BDGP Sequence Production Resources |
Search the DGRC for RE40159
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 401 |
Well: | 59 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG13704-RA |
Protein status: | RE40159.pep: gold |
Preliminary Size: | 423 |
Sequenced Size: | 699 |
Gene | Date | Evidence |
---|---|---|
CG13704 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13704 | 2002-02-22 | Blastp of sequenced clone |
CG13704 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13704 | 2008-04-29 | Release 5.5 accounting |
CG13704 | 2008-08-15 | Release 5.9 accounting |
CG13704 | 2008-12-18 | 5.12 accounting |
699 bp (699 high quality bases) assembled on 2002-02-22
GenBank Submission: AY084166
> RE40159.complete AGTTCCACTTTGGAGTCGACGACGTGCGCGTTACAAACTTGGCTAACAGC TAAAAGCGAACATAAGTTTTTTCGAAAGAACCGACGAAAACGACGGAAAT GAAGTTGGCTAAGAAGTGCTCCACCTACTTGGTGATATGCCTGGTACTGT TGGCCTGCTGCCTGCAAGAATCGGAGGCCACGCGACGTGTGAACCGCGGA CGACGCACCCTTACCCGCAGATACTTCACTGGCCTTGCTATTCCCGGATG GGCTCTCATCGTTTGTGTAGCGGTAGGTGAGCTGCTGATTGGTGGAGCCC TCTACTTCATCCTCAAGAAGGTGATCCTGGACAAGGAACCAGATCAGACG GCGGCCTCCTACACGCCCGCCCAGACTCATGCGACGGCCACACCTTATAC TCCCGCCCAGACTCACGATCCGGCCACGGCCACAACCTATACTCCTGCCC AGACTCATGAGACGGCCAATGTGACTCCCACTCCAACGCATGCCACCGCT ATTGTCTGAGGAGATGTGTACAGATCCAAGTGACCACTTTTGGTTCATAA CCCTTTCCAAATCAGTTCAAATTCCACCATTAACTAGCTTTATTGTCATT TAATCGACACACAAATAGAACCTGTGCCCTTTGTCTACCTTCATTTTCGA ATAAAATTATTTGCCACTTATCTGGCGCCAAACCAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13704-RA | 857 | CG13704-RA | 50..731 | 1..683 | 3375 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 4899886..4900341 | 229..683 | 2185 | 99.1 | Plus |
chr3L | 24539361 | chr3L | 4898360..4898503 | 1..144 | 720 | 100 | Plus |
chr3L | 24539361 | chr3L | 4899747..4899831 | 144..228 | 425 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 4898360..4898503 | 1..144 | 100 | -> | Plus |
chr3L | 4899748..4899831 | 145..228 | 100 | -> | Plus |
chr3L | 4899886..4900341 | 229..684 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13704-RA | 1..411 | 99..509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13704-RA | 1..411 | 99..509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13704-RA | 1..411 | 99..509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13704-RA | 1..411 | 99..509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13704-RA | 1..411 | 99..509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13704-RA | 1..682 | 1..683 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13704-RA | 1..682 | 1..683 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13704-RA | 1..682 | 1..683 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13704-RA | 1..682 | 1..683 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13704-RA | 1..682 | 1..683 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4898900..4899042 | 1..144 | 99 | -> | Plus |
3L | 4900277..4900360 | 145..228 | 100 | -> | Plus |
3L | 4900415..4900869 | 229..684 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4898900..4899042 | 1..144 | 99 | -> | Plus |
3L | 4900277..4900360 | 145..228 | 100 | -> | Plus |
3L | 4900415..4900869 | 229..684 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4898900..4899042 | 1..144 | 99 | -> | Plus |
3L | 4900277..4900360 | 145..228 | 100 | -> | Plus |
3L | 4900415..4900869 | 229..684 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 4898900..4899042 | 1..144 | 99 | -> | Plus |
arm_3L | 4900277..4900360 | 145..228 | 100 | -> | Plus |
arm_3L | 4900415..4900869 | 229..684 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4900415..4900869 | 229..684 | 99 | Plus | |
3L | 4898900..4899042 | 1..144 | 99 | -> | Plus |
3L | 4900277..4900360 | 145..228 | 100 | -> | Plus |
Translation from 98 to 508
> RE40159.pep MKLAKKCSTYLVICLVLLACCLQESEATRRVNRGRRTLTRRYFTGLAIPG WALIVCVAVGELLIGGALYFILKKVILDKEPDQTAASYTPAQTHATATPY TPAQTHDPATATTYTPAQTHETANVTPTPTHATAIV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25096-PA | 124 | GF25096-PA | 1..123 | 1..135 | 519 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15252-PA | 136 | GG15252-PA | 1..136 | 1..136 | 686 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15701-PA | 161 | GH15701-PA | 1..104 | 1..118 | 381 | 70.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13704-PA | 136 | CG13704-PA | 1..136 | 1..136 | 709 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12754-PA | 129 | GI12754-PA | 1..128 | 1..135 | 412 | 63.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18658-PA | 126 | GL18658-PA | 1..87 | 1..87 | 423 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12471-PA | 126 | GA12471-PA | 1..87 | 1..87 | 423 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14685-PA | 136 | GM14685-PA | 1..136 | 1..136 | 688 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13868-PA | 136 | GD13868-PA | 1..136 | 1..136 | 691 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15522-PA | 130 | GJ15522-PA | 1..129 | 1..135 | 395 | 64.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16604-PA | 108 | GK16604-PA | 1..101 | 1..102 | 436 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21472-PA | 136 | GE21472-PA | 1..136 | 1..136 | 684 | 96.3 | Plus |
Translation from 98 to 508
> RE40159.hyp MKLAKKCSTYLVICLVLLACCLQESEATRRVNRGRRTLTRRYFTGLAIPG WALIVCVAVGELLIGGALYFILKKVILDKEPDQTAASYTPAQTHATATPY TPAQTHDPATATTYTPAQTHETANVTPTPTHATAIV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13704-PA | 136 | CG13704-PA | 1..136 | 1..136 | 709 | 100 | Plus |