Clone RE40275 Report

Search the DGRC for RE40275

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:402
Well:75
Vector:pFlc-1
Associated Gene/TranscriptCG4730-RA
Protein status:RE40275.pep: gold
Preliminary Size:1375
Sequenced Size:1507

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4730 2001-12-14 Blastp of sequenced clone
CG4730 2002-01-01 Sim4 clustering to Release 2
CG4730 2003-01-01 Sim4 clustering to Release 3
CG4730 2008-04-29 Release 5.5 accounting
CG4730 2008-08-15 Release 5.9 accounting
CG4730 2008-12-18 5.12 accounting

Clone Sequence Records

RE40275.complete Sequence

1507 bp (1507 high quality bases) assembled on 2001-12-14

GenBank Submission: AY071372

> RE40275.complete
AATTAGGTGGCAACCCTAGCACAGCTATGTTTAGTTTTTCTTCACATTTA
TGGCTAAGAGCGGGGATTTTCAACTGTAAACAAAGAAATGGATCCCCAAA
CATCAAAAGTATGCCAAACGCTTAATTTTACAATAGCAAGGCGAACTGCA
GAAGCTCCCGTGAAGCTTGTATCCCATGAAGTCTCACTTTCAGACAGTAC
TACTTCTTTGGAGCTGAGCAATTGCTGCCGCTTGTGTTTGGAGGAGCCGT
ATCCCAACCAAATGCTGGACATGACCGTCATCTATGACCAGGAGGCGGCG
CTGAGTTACTACGACTGCTACGAGATCTGCACCAAGGAAGACCTGCGGCA
AAATCCCAAAAACGAGCCACGAACCTTGTGCAAACGTTGTGCGGTGGAAC
TGAAATGGGCCTACGACTTCCACAAGAAAATGGCCATTGCCAATCAGCAG
TTGAGGGAGATATTTGTGGCAACCGAAGCCAACACGGAACAGGAAGACGA
CGTGGAGGATGAGGAGAATGAGGCGGATATGAATGAAGAGTTCCTGATGG
AAGAGATTGAGGAGAAGCAGGAAACCCCTATCGACAGCTTAGAGGACATT
GTGCCACGCAATCGGCATACGGGAAAATCCAACTGCAAGTTCTGCCACAA
GGAGTTCAGGAACCATTCCCGCATGGCCAAGCACCAGATGATTCATTTGG
CCAATCGTCCCAACTTTCGTTGCAGCCAGTGCGACCGGGTTTACCTCACA
AAGCAGGCGCTGAAAGTTCACGTCGATTCGAAGCACAGGCAGTCTGGAGT
CCACTGCGACACATGCGGCAAGGTTTTTGCCATTGCCAAAGCCCTGGAGA
TTCATAAACGCTATCATAACAGAGACTTTCCCTATTCCTGTGATCTCTGT
GATCGTCGTTTCGCACAGCGATCCCATTTGACTGTCCACCAGCAGGTTAA
GCACTCTGGATCTCGCTTCATTTGCGAGTTTCCCGGCTGCCAGAAGTCCT
TTACCTCATCTTCATCTCTCAGGAATCACGAGTGCACGCATACGGCCATG
CCATTTGAGTGCGCCCACTGCCATCAGAGCTATCCAGCTCGTAACAAACT
ACGCATGCACCTGGAGCGTAAGCATAACATGGTGGTGCAGATGGAGGACC
TGGAGGAAATGCGAAAGTTTCACATCGTGCGCTCCAAGTTGGTAATGGCA
AAGATTTACTCGGACCAGAAAGAATCACACCATGCCAAAAATGATAGCGC
TGCTATTTCTAAATAAAAAGTATTTAAAACTATTACCAAAACTTAGATAA
TAGCTTAATCTTACACTAACTCGCATCCCATTTTAAATTCCGTAAAATTG
CCTTACAAATATCACATTCAATTTATTTCACACTTTCATTTGGTTATCTT
ACACGGACAGGGATAGATATTCACATACATATATAGATTTTCGATATCAT
AGACAAAATAAATGCTGCTAAATCTGGTGGTATACAAGTTCGAAAAAAAA
AAAAAAA

