BDGP Sequence Production Resources |
Search the DGRC for RE40519
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 405 |
Well: | 19 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Fkbp14-RA |
Protein status: | RE40519.pep: gold |
Sequenced Size: | 1314 |
Gene | Date | Evidence |
---|---|---|
CG9847 | 2004-03-31 | Blastp of sequenced clone |
Fkbp13 | 2008-04-29 | Release 5.5 accounting |
Fkbp13 | 2008-08-15 | Release 5.9 accounting |
Fkbp13 | 2008-12-18 | 5.12 accounting |
1314 bp (1314 high quality bases) assembled on 2004-03-31
GenBank Submission: BT012468
> RE40519.complete AGTTAAACTTGAGCAATTGCTTGAATAGGTTGTGTGTCCTTCGTGTTCCA TATATTTTTCGTTTTTGTTACATTTTTCAAAACGATTATTAGCTTAATAA AAAATGAATAACTTTTTGGAATACATTTCGGTATTACATTGTTCCTCCAT GTCGAAATCCAATCTCGTTATCTCGTGCCTTCTGCTGGTGGCCATCAGCA ACAGCCTGGTCCGGGCTCAGGATCTGAAAGTGGAGGTGATCAGCACGCCG GAGGTGTGCGAACAAAAGTCCAAGAACGGCGATTCCCTCACCATGCACTA CACTGGAACTCTGCAGGCCGATGGCAAGAAATTCGACTCGAGCTTCGACC GCGACCAGCCCTTCACATTCCAATTGGGCGCCGGCCAGGTGATTAAGGGT TGGGATCAGGGTCTGCTCAACATGTGCGTGGGTGAGAAGCGCAAGCTGAC CATTCCTCCCCAGCTGGGCTATGGTGACCAGGGTGCCGGCAACGTGATAC CGCCCAAGGCCACCCTCCTCTTCGATGTGGAGCTGATCAACATCGGCAAT GCCCCGCCCACCACCAATGTGTTCAAGGAGATCGACGATAATGCCGACAA GCAGCTGAGTCGCGAAGAGGTCAGCGAGTATCTAAAGAAGCAGATGACCG CCGTGGAGGGACAGGATTCCGAGGAGCTGAAGAACATGCTGGCTGAGAAC GACAAGCTGGTGGAGGAGATCTTTCAGCACGAGGATAAGGATAAGAACGG TTTCATCTCGCACGATGAGTTCTCGGGACCCAAACACGACGAGCTGTAGT GCTCAATAATGGGGGTTCTTGGTTTGCCGTCAACATCGAAGGGACACGAG TGCTTAAGTTATATAAAACCCAAATATATACACAAAAATAGAACATATAC AACAGATGAGGCACGAGCCGAGCAATAAATCGAGTGCAACCAAATGCTTC CCGATGTCATTTTGTATATAGCATACATATCAGCATCAGCATCAGCATCT GCATCTGCATCTAAACACCAACACATTAGAGGAGTGCATTAGTAGTTTGT GTGTCTGTAACCCCGGTACTAGACGTAGTTTAAATTATGTACAATCTGAG AGAGAATGAACATCATTTTTATATACATTTATAGGTTGTTATATATTTTG TGTCGGCTGCGGGTGGTGACGATTTTTAGACCCATCGTAAAGATAATATC GTATAATATCGTATATTGTAAATCAGACACACTCTCAAGACGAAGTCAAT TGAAACACTTTAAATTGAATAAAGAATTGCTATCAATAATTTAACAAGAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fkbp13-RC | 1365 | Fkbp13-RC | 1..1299 | 1..1299 | 6495 | 100 | Plus |
Fkbp13-RA | 1402 | Fkbp13-RA | 184..1336 | 147..1299 | 5765 | 100 | Plus |
Fkbp13.a | 1310 | Fkbp13.a | 630..1309 | 620..1299 | 3400 | 100 | Plus |
Fkbp13.a | 1310 | Fkbp13.a | 145..619 | 147..621 | 2375 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17373680..17374360 | 1298..618 | 3330 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 17381629..17381824 | 342..147 | 950 | 99 | Minus |
chr2R | 21145070 | chr2R | 17374530..17374720 | 621..431 | 940 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 17384269..17384414 | 146..1 | 730 | 100 | Minus |
chr2R | 21145070 | chr2R | 17374784..17374876 | 433..341 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21487166..21487847 | 1299..618 | 3410 | 100 | Minus |
2R | 25286936 | 2R | 21495131..21495326 | 342..147 | 980 | 100 | Minus |
2R | 25286936 | 2R | 21488017..21488207 | 621..431 | 955 | 100 | Minus |
2R | 25286936 | 2R | 21497781..21497926 | 146..1 | 730 | 100 | Minus |
2R | 25286936 | 2R | 21488271..21488363 | 433..341 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21488365..21489046 | 1299..618 | 3410 | 100 | Minus |
