Clone RE40416 Report

Search the DGRC for RE40416

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:404
Well:16
Vector:pFlc-1
Associated Gene/TranscriptMyo95E-RF
Protein status:RE40416.pep: gold
Sequenced Size:4278

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31135 2003-01-01 Sim4 clustering to Release 3
CG31134 2003-01-01 Sim4 clustering to Release 3
CG5501 2004-01-14 Blastp of sequenced clone
Myo95E 2008-04-29 Release 5.5 accounting
Myo95E 2008-08-15 Release 5.9 accounting
Myo95E 2008-12-18 5.12 accounting

Clone Sequence Records

RE40416.complete Sequence

4278 bp (4278 high quality bases) assembled on 2004-01-14

GenBank Submission: BT011452.1

> RE40416.complete
GTCGATGGCTGGGCCACCACTAGTACCCACTGGATGCAAAAATGTCTTTT
CTGAAAAGTTGATGTATTCAAATTCAAATGGTGAACTCGATTTTGGCCGT
TGTCGTTGTTGTCACTACTGCCGTGCACGTTGTAATTGGAGCTGGGAATC
GCGATGGAGCAGGAAATCGGCACCTGGGACTCGGTACTGTTGGAGAACCT
GTCCGAGGATAGTTTCATAAACAACATCCACCAGCGCTATAAGCGCGATC
ACATATATACCTACATTGGAACATCTGTTGTGGCTCTGAATCCATATCAT
CACATATCCGAGCACTCTCTGGACAATGTCCGCAACTATGGCGATAAGGG
CATTTTCCAGCTGCCGCCCCACATATATGGTCTCACAAATCTGGCTTATC
AATCGCTCAAAGATCAGAGCGAGGATCAGTGTGTTCTGCTCACCGGTGAG
AGCGGAGCGGGCAAAACGGAGACTTTTAAAATGATCGTGAACTTTCTGAC
CCACATACAAGATCGCTCCCACTGCCCCCCAACACCGAATGTTTTGCGCA
AGCAATCCTCAACTAGCTCGGCCAGCGGATTGGTGATGCACGCCCACAGG
CGAGCCTCCAGCAGCTGCTCCGGCACTGCCAATTTTATTATATGCAAAAA
CCGGGCGGAAAATCCGTCAGGCAGTGTTTCACGGCGACAAAGTCCATCGC
CAGGACCATCGCAGCGATCGCGGACGCGGGCCGAGAGCATCGAGCGCCAA
AGCAGGCGCCACATGCGGGAGAAAATTGTCGACTTTGATTTCTCACACCA
CAAGAGTAGCGAAAACATCAGCGGCCTTCCTGAATCGCACGCCCACCACA
TGCATCCGACCAAGTCGTGCTTCAAGCACCAGCAGACCCAAGTCAGCGCC
TGCACTGCAATGCCCGCAGCAGCCAAGGGATCGCCCAAATACGCGGTACC
CACCGTGTACGGCGGTTGCCGCCAGTGCGGACACAGCAAGTGTGTCCGTG
CTCAGAGCCTGGAAAAGGAGGAGCGGGATGATCTACGAGGCAGCAACTGC
CGCCTGTCTACCATAGCCACTGCCACCACCAATCCGGCACATCCGCATCG
CGGTAGTTGCTCCAACCTGATGCGCCAGCACTCGACAGAGAGTCAGCCGG
AGCGGGAGCGGGATCGAAGCTCCCTTATGGGGTCCACGCAACGTATATCG
CTGTACGATGCACACAAGCTGAGTAAGGTTCTGGGCGATCTGCCGCCGCC
TCCGCCTAGTTCTGTTTCGCCCACGCCATCGGCCAGCTCTTCGCTGCACA
GGCGTCATAAATCGCCCACGCAACGAATGCGAGAGTGCGTCACCTGTGCG
GATGTGTTCCTGGAGGCCATGGGCAATGCCTGCACCCTGAAAAATAATAA
CTCTAGTCGATATGGAAAGCTATTTGATATCGAAATTGATTTTAAGGGAG
ATCCAATGGGAGTGCACATTACCCATTACCCGTATAACGGACCCTATCAT
TGGAGAGCGAAATTTTCACATCTTTTACCAATTACTATTAGGAGCTGATC
TCCAGTTGCTAAAATCGCTCAAGCTGTATCGAAATGTGGAAAAGTACGAG
CTGCTCCGCAACACAACTGCCATGGAGGAGGACCGCATGAATTTTCATTA
TACGAAGCGATCCTTGGATGTGCTGGGACTTAGTTGTGAAGAGAGCAACT
CCATCTTTCGGGTCATCGCAGTGGTTCTAAAGTTGGGTAACTTTATTTTC
GTACCCATTACTAACATTGATGGAACTGAGGGTTGTCAGGTGTCCAATGT