RE40275.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:44:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG4730-RA 1491 CG4730-RA 3..1491 4..1492 7445 100 Plus
CG4730.a 1513 CG4730.a 98..1503 88..1493 7030 100 Plus
CG4730.b 1430 CG4730.b 119..1420 192..1493 6510 100 Plus
CG4730.a 1513 CG4730.a 4..87 4..87 420 100 Plus
CG4730.b 1430 CG4730.b 26..109 4..87 420 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:53:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 21500562..21501571 1097..88 5050 100 Minus
chr3R 27901430 chr3R 21500106..21500500 1492..1098 1975 100 Minus
chr3R 27901430 chr3R 21501630..21501713 87..4 420 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:54:57 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25677528..25678537 1097..88 5050 100 Minus
3R 32079331 3R 25677071..25677466 1493..1098 1980 100 Minus
3R 32079331 3R 25678596..25678679 87..4 420 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:10:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 25418359..25419368 1097..88 5050 100 Minus
3R 31820162 3R 25417902..25418297 1493..1098 1980 100 Minus
3R 31820162 3R 25419427..25419510 87..4 420 100 Minus
Blast to na_te.dros performed 2019-03-16 05:53:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 1664..1736 271..201 125 70.7 Minus

RE40275.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:53:53 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 21500106..21500500 1098..1492 100 <- Minus
chr3R 21500562..21501571 88..1097 100 <- Minus
chr3R 21501630..21501715 1..87 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:15:02 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
CG4730-RA 1..1179 88..1266 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:10:40 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
CG4730-RA 1..1179 88..1266 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:29:30 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
CG4730-RA 1..1179 88..1266 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:34:50 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
CG4730-RA 1..1179 88..1266 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:09:13 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
CG4730-RA 1..1179 88..1266 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:40:37 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
CG4730-RA 1..1491 2..1492 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:10:40 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
CG4730-RA 1..1491 2..1492 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:29:30 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
CG4730-RA 1..1492 1..1492 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:34:51 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
CG4730-RA 1..1491 2..1492 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:09:13 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
CG4730-RA 1..1492 1..1492 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:53 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25677072..25677466 1098..1492 100 <- Minus
3R 25677528..25678537 88..1097 100 <- Minus
3R 25678596..25678681 1..87 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:53 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25677072..25677466 1098..1492 100 <- Minus
3R 25677528..25678537 88..1097 100 <- Minus
3R 25678596..25678681 1..87 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:53 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25677072..25677466 1098..1492 100 <- Minus
3R 25677528..25678537 88..1097 100 <- Minus
3R 25678596..25678681 1..87 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:29:30 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21502794..21503188 1098..1492 100 <- Minus
arm_3R 21503250..21504259 88..1097 100 <- Minus
arm_3R 21504318..21504403 1..87 98   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:12:05 Download gff for RE40275.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25417903..25418297 1098..1492 100 <- Minus
3R 25418359..25419368 88..1097 100 <- Minus
3R 25419427..25419512 1..87 98   Minus

RE40275.pep Sequence

Translation from 87 to 1265

> RE40275.pep
MDPQTSKVCQTLNFTIARRTAEAPVKLVSHEVSLSDSTTSLELSNCCRLC
LEEPYPNQMLDMTVIYDQEAALSYYDCYEICTKEDLRQNPKNEPRTLCKR
CAVELKWAYDFHKKMAIANQQLREIFVATEANTEQEDDVEDEENEADMNE
EFLMEEIEEKQETPIDSLEDIVPRNRHTGKSNCKFCHKEFRNHSRMAKHQ
MIHLANRPNFRCSQCDRVYLTKQALKVHVDSKHRQSGVHCDTCGKVFAIA
KALEIHKRYHNRDFPYSCDLCDRRFAQRSHLTVHQQVKHSGSRFICEFPG
CQKSFTSSSSLRNHECTHTAMPFECAHCHQSYPARNKLRMHLERKHNMVV
QMEDLEEMRKFHIVRSKLVMAKIYSDQKESHHAKNDSAAISK*