2R | 25260384 | 2R | 21496330..21496525 | 342..147 | 980 | 100 | Minus |
2R | 25260384 | 2R | 21489216..21489406 | 621..431 | 955 | 100 | Minus |
2R | 25260384 | 2R | 21498980..21499125 | 146..1 | 730 | 100 | Minus |
2R | 25260384 | 2R | 21489470..21489562 | 433..341 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2359..2410 | 970..1023 | 112 | 70.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17374786..17374874 | 343..431 | 100 | <- | Minus |
chr2R | 17381629..17381824 | 147..342 | 98 | <- | Minus |
chr2R | 17384269..17384414 | 1..146 | 100 | Minus | |
chr2R | 17373680..17374358 | 620..1298 | 99 | <- | Minus |
chr2R | 17374532..17374719 | 432..619 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fkbp13-RC | 1..651 | 149..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fkbp13-RC | 1..651 | 149..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fkbp14-RC | 1..651 | 149..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fkbp13-RB | 1..696 | 104..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fkbp14-RC | 1..651 | 149..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fkbp13-RC | 1..1298 | 1..1298 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fkbp13-RC | 1..1298 | 1..1298 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fkbp14-RC | 4..1301 | 1..1298 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fkbp13-RB | 1..1292 | 1..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fkbp14-RC | 4..1301 | 1..1298 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21487167..21487845 | 620..1298 | 100 | <- | Minus |
2R | 21488019..21488206 | 432..619 | 100 | <- | Minus |
2R | 21488273..21488361 | 343..431 | 100 | <- | Minus |
2R | 21495131..21495326 | 147..342 | 100 | <- | Minus |
2R | 21497781..21497926 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21487167..21487845 | 620..1298 | 100 | <- | Minus |
2R | 21488019..21488206 | 432..619 | 100 | <- | Minus |
2R | 21488273..21488361 | 343..431 | 100 | <- | Minus |
2R | 21495131..21495326 | 147..342 | 100 | <- | Minus |
2R | 21497781..21497926 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21487167..21487845 | 620..1298 | 100 | <- | Minus |
2R | 21488019..21488206 | 432..619 | 100 | <- | Minus |
2R | 21488273..21488361 | 343..431 | 100 | <- | Minus |
2R | 21495131..21495326 | 147..342 | 100 | <- | Minus |
2R | 21497781..21497926 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17374672..17375350 | 620..1298 | 100 | <- | Minus |
arm_2R | 17375524..17375711 | 432..619 | 100 | <- | Minus |
arm_2R | 17375778..17375866 | 343..431 | 100 | <- | Minus |
arm_2R | 17382636..17382831 | 147..342 | 100 | <- | Minus |
arm_2R | 17385286..17385431 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21488366..21489044 | 620..1298 | 100 | <- | Minus |
2R | 21489218..21489405 | 432..619 | 100 | <- | Minus |
2R | 21489472..21489560 | 343..431 | 100 | <- | Minus |
2R | 21496330..21496525 | 147..342 | 100 | <- | Minus |
2R | 21498980..21499125 | 1..146 | 100 | Minus |
Translation from 103 to 798