ATACGAAGTTCAAGAAACAGCACAGCTTCTTAATATGGAAGCCCAAATTC
TCATAAATTGCTTAACCAGAGCGAATAGCACGAACAGCGCTCAAGAGGAT
GTGGGTTGCGAAATGGATGCACGACAAGCAGCTACCAACCGAAACACGCT
GTGTCGCACTCTTTATAGCCGTCTCTTCACGTGGCTGGTGAACAAAATTA
ATGAGTCCCTGAAGTCAACACAGCGCGAAAAGAACCTAGCATTGCTAGAT
TTTTATGGATTCGAAGCGCTGGACCACAACTCATTTGAGCAATTTGCCAT
TAACTACAGCGCGGAAAAGATCCACCAGAATTTTGTGTTTCATGTGCTGC
GTTCGGAGCAAGAGCTCTATATTCGCGAGGGATTGGAATGGTCTCGCATT
GACTATTTCGACAACGAGTCTATTTGCGAGTTAATAGACAAACCCAGCTA
TGGTATATTGAGCTTGATTAATGAACCCCATTTAAATAGCAACGACGCTT
TGCTTTTGCGAGTTCAGCAATGTTGTGCGGGGCATCCCAACTTTATGACC
ACCGGCAGCAATTCCATGTGCTTTCAGATTCGTCATTATGCAAGTAGTGA
ACTACTCAATACATCGGTTTCTCGAAAAGAACTCCGACATGCTGCCGAAG
TACATAAGCGCTGCCTTTTATCAGAGCAAACTTTCTTTGGTGCAAAGCCT
ATTCCCCGAGGGGAATCCCCGTCGACAGGTTACCAAAAAGCCCAGCACGT
TGAGTTCGAATATCCGCACCCAATTGCAGACGCTGCTGGCCATCGTTAAG
CATCGCCGCTCCCACTATGTGTTCTGTATTAAGCCCAACGAGGGCAAGCA
GCCGCACCAGTTCGATATGGCTCTAGTGCAACATCAGGTGCGCTACATGT
CGCTCATGCCGCTGGTCCACCTGTGTCGCACTGGCCATTGCTACCACCTG
TTGCACGTTAAGTTTTTTCATCGCTATAAGTTGCTCAACAGCCTGACGTG
GCCCCACTTTCATGGCGGCAGTCAGGTAGAGGGTATCGCCCTCATAATCC
GTAACCTACCGCTGCCCTCAGCGGAGTTCACGATCGGCACCAAAAATGTG
TTCGTGCGTAGTCCCCGCACCGTATATGAGTTGGAACAGTTTCGCCGCCT
GCGTATTAGCGAGCTGGCCGTGCTTATTCAAACCATGTTCCGAATGTATC
ACGCAAGGAAGCGCTTTCAGCGCATGCGACACAGCCAGATGATCATATCG
AGTGCCTGGCGCACGTGGCGGGCCCGCGAGGAGTATCGGTCCTTGAAGTA
CAAACGACAGGTGAGATGGGCCATCGATATTATAGGCCGCTACTACCGCC
AGTGGAAGATCAGACAGTTCCTTCTGACAATTCCCTTGCGACTGCCACCG
AACACGCTAAGCCCGCTCTCCACCGAATGGCCAGTGGCTCCCGCATTTCT
GGCAGATGCCTCTCGTCATCTTAGGTCCATATACCATCGTTGGAAGTGCT
ACATCTACCGAAACTCCTTTGATCAAACGGCGCGTAATCGAATGCGGGAG
AAGGTCACAGCCAGCATTATCTTCAAGGATCGAAAAGCTTCATATGGACG
AAGTGTGGGTCATCCTTTTGTGGGGGACTACGTGCGACTGCGACACAACC
AGCAGTGGAAAAAGATCTGCGCCGAGACCAACGATCAGTATGTTGTATTC
GCAGACATAATCAACAAGATAGCGCGCTCCAGTGGCAAGTTTGTGCCCAT
TTTGCTGGTGCTATCCACGTCATCGCTTTTGCTGTTGGACCAACGAACGC
TGCAAATTAAGTACAGAGTGCCTGCATCGGAGATTTACCGAATGTCTCTG
AGCCCCTACCTAGATGACATTGCTGTGTTTCACGTAAAAGCGTCTGAATT
TGGACGGAAGAAGGGTGATTTCGTTTTTCAAACGGGTCATGTGATTGAAA
TTGTTACCAAAATGTTTCTGGTCATACAAAATGCCACAGGCAAACCCCCG
GAGATACACATAAGCACTGAATTTGAAGCGAACTTCGGCCAGCAGACTGT
CATCTTTTCGTTCAAATACGGCGGCATGTCGGACTTAGCACAAGGCCCAC
CCAAGGTCACACGCAAGGCGAACCGCATGGAGATAATTGTGTGATCCGCG
ACAGAATCGAAACCTGATCGTGGCAGCTCTTCGAGTCCGCTGCTATCATC
TTCTTCGCCTTAGGCAGAACTCGTGTTCGGCGGAACGTATCCAAAAATTG
TCGCCAGTCATCATGCAATTGCAATTACCATTGCTTTTTGCGGTGGCCGG
GGTCAGTCGACTTTTATATGGTCCCAGGGATCAAAATACAATTTTAGCAA
TATATTCATACAGTCACACTTACAATTTAGTTTCGTTCACAAGTGACAAT
CAGAGTAACCAATTTGTTGTCAGGATTGTGCCAAAAGCAGAAAACTAGAA
TTGTACCAATGGAAAAAAAAAAAAAAAA