RE40275.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:12:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18239-PA 389 GF18239-PA 1..388 1..378 1174 58.9 Plus
Dana\GF24085-PA 979 GF24085-PA 671..845 177..351 252 34.1 Plus
Dana\GF14504-PA 848 GF14504-PA 175..429 82..341 242 26.9 Plus
Dana\GF24642-PA 526 GF24642-PA 59..270 137..353 228 29.3 Plus
Dana\GF20022-PA 182 GF20022-PA 4..169 177..342 208 32.5 Plus
Dana\GF14504-PA 848 GF14504-PA 327..457 183..314 176 29.6 Plus
Dana\GF24085-PA 979 GF24085-PA 735..849 183..300 166 31.4 Plus
Dana\GF24085-PA 979 GF24085-PA 642..810 174..344 153 23.9 Plus
Dana\GF20022-PA 182 GF20022-PA 60..170 177..286 153 31.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:12:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12229-PA 399 GG12229-PA 1..399 1..392 1784 85.8 Plus
Dere\GG15916-PA 977 GG15916-PA 657..847 177..367 254 34.9 Plus
Dere\GG10387-PA 844 GG10387-PA 169..431 69..341 249 26.4 Plus
Dere\GG13746-PA 574 GG13746-PA 203..450 129..342 247 26.7 Plus
Dere\GG13208-PA 522 GG13208-PA 53..266 130..353 225 29.7 Plus
Dere\GG13746-PA 574 GG13746-PA 340..507 176..341 183 29.1 Plus
Dere\GG10387-PA 844 GG10387-PA 329..459 183..314 177 29.6 Plus
Dere\GG13746-PA 574 GG13746-PA 377..540 183..342 169 27.5 Plus
Dere\GG13746-PA 574 GG13746-PA 226..404 205..353 152 28.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:12:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23310-PA 1093 GH23310-PA 776..946 177..347 261 37.1 Plus
Dgri\GH10804-PA 902 GH10804-PA 292..450 183..341 242 32.3 Plus
Dgri\GH25214-PA 526 GH25214-PA 77..270 166..353 238 32.5 Plus
Dgri\GH15098-PA 526 GH15098-PA 77..270 166..353 238 32.5 Plus
Dgri\GH17084-PA 299 GH17084-PA 2..152 195..347 234 37.4 Plus
Dgri\GH17084-PA 299 GH17084-PA 18..147 183..315 187 30.6 Plus
Dgri\GH10804-PA 902 GH10804-PA 348..478 183..314 174 28.9 Plus
Dgri\GH23310-PA 1093 GH23310-PA 818..951 164..295 161 28.1 Plus
Dgri\GH17084-PA 299 GH17084-PA 24..157 164..295 159 28.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG4730-PC 392 CG4730-PC 1..392 1..392 2115 100 Plus
CG4730-PA 392 CG4730-PA 1..392 1..392 2115 100 Plus
CG4730-PB 334 CG4730-PB 1..334 59..392 1812 100 Plus
CG7372-PA 971 CG7372-PA 574..836 130..362 292 28.9 Plus
Meics-PB 571 CG8474-PB 279..447 174..342 283 31.4 Plus
Meics-PA 583 CG8474-PA 291..459 174..342 283 31.4 Plus
CG11247-PC 522 CG11247-PC 58..266 134..353 273 30 Plus
CG11247-PA 522 CG11247-PA 58..266 134..353 273 30 Plus
CG11247-PB 522 CG11247-PB 58..266 134..353 273 30 Plus
Kr-h1-PA 791 CG45074-PA 219..377 183..341 269 31.2 Plus
Kr-h1-PB 845 CG45074-PB 273..431 183..341 269 31.2 Plus
CG15436-PA 346 CG15436-PA 51..284 97..341 259 25.7 Plus
CG15436-PA 346 CG15436-PA 184..345 183..346 255 31.5 Plus
Neu2-PB 308 CG7204-PB 26..250 88..342 253 28.3 Plus
Neu2-PA 382 CG7204-PA 26..250 88..342 253 28.3 Plus
CG2202-PA 889 CG2202-PA 600..765 183..351 250 31.2 Plus
CG4854-PA 319 CG4854-PA 12..319 47..353 249 25.6 Plus
su(Hw)-PC 941 CG8573-PC 374..543 175..343 249 29.9 Plus
su(Hw)-PB 941 CG8573-PB 374..543 175..343 249 29.9 Plus
su(Hw)-PA 941 CG8573-PA 374..543 175..343 249 29.9 Plus
crol-PC 756 CG14938-PC 316..491 176..347 247 32.2 Plus
