PA 568 GG17757-PA 62..565 24..511 411 25 Plus
Dere\GG23756-PA 496 GG23756-PA 69..481 106..518 358 24.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:19:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18362-PA 507 GH18362-PA 5..507 17..520 1432 54 Plus
Dgri\GH11190-PA 509 GH11190-PA 17..501 37..518 409 25.8 Plus
Dgri\GH14168-PA 505 GH14168-PA 71..485 100..517 383 25.4 Plus
Dgri\GH24108-PA 591 GH24108-PA 138..588 108..519 379 23.9 Plus
Dgri\GH11174-PA 510 GH11174-PA 67..499 85..519 368 25.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG7091-PB 509 CG7091-PB 1..509 13..521 2648 100 Plus
CG3036-PB 493 CG3036-PB 17..470 37..503 489 28 Plus
CG3036-PA 493 CG3036-PA 17..470 37..503 489 28 Plus
MFS10-PB 559 CG4330-PB 53..545 24..502 435 25.3 Plus
MFS10-PC 559 CG4330-PC 53..545 24..502 435 25.3 Plus
MFS10-PA 559 CG4330-PA 53..545 24..502 435 25.3 Plus
MFS9-PA 502 CG4288-PA 70..479 100..519 424 26.2 Plus
MFS9-PB 502 CG4288-PB 70..479 100..519 424 26.2 Plus
MFS3-PA 512 CG4726-PA 94..503 109..511 375 26.3 Plus
dmGlut-PA 496 CG5304-PA 76..481 113..518 373 24.8 Plus
VGlut-PC 632 CG9887-PC 133..532 117..514 373 24.9 Plus
VGlut-PB 632 CG9887-PB 133..532 117..514 373 24.9 Plus
VGlut-PA 632 CG9887-PA 133..532 117..514 373 24.9 Plus
CG9254-PA 481 CG9254-PA 79..476 111..510 363 23.6 Plus
CG15096-PB 475 CG15096-PB 63..475 117..520 362 24.4 Plus
CG15096-PA 491 CG15096-PA 79..491 117..520 362 24.4 Plus
Picot-PD 516 CG8098-PD 80..491 107..512 352 24.4 Plus
Picot-PC 516 CG8098-PC 80..491 107..512 352 24.4 Plus
Picot-PA 516 CG8098-PA 80..491 107..512 352 24.4 Plus
Picot-PB 529 CG8098-PB 93..504 107..512 352 24.4 Plus
MFS14-PC 497 CG15095-PC 85..482 117..509 351 22.1 Plus
MFS14-PA 497 CG15095-PA 85..482 117..509 351 22.1 Plus
MFS14-PB 497 CG15095-PB 85..482 117..509 351 22.1 Plus
MFS15-PB 443 CG15094-PB 13..424 114..514 343 24 Plus
MFS15-PA 497 CG15094-PA 67..478 114..514 343 24 Plus
NaPi-T-PB 524 CG10207-PB 85..469 117..503 343 25.6 Plus
NaPi-T-PA 524 CG10207-PA 85..469 117..503 343 25.6 Plus
MFS12-PB 449 CG8791-PB 17..436 105..521 325 24.4 Plus
MFS12-PC 449 CG8791-PC 17..436 105..521 325 24.4 Plus
MFS12-PA 477 CG8791-PA 45..464 105..521 325 24.4 Plus
CG9864-PB 465 CG9864-PB 65..449 117..503 320 24 Plus
CG9864-PA 465 CG9864-PA 65..449 117..503 320 24 Plus
MFS17-PH 505 CG40263-PH 102..476 129..503 319 24.7 Plus
MFS17-PF 505 CG40263-PF 102..476 129..503 319 24.7 Plus
CG7881-PB 482 CG7881-PB 56..462 117..521 295 23.4 Plus
CG7881-PA 482 CG7881-PA 56..462 117..521 295 23.4 Plus
MFS17-PG 445 CG40263-PG 102..438 129..467 291 25.4 Plus
MFS17-PJ 457 CG40263-PJ 102..438 129..467 291 25.4 Plus
CG30265-PB 485 CG30265-PB 46..447 109..503 289 20.8 Plus
CG30265-PA 485 CG30265-PA 46..447 109..503 289 20.8 Plus
CG6978-PA 479 CG6978-PA 87..473 111..492 287 23.9 Plus
MFS1-PA 497 CG30272-PA 57..468 117..518 284 22.7 Plus
CG3649-PB 486 CG3649-PB 74..469 130..519 282 22.9 Plus
CG9826-PC 495 CG9826-PC 54..462 114..518 271 19.8 Plus
CG9826-PA 495 CG9826-PA 54..462 114..518 271 19.8 Plus
CG12490-PB 479 CG12490-PB 46..447 109..503 266 20.3 Plus
CG9825-PA 485 CG9825-PA 46..453 109..509 259 19.9 Plus
CG2003-PB 492 CG2003-PB 61..461 117..514 251 22.5 Plus
CG2003-PA 492 CG2003-PA 61..461 117..514 251 22.5 Plus
CG18788-PB 540 CG18788-PB 126..500 108..460 223 23.8 Plus
MFS18-PA 439 CG15438-PA 60..429 117..491 206 20.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:19:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23352-PA 499 GI23352-PA 1..496 13..521 1399 53.1 Plus
Dmoj\GI18111-PA 511 GI18111-PA 17..503 37..518 427 26.3 Plus
Dmoj\GI16367-PA 559 GI16367-PA 80..535 39..502 414 25.7 Plus
Dmoj\GI10539-PA 503 GI10539-PA 71..485 100..518 385 25.4 Plus
Dmoj\GI17977-PA 512 GI17977-PA 23..501 33..519 372 25.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:19:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24373-PA 493 GL24373-PA 1..485 13..505 1685 65.8 Plus
Dper\GL18642-PA 494 GL18642-PA 17..486 37..518 467 27.9 Plus
Dper\GL24089-PA 503 GL24089-PA 70..481 100..521 399 26 Plus
Dper\GL15573-PA 514 GL15573-PA 96..505 109..511 374 26.3 Plus
Dper\GL16129-PA 508 GL16129-PA 20..485 39..521 359 23.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:19:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20093-PB 496 GA20093-PB 1..494 13..520 1674 64.1 Plus
Dpse\GA28741-PA 232 GA28741-PA 1..190 13..206 608 62.8 Plus
Dpse\GA15786-PA 494 GA15786-PA 17..486 37..518 470 27.9 Plus
Dpse\GA18084-PA 503 GA18084-PA 70..481 100..521 389 25.8 Plus
Dpse\GA18114-PA 581 GA18114-PA 63..575 24..515 382 23.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:19:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24069-PA 521 GM24069-PA 1..521 1..521 2640 95 Plus
Dsec\GM18500-PA 493 GM18500-PA 17..485 37..518 454 28 Plus
Dsec\GM11603-PA 540 GM11603-PA 62..537 24..511 422 25.2 Plus
Dsec\GM23189-PA 521 GM23189-PA 70..500 100..521 377 24.7 Plus
Dsec\GM26698-PA 677 GM26698-PA 201..662 39..518 365 24.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:19:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18866-PA 521 GD18866-PA 1..521 1..521 2658 96 Plus
Dsim\GD23308-PA 493 GD23308-PA 17..485 37..518 450 27.8 Plus
Dsim\GD17102-PA 540 GD17102-PA 62..537 24..511 425 25.6 Plus
Dsim\GD20062-PA 502 GD20062-PA 70..481 100..521 423 26 Plus
Dsim\GD23809-PA 496 GD23809-PA 20..481 39..518 368 24.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:19:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10345-PA 508 GJ10345-PA 1..503 13..521 1471 55.4 Plus
Dvir\GJ16298-PA 502 GJ16298-PA 17..494 37..518 431 27.3 Plus
Dvir\GJ18125-PA 476 GJ18125-PA 51..475 76..510 392 24.9 Plus
Dvir\GJ16737-PA 571 GJ16737-PA 68..550 37..502 386 25.3 Plus
Dvir\GJ24194-PA 503 GJ24194-PA 71..485 100..519 385 25.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:19:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12217-PA 523 GK12217-PA 1..512 13..521 1445 54.2 Plus
Dwil\GK24471-PA 494 GK24471-PA 17..486 37..518 439 27 Plus
Dwil\GK15279-PA 488 GK15279-PA 24..474 39..504 395 26.6 Plus
Dwil\GK22727-PA 508 GK22727-PA 74..485 100..521 391 25.1 Plus
Dwil\GK10727-PA 507 GK10727-PA 51..496 75..521 374 23.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:19:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26227-PA 528 GE26227-PA 10..528 9..521 2501 91.1 Plus
Dyak\GE18317-PA 493 GE18317-PA 17..485 37..518 437 26.7 Plus
Dyak\GE17047-PA 569 GE17047-PA 62..569 24..519 421 24.9 Plus
Dyak\GE25070-PA 502 GE25070-PA 70..481 100..521 419 26 Plus
Dyak\GE13881-PA 491 GE13881-PA 73..491 114..520 359 25 Plus