RE40416.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:07:46
Subject Length Description Subject Range Query Range Score Percent Strand
Myo95E.b 4794 Myo95E.b 2..4277 1..4274 21295 99.9 Plus
Myo95E.a 4794 Myo95E.a 2..4277 1..4274 21295 99.9 Plus
Myo95E-RF 4319 Myo95E-RF 40..4315 1..4274 21295 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:50:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 19982974..19984013 1414..375 5080 99.2 Minus
chr3R 27901430 chr3R 19980717..19981414 3072..2377 3425 99.7 Minus
chr3R 27901430 chr3R 19979025..19979466 4262..3821 2210 100 Minus
chr3R 27901430 chr3R 19980171..19980503 3403..3071 1650 99.7 Minus
chr3R 27901430 chr3R 19981819..19982142 2128..1805 1620 100 Minus
chr3R 27901430 chr3R 19981473..19981724 2377..2126 1260 100 Minus
chr3R 27901430 chr3R 19984253..19984457 258..57 945 98.5 Minus
chr3R 27901430 chr3R 19979761..19979915 3692..3538 775 100 Minus
chr3R 27901430 chr3R 19982203..19982352 1805..1656 750 100 Minus
chr3R 27901430 chr3R 19979974..19980111 3539..3402 690 100 Minus
chr3R 27901430 chr3R 19979572..19979700 3820..3692 645 100 Minus
chr3R 27901430 chr3R 19984074..19984189 374..259 580 100 Minus
chr3R 27901430 chr3R 19982416..19982510 1657..1563 475 100 Minus
chr3R 27901430 chr3R 19982569..19982653 1562..1478 410 98.8 Minus
chr3R 27901430 chr3R 19982803..19982866 1477..1414 305 98.4 Minus
chr3R 27901430 chr3R 19984768..19984825 58..1 290 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:55:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:50:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24159647..24160686 1414..375 5200 100 Minus
3R 32079331 3R 24157390..24158087 3072..2377 3425 99.7 Minus
3R 32079331 3R 24155686..24156139 4274..3821 2240 99.6 Minus
3R 32079331 3R 24156844..24157176 3403..3071 1665 100 Minus
3R 32079331 3R 24158492..24158815 2128..1805 1620 100 Minus
3R 32079331 3R 24158146..24158397 2377..2126 1260 100 Minus
3R 32079331 3R 24160926..24161127 258..57 1010 100 Minus
3R 32079331 3R 24156434..24156588 3692..3538 775 100 Minus
3R 32079331 3R 24158876..24159025 1805..1656 750 100 Minus
3R 32079331 3R 24156647..24156784 3539..3402 690 100 Minus
3R 32079331 3R 24156245..24156373 3820..3692 645 100 Minus
3R 32079331 3R 24160747..24160862 374..259 580 100 Minus
3R 32079331 3R 24159089..24159183 1657..1563 475 100 Minus
3R 32079331 3R 24159242..24159326 1562..1478 425 100 Minus
3R 32079331 3R 24159476..24159539 1477..1414 320 100 Minus
3R 32079331 3R 24161438..24161495 58..1 290 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:53:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 23900478..23901517 1414..375 5200 100 Minus
3R 31820162 3R 23898221..23898918 3072..2377 3435 99.7 Minus
3R 31820162 3R 23896517..23896970 4274..3821 2240 99.5 Minus
3R 31820162 3R 23897675..23898007 3403..3071 1665 100 Minus
3R 31820162 3R 23899323..23899646 2128..1805 1620 100 Minus
3R 31820162 3R 23898977..23899228 2377..2126 1260 100 Minus
3R 31820162 3R 23901757..23901958 258..57 1010 100 Minus
3R 31820162 3R 23897265..23897419 3692..3538 775 100 Minus
3R 31820162 3R 23899707..23899856 1805..1656 750 100 Minus
3R 31820162 3R 23897478..23897615 3539..3402 690 100 Minus
3R 31820162 3R 23897076..23897204 3820..3692 645 100 Minus
3R 31820162 3R 23901578..23901693 374..259 580 100 Minus
3R 31820162 3R 23899920..23900014 1657..1563 475 100 Minus
3R 31820162 3R 23900073..23900157 1562..1478 425 100 Minus
3R 31820162 3R 23900307..23900370 1477..1414 320 100 Minus
3R 31820162 3R 23902269..23902326 58..1 290 100 Minus
Blast to na_te.dros performed on 2019-03-16 19:50:34 has no hits.