crol-PG 878 CG14938-PG 438..613 176..347 247 32.2 Plus
crol-PD 878 CG14938-PD 438..613 176..347 247 32.2 Plus
crol-PF 907 CG14938-PF 467..642 176..347 247 32.2 Plus
crol-PI 962 CG14938-PI 522..697 176..347 247 32.2 Plus
crol-PE 962 CG14938-PE 522..697 176..347 247 32.2 Plus
crol-PA 962 CG14938-PA 522..697 176..347 247 32.2 Plus
crol-PH 686 CG14938-PH 289..466 176..353 246 30.8 Plus
crol-PB 891 CG14938-PB 494..671 176..353 246 30.8 Plus
cg-PC 629 CG8367-PC 159..327 177..346 245 29.7 Plus
cg-PA 671 CG8367-PA 201..369 177..346 245 29.7 Plus
cg-PD 671 CG8367-PD 201..369 177..346 245 29.7 Plus
cg-PF 770 CG8367-PF 294..462 177..346 245 29.7 Plus
cg-PB 772 CG8367-PB 302..470 177..346 245 29.7 Plus
cg-PI 773 CG8367-PI 302..470 177..346 245 29.7 Plus
cg-PM 780 CG8367-PM 309..477 177..346 245 29.7 Plus
cg-PJ 825 CG8367-PJ 302..470 177..346 245 29.7 Plus
cg-PL 837 CG8367-PL 314..482 177..346 245 29.7 Plus
crol-PD 878 CG14938-PD 383..552 177..346 244 31.8 Plus
dwg-PA 592 CG2711-PA 246..524 125..347 244 26.7 Plus
cg-PK 665 CG8367-PK 193..362 177..346 244 29.5 Plus
cg-PN 686 CG8367-PN 208..377 177..346 244 29.5 Plus
CG14711-PA 377 CG14711-PA 7..357 47..342 243 24.5 Plus
crol-PC 756 CG14938-PC 260..430 176..346 243 31 Plus
crol-PG 878 CG14938-PG 382..552 176..346 243 31 Plus
crol-PI 962 CG14938-PI 466..636 176..346 243 31 Plus
crol-PE 962 CG14938-PE 466..636 176..346 243 31 Plus
crol-PA 962 CG14938-PA 466..636 176..346 243 31 Plus
crol-PH 686 CG14938-PH 261..431 176..346 243 31 Plus
crol-PB 891 CG14938-PB 466..636 176..346 243 31 Plus
CG5245-PA 501 CG5245-PA 223..379 183..342 242 31.1 Plus
CG15269-PA 587 CG15269-PA 355..518 181..344 241 32.1 Plus
CG12299-PA 736 CG12299-PA 340..499 183..343 241 30.9 Plus
crol-PI 962 CG14938-PI 354..523 176..346 240 29.3 Plus
crol-PE 962 CG14938-PE 354..523 176..346 240 29.3 Plus
crol-PA 962 CG14938-PA 354..523 176..346 240 29.3 Plus
crol-PB 891 CG14938-PB 354..523 176..346 240 29.3 Plus
pita-PB 623 CG3941-PB 276..442 177..341 240 32.2 Plus
pita-PA 683 CG3941-PA 336..502 177..341 240 32.2 Plus
CG5245-PA 501 CG5245-PA 88..267 159..342 238 27.7 Plus
crol-PH 686 CG14938-PH 317..478 176..332 237 32.7 Plus
crol-PB 891 CG14938-PB 522..683 176..332 237 32.7 Plus
pita-PB 623 CG3941-PB 209..413 141..342 236 26.9 Plus
pita-PA 683 CG3941-PA 269..473 141..342 236 26.9 Plus
CG17568-PA 513 CG17568-PA 217..483 128..354 236 24.9 Plus
CG15269-PA 587 CG15269-PA 377..515 175..314 235 30 Plus
rn-PF 927 CG42277-PF 469..611 210..346 235 32.9 Plus
rn-PE 946 CG42277-PE 488..630 210..346 235 32.9 Plus
rn-PG 952 CG42277-PG 488..630 210..346 235 32.9 Plus
crol-PF 907 CG14938-PF 291..468 167..346 233 29.7 Plus
crol-PF 907 CG14938-PF 383..553 177..347 232 29.3 Plus
CG12299-PA 736 CG12299-PA 256..415 183..343 231 29.4 Plus
CG17328-PA 413 CG17328-PA 9..282 47..346 231 23.2 Plus
CG2202-PA 889 CG2202-PA 573..731 183..344 230 31.1 Plus
cg-PC 629 CG8367-PC 82..308 121..350 227 25.8 Plus
cg-PA 671 CG8367-PA 124..350 121..350 227 25.8 Plus
cg-PD 671 CG8367-PD 124..350 121..350 227 25.8 Plus
cg-PF 770 CG8367-PF 217..443 121..350 227 25.8 Plus
cg-PB 772 CG8367-PB 225..451 121..350 227 25.8 Plus
cg-PI 773 CG8367-PI 225..451 121..350 227 25.8 Plus
cg-PM 780 CG8367-PM 232..458 121..350 227 25.8 Plus