> RE40519.pep MNNFLEYISVLHCSSMSKSNLVISCLLLVAISNSLVRAQDLKVEVISTPE VCEQKSKNGDSLTMHYTGTLQADGKKFDSSFDRDQPFTFQLGAGQVIKGW DQGLLNMCVGEKRKLTIPPQLGYGDQGAGNVIPPKATLLFDVELINIGNA PPTTNVFKEIDDNADKQLSREEVSEYLKKQMTAVEGQDSEELKNMLAEND KLVEEIFQHEDKDKNGFISHDEFSGPKHDEL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12094-PA | 214 | GF12094-PA | 1..214 | 16..231 | 1068 | 94 | Plus |
Dana\GF18389-PA | 137 | GF18389-PA | 3..128 | 23..147 | 305 | 54.3 | Plus |
Dana\GF11585-PA | 108 | GF11585-PA | 18..107 | 57..147 | 269 | 53.8 | Plus |
Dana\GF14673-PA | 440 | GF14673-PA | 32..168 | 58..191 | 234 | 38.1 | Plus |
Dana\GF23032-PA | 358 | GF23032-PA | 265..357 | 54..147 | 210 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20775-PA | 231 | GG20775-PA | 1..231 | 1..231 | 1163 | 95.2 | Plus |
Dere\GG18343-PA | 138 | GG18343-PA | 1..129 | 16..147 | 291 | 50.4 | Plus |
Dere\GG21957-PA | 108 | GG21957-PA | 18..107 | 57..147 | 269 | 53.8 | Plus |
Dere\GG20671-PA | 355 | GG20671-PA | 262..351 | 54..144 | 234 | 48.4 | Plus |
Dere\GG10059-PA | 439 | GG10059-PA | 31..117 | 58..145 | 220 | 46.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20056-PA | 212 | GH20056-PA | 4..212 | 20..231 | 984 | 89.2 | Plus |
Dgri\GH18265-PA | 138 | GH18265-PA | 7..130 | 21..147 | 308 | 55.5 | Plus |
Dgri\GH23096-PA | 108 | GH23096-PA | 1..107 | 41..147 | 270 | 48.1 | Plus |
Dgri\GH11297-PA | 441 | GH11297-PA | 32..118 | 58..145 | 219 | 46.6 | Plus |
Dgri\GH21813-PA | 365 | GH21813-PA | 261..361 | 36..144 | 212 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fkbp14-PF | 216 | CG9847-PF | 1..216 | 16..231 | 1117 | 100 | Plus |
Fkbp14-PE | 216 | CG9847-PE | 1..216 | 16..231 | 1117 | 100 | Plus |
Fkbp14-PC | 216 | CG9847-PC | 1..216 | 16..231 | 1117 | 100 | Plus |
Fkbp14-PA | 216 | CG9847-PA | 1..216 | 16..231 | 1117 | 100 | Plus |
Fkbp14-PD | 220 | CG9847-PD | 1..220 | 16..231 | 1102 | 98.2 | Plus |
CG14715-PA | 138 | CG14715-PA | 8..129 | 26..147 | 324 | 52.8 | Plus |
Fkbp12-PA | 108 | CG11001-PA | 18..107 | 57..147 | 269 | 53.8 | Plus |
Fkbp39-PA | 357 | CG6226-PA | 264..353 | 54..144 | 220 | 47.3 | Plus |
Fkbp59-PB | 439 | CG4535-PB | 31..117 | 58..145 | 211 | 46.6 | Plus |
Fkbp59-PA | 439 | CG4535-PA | 31..117 | 58..145 | 211 | 46.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20465-PA | 424 | GI20465-PA | 205..424 | 8..231 | 1007 | 85.3 | Plus |
Dmoj\GI24072-PA | 139 | GI24072-PA | 5..130 | 24..147 | 303 | 54.3 | Plus |
Dmoj\GI18922-PA | 108 | GI18922-PA | 18..107 | 57..147 | 266 | 52.7 | Plus |
Dmoj\GI21928-PA | 370 | GI21928-PA | 266..366 | 36..144 | 229 | 43.1 | Plus |
Dmoj\GI17716-PA | 441 | GI17716-PA | 33..118 | 59..145 | 217 | 46 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17491-PA | 214 | GL17491-PA | 19..214 | 36..231 | 1025 | 96.9 | Plus |
Dper\GL22120-PA | 139 | GL22120-PA | 3..130 | 23..147 | 292 | 51.9 | Plus |
Dper\GL17641-PA | 108 | GL17641-PA | 18..107 | 57..147 | 264 | 52.7 | Plus |
Dper\GL24296-PA | 342 | GL24296-PA | 251..341 | 56..147 | 231 | 46.7 | Plus |
Dper\GL18937-PA | 440 | GL18937-PA | 32..118 | 58..145 | 222 | 46.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22070-PA | 214 | GA22070-PA | 19..214 | 36..231 | 1025 | 96.9 | Plus |