RE40416.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:51:26 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 19982203..19982350 1658..1805 100 <- Minus
chr3R 19982416..19982510 1563..1657 100 <- Minus
chr3R 19982569..19982653 1478..1562 98 <- Minus
chr3R 19982803..19982866 1414..1477 98 <- Minus
chr3R 19979025..19979466 3821..4262 100 <- Minus
chr3R 19979572..19979699 3693..3820 100 <- Minus
chr3R 19979761..19979913 3540..3692 100 <- Minus
chr3R 19979974..19980109 3404..3539 100 <- Minus
chr3R 19980171..19980502 3072..3403 99 <- Minus
chr3R 19980718..19981414 2377..3071 99 <- Minus
chr3R 19981474..19981721 2129..2376 100 <- Minus
chr3R 19981819..19982141 1806..2128 100 <- Minus
chr3R 19982975..19984013 375..1413 99 <- Minus
chr3R 19984074..19984189 259..374 100 <- Minus
chr3R 19984253..19984455 59..258 98 <- Minus
chr3R 19984768..19984825 1..58 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:15:09 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
Myo95E-RB 1..1308 154..1461 100 == Plus
Myo95E-RB 1309..3777 1478..3944 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:41:42 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
Myo95E-RB 1309..3777 1478..3944 99   Plus
Myo95E-RB 1..1308 154..1461 100 == Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:48:16 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
Myo95E-RB 1..1308 154..1461 100 == Plus
Myo95E-RB 1309..3777 1478..3944 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:30:31 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
Myo95E-RB 1..1308 154..1461 100 == Plus
Myo95E-RB 1309..3777 1478..3944 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:43:31 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
Myo95E-RB 1..1308 154..1461 100 == Plus
Myo95E-RB 1309..3777 1478..3944 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:51:06 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
Myo95E-RI 1..4264 1..4262 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:41:41 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
Myo95E-RI 1..4264 1..4262 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:16 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
Myo95E-RF 4..4267 1..4262 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:30:31 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
Myo95E-RI 1..4264 1..4262 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:43:31 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
Myo95E-RF 4..4267 1..4262 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:51:26 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24161438..24161495 1..58 100   Minus
3R 24156844..24157175 3072..3403 100 <- Minus
3R 24155698..24156139 3821..4262 100 <- Minus
3R 24156245..24156372 3693..3820 100 <- Minus
3R 24156434..24156586 3540..3692 100 <- Minus
3R 24156647..24156782 3404..3539 100 <- Minus
3R 24157391..24158087 2377..3071 99 <- Minus
3R 24158147..24158394 2129..2376 100 <- Minus
3R 24158492..24158814 1806..2128 100 <- Minus
3R 24158876..24159023 1658..1805 100 <- Minus
3R 24159089..24159183 1563..1657 100 <- Minus
3R 24159242..24159326 1478..1562 100 <- Minus
3R 24159476..24159539 1414..1477 100 <- Minus
3R 24159648..24160686 375..1413 100 <- Minus
3R 24160747..24160862 259..374 100 <- Minus
3R 24160926..24161125 59..258 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:51:26 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24161438..24161495 1..58 100   Minus
3R 24156844..24157175 3072..3403 100 <- Minus
3R 24155698..24156139 3821..4262 100 <- Minus
3R 24156245..24156372 3693..3820 100 <- Minus
3R 24156434..24156586 3540..3692 100 <- Minus
3R 24156647..24156782 3404..3539 100 <- Minus
3R 24157391..24158087 2377..3071 99 <- Minus
3R 24158147..24158394 2129..2376 100 <- Minus
3R 24158492..24158814 1806..2128 100 <- Minus
3R 24158876..24159023 1658..1805 100 <- Minus
3R 24159089..24159183 1563..1657 100 <- Minus
3R 24159242..24159326 1478..1562 100 <- Minus
3R 24159476..24159539 1414..1477 100 <- Minus
3R 24159648..24160686 375..1413 100 <- Minus
3R 24160747..24160862 259..374 100 <- Minus
3R 24160926..24161125 59..258 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:51:26 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24161438..24161495 1..58 100   Minus
3R 24156844..24157175 3072..3403 100 <- Minus
3R 24155698..24156139 3821..4262 100 <- Minus
3R 24156245..24156372 3693..3820 100 <- Minus
3R 24156434..24156586 3540..3692 100 <- Minus
3R 24156647..24156782 3404..3539 100 <- Minus
3R 24157391..24158087 2377..3071 99 <- Minus
3R 24158147..24158394 2129..2376 100 <- Minus
3R 24158492..24158814 1806..2128 100 <- Minus
3R 24158876..24159023 1658..1805 100 <- Minus
3R 24159089..24159183 1563..1657 100 <- Minus
3R 24159242..24159326 1478..1562 100 <- Minus
3R 24159476..24159539 1414..1477 100 <- Minus
3R 24159648..24160686 375..1413 100 <- Minus
3R 24160747..24160862 259..374 100 <- Minus
3R 24160926..24161125 59..258 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:16 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19987160..19987217 1..58 100   Minus
arm_3R 19981420..19981861 3821..4262 100 <- Minus
arm_3R 19981967..19982094 3693..3820 100 <- Minus
arm_3R 19982156..19982308 3540..3692 100 <- Minus
arm_3R 19982369..19982504 3404..3539 100 <- Minus
arm_3R 19982566..19982897 3072..3403 100 <- Minus
arm_3R 19983113..19983809 2377..3071 99 <- Minus
arm_3R 19983869..19984116 2129..2376 100 <- Minus
arm_3R 19984214..19984536 1806..2128 100 <- Minus
arm_3R 19984598..19984745 1658..1805 100 <- Minus
arm_3R 19984811..19984905 1563..1657 100 <- Minus
arm_3R 19984964..19985048 1478..1562 100 <- Minus
arm_3R 19985198..19985261 1414..1477 100 <- Minus
arm_3R 19985370..19986408 375..1413 100 <- Minus
arm_3R 19986469..19986584 259..374 100 <- Minus
arm_3R 19986648..19986847 59..258 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:03:01 Download gff for RE40416.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23901757..23901956 59..258 100 <- Minus
3R 23902269..23902326 1..58 100   Minus
3R 23897478..23897613 3404..3539 100 <- Minus
3R 23901578..23901693 259..374 100 <- Minus
3R 23896529..23896970 3821..4262 100 <- Minus
3R 23897076..23897203 3693..3820 100 <- Minus
3R 23897265..23897417 3540..3692 100 <- Minus
3R 23897675..23898006 3072..3403 100 <- Minus
3R 23898222..23898918 2377..3071 99 <- Minus
3R 23898978..23899225 2129..2376 100 <- Minus
3R 23899323..23899645 1806..2128 100 <- Minus
3R 23899707..23899854 1658..1805 100 <- Minus
3R 23899920..23900014 1563..1657 100 <- Minus
3R 23900073..23900157 1478..1562 100 <- Minus
3R 23900307..23900370 1414..1477 100 <- Minus
3R 23900479..23901517 375..1413 100 <- Minus