cg-PJ 825 CG8367-PJ 225..451 121..350 227 25.8 Plus
cg-PL 837 CG8367-PL 237..463 121..350 227 25.8 Plus
CG5245-PA 501 CG5245-PA 250..435 183..342 224 29.8 Plus
CG5245-PA 501 CG5245-PA 270..463 177..342 223 28.9 Plus
cg-PK 665 CG8367-PK 114..343 119..350 221 25.2 Plus
CG5245-PA 501 CG5245-PA 334..493 183..344 221 28.8 Plus
crol-PG 878 CG14938-PG 291..467 167..346 218 28.2 Plus
cg-PN 686 CG8367-PN 131..358 121..350 218 25 Plus
crol-PG 878 CG14938-PG 237..411 171..346 217 29.4 Plus
crol-PD 878 CG14938-PD 291..467 167..346 217 28.2 Plus
crol-PH 686 CG14938-PH 205..371 177..342 217 27.8 Plus
Meics-PB 571 CG8474-PB 337..508 176..346 216 28.4 Plus
Meics-PA 583 CG8474-PA 349..520 176..346 216 28.4 Plus
crol-PI 962 CG14938-PI 291..467 167..346 216 27.6 Plus
crol-PE 962 CG14938-PE 291..467 167..346 216 27.6 Plus
crol-PA 962 CG14938-PA 291..467 167..346 216 27.6 Plus
crol-PB 891 CG14938-PB 291..467 167..346 216 27.6 Plus
crol-PC 756 CG14938-PC 344..519 176..346 215 28.3 Plus
crol-PG 878 CG14938-PG 466..641 176..346 215 28.3 Plus
crol-PD 878 CG14938-PD 466..641 176..346 215 28.3 Plus
crol-PF 907 CG14938-PF 495..670 176..346 215 28.3 Plus
crol-PI 962 CG14938-PI 550..725 176..346 215 28.3 Plus
crol-PE 962 CG14938-PE 550..725 176..346 215 28.3 Plus
crol-PA 962 CG14938-PA 550..725 176..346 215 28.3 Plus
crol-PC 756 CG14938-PC 205..370 177..342 212 27.8 Plus
crol-PI 962 CG14938-PI 411..576 177..342 212 27.8 Plus
crol-PE 962 CG14938-PE 411..576 177..342 212 27.8 Plus
crol-PA 962 CG14938-PA 411..576 177..342 212 27.8 Plus
crol-PB 891 CG14938-PB 411..576 177..342 212 27.8 Plus
CG5245-PA 501 CG5245-PA 17..240 136..342 212 27.1 Plus
crol-PI 962 CG14938-PI 237..413 171..347 210 28.7 Plus
crol-PE 962 CG14938-PE 237..413 171..347 210 28.7 Plus
crol-PA 962 CG14938-PA 237..413 171..347 210 28.7 Plus
crol-PB 891 CG14938-PB 237..413 171..347 210 28.7 Plus
crol-PC 756 CG14938-PC 185..345 183..346 207 27.9 Plus
crol-PD 878 CG14938-PD 237..411 171..346 205 28.9 Plus
crol-PF 907 CG14938-PF 237..408 171..342 205 28.4 Plus
crol-PH 686 CG14938-PH 185..346 183..346 203 28.1 Plus
Meics-PB 571 CG8474-PB 374..537 183..342 202 27.5 Plus
Meics-PA 583 CG8474-PA 386..549 183..342 202 27.5 Plus
CG11247-PC 522 CG11247-PC 172..343 177..346 202 28.4 Plus
CG11247-PA 522 CG11247-PA 172..343 177..346 202 28.4 Plus
CG11247-PB 522 CG11247-PB 172..343 177..346 202 28.4 Plus
su(Hw)-PC 941 CG8573-PC 435..619 177..346 202 26.1 Plus
su(Hw)-PB 941 CG8573-PB 435..619 177..346 202 26.1 Plus
su(Hw)-PA 941 CG8573-PA 435..619 177..346 202 26.1 Plus
pita-PB 623 CG3941-PB 190..385 140..342 202 26.5 Plus
pita-PA 683 CG3941-PA 250..445 140..342 202 26.5 Plus
Kr-h1-PA 791 CG45074-PA 262..405 172..314 196 29.7 Plus
Kr-h1-PB 845 CG45074-PB 316..459 172..314 196 29.7 Plus
crol-PC 756 CG14938-PC 178..317 205..346 196 28.7 Plus
Meics-PA 583 CG8474-PA 162..407 119..347 189 26.3 Plus
CG12299-PA 736 CG12299-PA 397..505 183..292 187 30 Plus
su(Hw)-PC 941 CG8573-PC 286..459 177..341 186 32 Plus
su(Hw)-PB 941 CG8573-PB 286..459 177..341 186 32 Plus
su(Hw)-PA 941 CG8573-PA 286..459 177..341 186 32 Plus
CG11247-PC 522 CG11247-PC 229..400 174..343 185 25.3 Plus
CG11247-PA 522 CG11247-PA 229..400 174..343 185 25.3 Plus