RE39556.hyp Sequence

Translation from 194 to 1759

> RE39556.hyp
MCWRLCLLHRYAMSSMSWTLPRLSQSSASTAHGLVGSVRLTYAICAFLAT
CLHAAMRNMLGMIILKMVMPRPEDALVVPAGLSRLTEGNVTSTGRCGSPR
VVFNPQIQETQSGDLPWTRNQELTFPGVYYYGYVVSISLSGYLADRCSSK
RLFIVSLIFEAVAYILLPAMAHSSFEAGVVDLVICGLLAGCGNPAMYKLF
VTWAHPTERTALLSFAYSGLLMGSMLVYPVASYLSNFGWELSFYVVGGVG
LSFGIACCFLVYDTVEQHPRISNEEVDYLRQGKSQLGQQRQPVVTIPWKS
LLAAPPVYAFILTHMFHTYTFLVIVQLMPRFMREAMEFDLREVGFLSAAP
YLGGICSKVMCILGGSYVERRVGPDQNCVRRMLYGICSILTTSLIGVIIL
ANCDDKILVLVMFAFMMATTDMGFSGYWPTLLYFAPSFAGLLSGLANGMA
HLSGFLAPHLVAALVHTGSKDEWNVVLMTLIVFNTMAMLVFAFCSSTNLQ
PWDPRSRMEKTASPSAQESNS*

RE39556.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:18:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG7091-PB 509 CG7091-PB 1..509 13..521 2648 100 Plus
CG3036-PB 493 CG3036-PB 17..470 37..503 489 28 Plus
CG3036-PA 493 CG3036-PA 17..470 37..503 489 28 Plus
MFS10-PB 559 CG4330-PB 53..545 24..502 435 25.3 Plus
MFS10-PC 559 CG4330-PC 53..545 24..502 435 25.3 Plus