RE40416.pep Sequence

Translation from 153 to 1547

> RE40416.pep
MEQEIGTWDSVLLENLSEDSFINNIHQRYKRDHIYTYIGTSVVALNPYHH
ISEHSLDNVRNYGDKGIFQLPPHIYGLTNLAYQSLKDQSEDQCVLLTGES
GAGKTETFKMIVNFLTHIQDRSHCPPTPNVLRKQSSTSSASGLVMHAHRR
ASSSCSGTANFIICKNRAENPSGSVSRRQSPSPGPSQRSRTRAESIERQS
RRHMREKIVDFDFSHHKSSENISGLPESHAHHMHPTKSCFKHQQTQVSAC
TAMPAAAKGSPKYAVPTVYGGCRQCGHSKCVRAQSLEKEERDDLRGSNCR
LSTIATATTNPAHPHRGSCSNLMRQHSTESQPERERDRSSLMGSTQRISL
YDAHKLSKVLGDLPPPPPSSVSPTPSASSSLHRRHKSPTQRMRECVTCAD
VFLEAMGNACTLKNNNSSRYGKLFDIEIDFKGDPMGVHITHYPYNGPYHW
RAKFSHLLPITIRS*

RE40416.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:02:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18892-PA 1281 GF18892-PA 1..435 1..442 2022 87.9 Plus
Dana\GF14089-PA 1014 GF14089-PA 3..147 1..142 274 34.5 Plus
Dana\GF24454-PA 1028 GF24454-PA 12..122 6..115 268 42.3 Plus
Dana\GF14995-PA 2167 GF14995-PA 64..176 6..118 256 40.7 Plus
Dana\GF15868-PA 2121 GF15868-PA 70..179 9..118 246 39.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:02:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12368-PA 1288 GG12368-PA 1..442 1..442 2374 98.6 Plus
Dere\GG10379-PA 1011 GG10379-PA 3..147 1..142 276 34.5 Plus
Dere\GG14781-PA 1052 GG14781-PA 38..148 6..115 276 44.1 Plus
Dere\GG24226-PA 2167 GG24226-PA 64..176 6..118 253 40.7 Plus
Dere\GG10487-PA 2122 GG10487-PA 71..180 9..118 252 40 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:02:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19090-PA 1294 GH19090-PA 1..448 1..442 1642 77.2 Plus
Dgri\GH10476-PA 1011 GH10476-PA 3..147 1..142 273 33.8 Plus
Dgri\GH15215-PA 1027 GH15215-PA 12..123 6..116 259 41.1 Plus
Dgri\GH10819-PA 2167 GH10819-PA 64..176 6..118 253 40.7 Plus
Dgri\GH11707-PA 2137 GH11707-PA 70..179 9..118 251 40.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:23
Subject Length Description Subject Range Query Range Score Percent Strand
Myo95E-PG 464 CG5501-PG 1..464 1..464 2483 100 Plus
Myo95E-PF 464 CG5501-PF 1..464 1..464 2483 100 Plus
Myo95E-PE 1288 CG5501-PE 1..442 1..442 2355 100 Plus
Myo95E-PJ 1258 CG5501-PJ 1..440 1..440 2328 99.5 Plus
Myo95E-PB 1258 CG5501-PB 1..440 1..440 2328 99.5 Plus
Myo95E-PD 1278 CG5501-PD 1..440 1..440 2328 99.5 Plus
Myo31DF-PC 1011 CG7438-PC 3..147 1..142 271 34.5 Plus
Myo31DF-PB 1011 CG7438-PB 3..147 1..142 271 34.5 Plus
Myo31DF-PA 1011 CG7438-PA 3..147 1..142 271 34.5 Plus
Myo61F-PB 1026 CG9155-PB 12..122 6..115 271 44.1 Plus
Myo61F-PC 1026 CG9155-PC 12..122 6..115 271 44.1 Plus
Myo61F-PA 1035 CG9155-PA 21..131 6..115 271 44.1 Plus
Myo61F-PD 1052 CG9155-PD 38..148 6..115 271 44.1 Plus
ck-PD 2167 CG7595-PD 64..179 6..121 245 39.7 Plus