CG11247-PB 522 CG11247-PB 229..400 174..343 185 25.3 Plus
crol-PH 686 CG14938-PH 178..318 205..346 185 28.5 Plus
CG2202-PA 889 CG2202-PA 401..620 114..346 182 24.4 Plus
Meics-PB 571 CG8474-PB 158..395 119..347 180 25.9 Plus
CG12299-PA 736 CG12299-PA 250..386 206..342 180 33.1 Plus
pita-PB 623 CG3941-PB 215..331 221..344 180 35.7 Plus
pita-PA 683 CG3941-PA 275..391 221..344 180 35.7 Plus
CG5245-PA 501 CG5245-PA 84..188 240..347 176 35.8 Plus
CG15269-PA 587 CG15269-PA 327..486 183..342 176 27 Plus
crol-PG 878 CG14938-PG 218..327 236..346 172 33.6 Plus
crol-PD 878 CG14938-PD 218..327 236..346 172 33.6 Plus
crol-PF 907 CG14938-PF 218..327 236..346 172 33.6 Plus
crol-PI 962 CG14938-PI 218..327 236..346 172 33.6 Plus
crol-PE 962 CG14938-PE 218..327 236..346 172 33.6 Plus
crol-PA 962 CG14938-PA 218..327 236..346 172 33.6 Plus
crol-PB 891 CG14938-PB 218..327 236..346 172 33.6 Plus
CG5245-PA 501 CG5245-PA 382..490 177..284 166 30.9 Plus
CG15269-PA 587 CG15269-PA 293..434 205..347 161 24.7 Plus
Neu2-PB 308 CG7204-PB 119..195 266..343 157 42.5 Plus
Neu2-PA 382 CG7204-PA 119..195 266..343 157 42.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:12:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10352-PA 386 GI10352-PA 12..363 42..373 1077 57.9 Plus
Dmoj\GI13747-PA 521 GI13747-PA 48..266 119..353 230 27.7 Plus
Dmoj\GI17314-PA 901 GI17314-PA 288..446 183..341 227 31.1 Plus
Dmoj\GI11685-PA 939 GI11685-PA 594..754 182..344 224 30.3 Plus
Dmoj\GI15092-PA 559 GI15092-PA 320..510 182..347 217 29.4 Plus
Dmoj\GI15092-PA 559 GI15092-PA 239..450 127..342 189 27.6 Plus
Dmoj\GI11685-PA 939 GI11685-PA 642..780 174..315 186 30.1 Plus
Dmoj\GI17314-PA 901 GI17314-PA 344..474 183..314 175 28.9 Plus
Dmoj\GI11685-PA 939 GI11685-PA 657..786 164..291 170 28.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:12:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19065-PA 851 GL19065-PA 176..429 78..341 249 26.9 Plus
Dper\GL17891-PA 464 GL17891-PA 148..394 129..342 239 28.7 Plus
Dper\GL20488-PA 270 GL20488-PA 13..178 177..342 236 34.7 Plus
Dper\GL16107-PA 352 GL16107-PA 123..287 177..341 232 33.1 Plus
Dper\GL22304-PA 213 GL22304-PA 6..188 31..233 222 31.6 Plus
Dper\GL16107-PA 352 GL16107-PA 98..260 177..342 195 32.7 Plus
Dper\GL20488-PA 270 GL20488-PA 69..234 177..342 186 31.2 Plus
Dper\GL17891-PA 464 GL17891-PA 279..431 170..324 181 30.6 Plus
Dper\GL20488-PA 270 GL20488-PA 125..265 177..318 178 34.7 Plus
Dper\GL19065-PA 851 GL19065-PA 327..457 183..314 176 29.6 Plus
Dper\GL16107-PA 352 GL16107-PA 207..348 177..319 175 29.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:12:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27446-PB 215 GA27446-PB 6..213 31..258 267 31.2 Plus
Dpse\GA15080-PA 848 GA15080-PA 177..430 78..341 246 26.5 Plus
Dpse\GA26117-PA 423 GA26117-PA 194..358 177..341 236 33.1 Plus
Dpse\GA28526-PA 464 GA28526-PA 148..393 129..343 233 29 Plus
Dpse\GA10863-PA 519 GA10863-PA 58..263 136..353 223 29.7 Plus
Dpse\GA26117-PA 423 GA26117-PA 169..331 177..342 199 32.7 Plus
Dpse\GA26117-PA 423 GA26117-PA 278..419 177..319 178 29.5 Plus
Dpse\GA15080-PA 848 GA15080-PA 328..458 183..314 177 29.6 Plus