Dpse\GA13197-PA | 139 | GA13197-PA | 3..130 | 23..147 | 292 | 51.9 | Plus |
Dpse\GA10702-PA | 108 | GA10702-PA | 18..107 | 57..147 | 264 | 52.7 | Plus |
Dpse\GA26561-PA | 341 | GA26561-PA | 250..340 | 56..147 | 231 | 46.7 | Plus |
Dpse\GA18239-PA | 440 | GA18239-PA | 32..118 | 58..145 | 222 | 46.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15719-PA | 231 | GM15719-PA | 1..231 | 1..231 | 1199 | 97.8 | Plus |
Dsec\GM23968-PA | 138 | GM23968-PA | 6..129 | 26..147 | 294 | 54.4 | Plus |
Dsec\GM21945-PA | 108 | GM21945-PA | 18..107 | 57..147 | 269 | 53.8 | Plus |
Dsec\GM25784-PA | 349 | GM25784-PA | 256..345 | 54..144 | 231 | 47.3 | Plus |
Dsec\GM17712-PA | 439 | GM17712-PA | 31..117 | 58..145 | 220 | 46.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25197-PA | 231 | GD25197-PA | 1..231 | 1..231 | 1205 | 98.3 | Plus |
Dsim\GD18774-PA | 138 | GD18774-PA | 1..129 | 16..147 | 297 | 51.1 | Plus |
Dsim\GD20361-PA | 348 | GD20361-PA | 255..344 | 54..144 | 229 | 47.3 | Plus |
Dsim\GD23632-PA | 402 | GD23632-PA | 31..117 | 58..145 | 217 | 46.6 | Plus |
Dsim\GD11442-PA | 137 | GD11442-PA | 18..86 | 57..126 | 207 | 52.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22316-PA | 212 | GJ22316-PA | 4..212 | 20..231 | 991 | 88.7 | Plus |
Dvir\GJ10892-PA | 138 | GJ10892-PA | 7..130 | 21..147 | 300 | 54.7 | Plus |
Dvir\GJ19778-PA | 108 | GJ19778-PA | 18..107 | 57..147 | 270 | 53.8 | Plus |
Dvir\GJ17544-PA | 441 | GJ17544-PA | 32..118 | 58..145 | 217 | 45.5 | Plus |
Dvir\GJ14288-PA | 359 | GJ14288-PA | 268..355 | 56..144 | 195 | 47.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20742-PA | 211 | GK20742-PA | 1..211 | 16..231 | 1043 | 92.1 | Plus |
Dwil\GK22382-PA | 139 | GK22382-PA | 7..131 | 21..147 | 287 | 51.6 | Plus |
Dwil\GK20673-PA | 108 | GK20673-PA | 1..107 | 41..147 | 267 | 47.2 | Plus |
Dwil\GK23813-PA | 440 | GK23813-PA | 32..118 | 58..145 | 227 | 46.6 | Plus |
Dwil\GK11959-PA | 358 | GK11959-PA | 265..357 | 54..147 | 208 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Fkbp13-PA | 231 | GE13712-PA | 1..231 | 1..231 | 1170 | 95.7 | Plus |
Dyak\GE24193-PA | 138 | GE24193-PA | 3..129 | 23..147 | 295 | 53.1 | Plus |
Dyak\FK506-bp2-PA | 108 | GE12036-PA | 18..107 | 57..147 | 269 | 53.8 | Plus |
Dyak\GE26389-PA | 353 | GE26389-PA | 260..349 | 54..144 | 231 | 47.3 | Plus |
Dyak\FKBP59-PA | 439 | GE18873-PA | 31..117 | 58..145 | 221 | 46.6 | Plus |
Translation from 103 to 798
> RE40519.hyp MNNFLEYISVLHCSSMSKSNLVISCLLLVAISNSLVRAQDLKVEVISTPE VCEQKSKNGDSLTMHYTGTLQADGKKFDSSFDRDQPFTFQLGAGQVIKGW DQGLLNMCVGEKRKLTIPPQLGYGDQGAGNVIPPKATLLFDVELINIGNA PPTTNVFKEIDDNADKQLSREEVSEYLKKQMTAVEGQDSEELKNMLAEND KLVEEIFQHEDKDKNGFISHDEFSGPKHDEL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fkbp14-PF | 216 | CG9847-PF | 1..216 | 16..231 | 1117 | 100 | Plus |
Fkbp14-PE | 216 | CG9847-PE | 1..216 | 16..231 | 1117 | 100 | Plus |
Fkbp14-PC | 216 | CG9847-PC | 1..216 | 16..231 | 1117 | 100 | Plus |
Fkbp14-PA | 216 | CG9847-PA | 1..216 | 16..231 | 1117 | 100 | Plus |
Fkbp14-PD | 220 | CG9847-PD | 1..220 | 16..231 | 1102 | 98.2 | Plus |