ck-PC 2167 CG7595-PC 64..179 6..121 245 39.7 Plus
ck-PB 2167 CG7595-PB 64..179 6..121 245 39.7 Plus
ck-PA 2167 CG7595-PA 64..179 6..121 245 39.7 Plus
Myo28B1-PD 1033 CG6976-PD 70..182 9..121 244 38.9 Plus
Myo28B1-PC 1034 CG6976-PC 71..183 9..121 244 38.9 Plus
Myo28B1-PA 2121 CG6976-PA 70..182 9..121 244 38.9 Plus
Myo28B1-PB 2122 CG6976-PB 71..183 9..121 244 38.9 Plus
jar-PI 1073 CG5695-PI 61..173 9..120 222 34.5 Plus
jar-PN 1238 CG5695-PN 61..173 9..120 222 34.5 Plus
jar-PM 1253 CG5695-PM 61..173 9..120 222 34.5 Plus
jar-PK 1253 CG5695-PK 61..173 9..120 222 34.5 Plus
jar-PJ 1253 CG5695-PJ 61..173 9..120 222 34.5 Plus
jar-PG 1253 CG5695-PG 61..173 9..120 222 34.5 Plus
jar-PB 1253 CG5695-PB 61..173 9..120 222 34.5 Plus
jar-PL 1268 CG5695-PL 61..173 9..120 222 34.5 Plus
jar-PH 1268 CG5695-PH 61..173 9..120 222 34.5 Plus
zip-PH 1964 CG15792-PH 90..199 9..118 209 38.2 Plus
zip-PG 1971 CG15792-PG 90..199 9..118 209 38.2 Plus
zip-PE 1971 CG15792-PE 90..199 9..118 209 38.2 Plus
zip-PC 1971 CG15792-PC 90..199 9..118 209 38.2 Plus
zip-PF 1979 CG15792-PF 90..199 9..118 209 38.2 Plus
zip-PB 2011 CG15792-PB 90..199 9..118 209 38.2 Plus
zip-PD 2016 CG15792-PD 135..244 9..118 209 38.2 Plus
zip-PI 2024 CG15792-PI 135..244 9..118 209 38.2 Plus
zip-PA 2056 CG15792-PA 135..244 9..118 209 38.2 Plus
Myo81F-PB 2082 CG45784-PB 6..121 3..118 196 33.6 Plus
Myo10A-PF 3054 CG43657-PF 65..175 6..118 187 33.3 Plus
Myo10A-PC 3054 CG43657-PC 65..175 6..118 187 33.3 Plus
Myo10A-PD 3145 CG43657-PD 156..266 6..118 187 33.3 Plus
Mhc-PL 1936 CG17927-PL 94..199 13..118 185 35.8 Plus
Mhc-PM 1936 CG17927-PM 94..199 13..118 185 35.8 Plus
Mhc-PK 1936 CG17927-PK 94..199 13..118 185 35.8 Plus
Mhc-PU 1949 CG17927-PU 94..199 13..118 185 35.8 Plus
Mhc-PN 1949 CG17927-PN 94..199 13..118 185 35.8 Plus
Mhc-PP 1949 CG17927-PP 94..199 13..118 185 35.8 Plus
Mhc-PH 1962 CG17927-PH 94..199 13..118 185 35.8 Plus
Mhc-PT 1962 CG17927-PT 94..199 13..118 185 35.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:02:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23427-PA 1292 GI23427-PA 1..446 1..442 1832 79.7 Plus
Dmoj\GI15949-PA 1010 GI15949-PA 3..147 1..142 273 34.5 Plus
Dmoj\GI13054-PA 1036 GI13054-PA 21..132 6..116 262 41.1 Plus
Dmoj\GI16092-PA 1963 GI16092-PA 70..179 9..118 257 40.9 Plus
Dmoj\GI17331-PA 2167 GI17331-PA 64..176 6..118 253 40.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:02:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24138-PA 1307 GL24138-PA 1..461 1..442 1902 82.2 Plus
Dper\GL19529-PA 1010 GL19529-PA 3..147 1..142 281 35.2 Plus