Dpse\GA28526-PA 464 GA28526-PA 279..431 170..324 165 29.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:12:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10229-PA 392 GM10229-PA 1..392 1..392 1838 89.1 Plus
Dsec\GM25548-PA 983 GM25548-PA 663..848 177..362 255 35.3 Plus
Dsec\GM24571-PA 575 GM24571-PA 283..451 174..342 250 31.4 Plus
Dsec\GM18603-PA 838 GM18603-PA 180..427 86..341 243 27.3 Plus
Dsec\GM22117-PA 522 GM22117-PA 57..266 137..353 226 30 Plus
Dsec\GM24571-PA 575 GM24571-PA 341..508 176..341 183 29.1 Plus
Dsec\GM18603-PA 838 GM18603-PA 325..455 183..314 176 29.6 Plus
Dsec\GM24571-PA 575 GM24571-PA 378..541 183..342 173 27.5 Plus
Dsec\GM24571-PA 575 GM24571-PA 154..405 119..353 152 24.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:12:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18182-PA 388 GD18182-PA 1..384 1..380 1847 93.2 Plus
Dsim\GD14561-PA 976 GD14561-PA 656..831 177..352 254 36.1 Plus
Dsim\GD12643-PA 575 GD12643-PA 283..451 174..342 251 31.4 Plus
Dsim\GD23387-PA 839 GD23387-PA 181..428 86..341 242 27.3 Plus
Dsim\GD12094-PA 522 GD12094-PA 57..266 137..353 226 30 Plus
Dsim\GD12643-PA 575 GD12643-PA 341..508 176..341 183 29.1 Plus
Dsim\GD23387-PA 839 GD23387-PA 326..456 183..314 176 29.6 Plus
Dsim\GD12643-PA 575 GD12643-PA 378..541 183..342 171 27.5 Plus
Dsim\GD12643-PA 575 GD12643-PA 154..405 119..353 155 26 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:12:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10204-PA 402 GJ10204-PA 12..375 42..373 1047 54 Plus
Dvir\GJ11357-PA 938 GJ11357-PA 596..808 183..369 246 30.9 Plus
Dvir\GJ15822-PA 870 GJ15822-PA 285..443 183..341 231 31.7 Plus
Dvir\GJ14093-PA 520 GJ14093-PA 94..265 183..353 219 31.4 Plus
Dvir\GJ12064-PA 228 GJ12064-PA 11..220 130..342 216 28.1 Plus
Dvir\GJ15822-PA 870 GJ15822-PA 341..471 183..314 174 28.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:12:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14807-PA 1050 GK14807-PA 710..879 177..346 239 33.9 Plus
Dwil\GK14726-PA 913 GK14726-PA 211..463 87..341 236 27 Plus
Dwil\GK14807-PA 1050 GK14807-PA 690..849 183..344 217 29.9 Plus
Dwil\GK17128-PA 549 GK17128-PA 123..294 183..353 215 31.4 Plus
Dwil\GK22797-PA 346 GK22797-PA 5..324 40..348 212 25.1 Plus
Dwil\GK14669-PA 673 GK14669-PA 276..435 183..343 210 30.7 Plus
Dwil\GK14669-PA 673 GK14669-PA 360..519 183..343 198 30.7 Plus
Dwil\GK14669-PA 673 GK14669-PA 389..568 183..350 181 24.6 Plus
Dwil\GK14807-PA 1050 GK14807-PA 774..890 183..299 176 33.9 Plus
Dwil\GK14726-PA 913 GK14726-PA 361..491 183..314 174 28.9 Plus
Dwil\GK17128-PA 549 GK17128-PA 168..371 171..346 156 25.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:12:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10678-PA 398 GE10678-PA 1..398 1..391 1722 82.5 Plus
Dyak\GE20043-PA 573 GE20043-PA 282..450 174..342 254 32.6 Plus
Dyak\GE22262-PA 960 GE22262-PA 640..815 177..352 252 35.6 Plus
Dyak\GE13637-PA 845 GE13637-PA 183..430 86..341 247 27.3 Plus
Dyak\GE18294-PA 346 GE18294-PA 5..311 47..342 232 26.2 Plus
Dyak\GE20043-PA 573 GE20043-PA 340..507 176..341 180 28.5 Plus
Dyak\GE13637-PA 845 GE13637-PA 328..462 183..318 175 29.5 Plus
Dyak\GE20043-PA 573 GE20043-PA 377..540 183..342 170 27.5 Plus