Dper\GL16178-PA 717 GL16178-PA 12..123 6..116 267 41.1 Plus
Dper\GL19278-PA 2140 GL19278-PA 70..179 9..118 255 40 Plus
Dper\GL25728-PA 2168 GL25728-PA 64..176 6..118 252 40.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:02:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26514-PD 483 GA26514-PD 1..481 1..462 1968 81.4 Plus
Dpse\GA26514-PA 1307 GA26514-PA 1..461 1..442 1903 82.2 Plus
Dpse\GA26514-PC 1277 GA26514-PC 1..459 1..440 1878 81.6 Plus
Dpse\GA26514-PB 1297 GA26514-PB 1..459 1..440 1877 81.6 Plus
Dpse\GA25997-PA 1010 GA25997-PA 3..147 1..142 281 35.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:02:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23507-PA 1178 GM23507-PA 144..340 242..440 1037 97.5 Plus
Dsec\GM23507-PA 1178 GM23507-PA 1..143 1..143 780 100 Plus
Dsec\GM14400-PA 1052 GM14400-PA 38..148 6..115 276 44.1 Plus
Dsec\GM11630-PA 889 GM11630-PA 3..147 1..142 275 34.5 Plus
Dsec\GM14555-PA 2167 GM14555-PA 64..176 6..118 253 40.7 Plus
Dsec\GM16510-PA 2137 GM16510-PA 70..179 9..118 249 40 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:02:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18317-PA 1288 GD18317-PA 1..442 1..442 2396 100 Plus
Dsim\GD22248-PA 1011 GD22248-PA 3..147 1..142 276 34.5 Plus
Dsim\GD13609-PA 176 GD13609-PA 38..142 6..109 268 45.7 Plus
Dsim\GD23479-PA 1620 GD23479-PA 70..179 9..118 253 40 Plus
Dsim\GD21973-PA 2167 GD21973-PA 64..176 6..118 253 40.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:02:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14530-PA 1296 GJ14530-PA 1..450 1..442 1721 76.9 Plus
Dvir\GJ10423-PA 1013 GJ10423-PA 3..147 1..142 272 33.8 Plus
Dvir\GJ12149-PA 1027 GJ12149-PA 12..123 6..116 267 42 Plus
Dvir\GJ16193-PA 2126 GJ16193-PA 70..179 9..118 257 40.9 Plus
Dvir\GJ23024-PA 1265 GJ23024-PA 79..191 9..120 215 33.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:02:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13308-PA 1293 GK13308-PA 1..447 1..442 1873 83.3 Plus
Dwil\GK21236-PA 1011 GK21236-PA 3..147 1..142 273 33.8 Plus
Dwil\GK13346-PA 1027 GK13346-PA 12..122 6..115 260 40.5 Plus
Dwil\GK18067-PA 2167 GK18067-PA 64..176 6..118 251 39.8 Plus
Dwil\GK23726-PA 2123 GK23726-PA 70..179 9..118 249 40 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:02:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10823-PA 1288 GE10823-PA 1..442 1..442 2353 98 Plus
Dyak\GE13561-PA 1011 GE13561-PA 3..147 1..142 277 34.5 Plus
Dyak\GE21145-PA 1052 GE21145-PA 38..148 6..115 274 43.2 Plus
Dyak\GE14590-PA 2123 GE14590-PA 71..180 9..118 253 40 Plus
Dyak\GE19418-PA 2167 GE19418-PA 64..176 6..118 253 40.7 Plus