RE40275.hyp Sequence

Translation from 87 to 1265

> RE40275.hyp
MDPQTSKVCQTLNFTIARRTAEAPVKLVSHEVSLSDSTTSLELSNCCRLC
LEEPYPNQMLDMTVIYDQEAALSYYDCYEICTKEDLRQNPKNEPRTLCKR
CAVELKWAYDFHKKMAIANQQLREIFVATEANTEQEDDVEDEENEADMNE
EFLMEEIEEKQETPIDSLEDIVPRNRHTGKSNCKFCHKEFRNHSRMAKHQ
MIHLANRPNFRCSQCDRVYLTKQALKVHVDSKHRQSGVHCDTCGKVFAIA
KALEIHKRYHNRDFPYSCDLCDRRFAQRSHLTVHQQVKHSGSRFICEFPG
CQKSFTSSSSLRNHECTHTAMPFECAHCHQSYPARNKLRMHLERKHNMVV
QMEDLEEMRKFHIVRSKLVMAKIYSDQKESHHAKNDSAAISK*

RE40275.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:26:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG4730-PC 392 CG4730-PC 1..392 1..392 2115 100 Plus
CG4730-PA 392 CG4730-PA 1..392 1..392 2115 100 Plus
CG4730-PB 334 CG4730-PB 1..334 59..392 1812 100 Plus
CG7372-PA 971 CG7372-PA 574..836 130..362 292 28.9 Plus
Meics-PB 571 CG8474-PB 279..447 174..342 283 31.4 Plus