RE40416.hyp Sequence

Translation from 1411 to 3943

> RE40416.hyp
MESYLISKLILREIQWECTLPITRITDPIIGERNFHIFYQLLLGADLQLL
KSLKLYRNVEKYELLRNTTAMEEDRMNFHYTKRSLDVLGLSCEESNSIFR
VIAVVLKLGNFIFVPITNIDGTEGCQVSNVYEVQETAQLLNMEAQILINC
LTRANSTNSAQEDVGCEMDARQAATNRNTLCRTLYSRLFTWLVNKINESL
KSTQREKNLALLDFYGFEALDHNSFEQFAINYSAEKIHQNFVFHVLRSEQ
ELYIREGLEWSRIDYFDNESICELIDKPSYGILSLINEPHLNSNDALLLR
VQQCCAGHPNFMTTGSNSMCFQIRHYASVVNYSIHRFLEKNSDMLPKYIS
AAFYQSKLSLVQSLFPEGNPRRQVTKKPSTLSSNIRTQLQTLLAIVKHRR
SHYVFCIKPNEGKQPHQFDMALVQHQVRYMSLMPLVHLCRTGHCYHLLHV
KFFHRYKLLNSLTWPHFHGGSQVEGIALIIRNLPLPSAEFTIGTKNVFVR
SPRTVYELEQFRRLRISELAVLIQTMFRMYHARKRFQRMRHSQMIISSAW
RTWRAREEYRSLKYKRQVRWAIDIIGRYYRQWKIRQFLLTIPLRLPPNTL
SPLSTEWPVAPAFLADASRHLRSIYHRWKCYIYRNSFDQTARNRMREKVT
ASIIFKDRKASYGRSVGHPFVGDYVRLRHNQQWKKICAETNDQYVVFADI
INKIARSSGKFVPILLVLSTSSLLLLDQRTLQIKYRVPASEIYRMSLSPY
LDDIAVFHVKASEFGRKKGDFVFQTGHVIEIVTKMFLVIQNATGKPPEIH
ISTEFEANFGQQTVIFSFKYGGMSDLAQGPPKVTRKANRMEIIV*

RE40416.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:55:39
Subject Length Description Subject Range Query Range Score Percent Strand
Myo95E-PJ 1258 CG5501-PJ 437..1258 23..844 4290 100 Plus
Myo95E-PB 1258 CG5501-PB 437..1258 23..844 4290 100 Plus
Myo95E-PE 1288 CG5501-PE 447..1288 23..844 4259 97.6 Plus
Myo95E-PD 1278 CG5501-PD 437..1278 23..844 4259 97.6 Plus
Myo61F-PB 1026 CG9155-PB 190..1023 23..843 886 29.5 Plus