BDGP Sequence Production Resources |
Search the DGRC for RE40745
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 407 |
Well: | 45 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Drep-1-RA |
Protein status: | RE40745.pep: gold |
Preliminary Size: | 2137 |
Sequenced Size: | 2167 |
Gene | Date | Evidence |
---|---|---|
CG8357 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8357 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8357 | 2003-08-12 | Blastp of sequenced clone |
Rep1 | 2008-04-29 | Release 5.5 accounting |
Rep1 | 2008-08-15 | Release 5.9 accounting |
Rep1 | 2008-12-18 | 5.12 accounting |
2167 bp (2167 high quality bases) assembled on 2003-08-12
GenBank Submission: BT010245
> RE40745.complete GGCTCATTTCAAAACCGGTGCTCATCGCAACGAAAGCTCCGCTGCGGAGC CGAGAAAATATTGTTAATTCCCATTTGAAGTGCAGCTTGTGGAAGGAAAT TCCAAGTTTGTTTGTTCGGACGCCGAGTGCAAGTGCAAGAAGCAAGCGAA AAGTAATCAAATCTATAGAAAAGTCATTTAATGTGGAGCAATTAAGCCTG GAAATAAAGTGCATAGTGAATAAGTAATTTAGTTGGAGCAAACAAAGCCA TGGAGACTGCAGCGAACTCGGGCGACTCCAAAAAGCCTTTCAAAGTCAAG GACGTAACACGCAACATTAAGAAGGCTGTCTGCGCCTCCAGTCTGGAGGA GATCCGCAGCAAGGTGGCGGAGAAGTTCGAGAAGTGCGACCACCTGCCCA CCATCCACCTGGACTCCGACGGCACGGAGATCGATGATGAGGAGTACTTT CGCACCCTCGACGAGAATACGGAACTGGTGGCCGTCTTTCCCGGAGAACA TTGGATCGATCCCACTCACTACGTGACGATAACCACTCCACATGGCAACG AGGCAGGAACTGGAAACGGAGAGCTGAACGGAGGAGGCGAGGGCGACACC ACCGATGCCAACAACTCGGAGTCGGCTCGCATCCGCCAGTTGGTGGGCCA GCTGCAGAACAACCTCTGCAACGTGTCCGTGATGAACGATGCCGATCTGG ACTCACTCTCCAACATGGATCCCAACTCGTTGGTGGACATCACGGGAAAG GAGTTTATGGAGCAGCTCAAGGATGCGGGAAGGCCATTGTGTGCCAAGCG GAATGCCGAGGATCGTTTAAATCTGCTGAAGCTATTGAAAGCTGGTGCCA TTTTCTGCTCGGAACGTTATCCCGAGGATGCGGAGGCCATTGACCGGGAG ATTGGACGGCAGTTGAACGAGGCGGAGAGTGGACAGATGAGCACCACAAC GACGAGCAACACCCGCACCATCGAGGTGGTGCAGTGCGACAATCAAAACA CGACGATAACAATTACGGTGGGCGAGGCCACCACCACTTGCGCCACAGCC AGTGGAGCGATGGGATCCTCCGCTGCCGAAGCGGCTGCCAATGAGGCCAA TGCCAATCCAAATAGAAATCCAAATGCCAACGGCGACATCTGACTGCCCA TTTTGGGCAGTCTTAGGTAAAGTCTGCCGGCGGAAAACTAACGCAACTGG GTGCGCCAATCAAAATCAAGAGCCAAAAGGATATACCGAAGACATCAGTC CTGCAACATTGGGTTAACATAAATCGTATTTGTAGCATGTAATTAGGCAC TGCGAAATCAGCAAAAACGAAACGGAGACGAAATCAAGTCATTGAAAATG CTTCATAGTATCTAAGAGCAAATGAAAGTTAACGAACAATACACGTACTA GATTTAAACACCGGGTCACGAGGCTCAAGAGAACAAGAGGCCCGCGCAGA TTTGAAAAGTCTTTTAGCAATCACAGTCAGCGGAATCGTATTTAACCGCA TATACACGAGTCACACCAAGCCGTACTAGATGAATAATAATCAAAGGTTA GCGAAATAAGTATTATACTTGAGGTAGAATCCCACAACCAGAGCGAACCC CAATTGGATGGAGTTGTCCCAGGAAACTGTTGATTTGCTTACCGTGTAAA TTGTGTTACGAATAGTAGGTAGAGTGGAAACGCACATCAAATATTGTTTT TAGACCAATGCCATTGTGAATGTCATTCGTTAAAGGCCAATTGAGACTGA CTGAATTTATGTGTAATAGGTTTTTTCGTGGTTTGAGCGGTTCGGGAAAG ATCGGATGGAAGCCTCCAGCGCTGCTGCCCTGTCCTCCCAGAATCCCCGT CTTCCCGCCCCCGAATCCATAGCCAAATGAATTTAAGCGACAGCGCAAAC ATTGTTAGCTAATTAAACAATAATGGAACACAATAACGCAAATTGCAATT GCCCAATCAAAGTTGGTAACTGTAACTGTCTACAATTCGAATAAGCAATA AGGGAAACCGTAAACGTAAACGAAATCTAAAACCGAATGCAAACAGTGAA CAATTATTAAATATAGTGAAAAGCATACAGTAAATGCAAGTGAAAACCCC GAGGCAAACTATATACACGAAACCAAGTAATAAATAAATGATTATTAAAC CAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Drep-1-RA | 2155 | Drep-1-RA | 4..2152 | 2..2150 | 10745 | 100 | Plus |
Drep-3.b | 1760 | Drep-3.b | 588..704 | 406..522 | 180 | 76.9 | Plus |
Drep-3-RA | 1822 | Drep-3-RA | 650..766 | 406..522 | 180 | 76.9 | Plus |
Drep-3.b | 1760 | Drep-3.b | 780..844 | 682..746 | 145 | 81.5 | Plus |
Drep-3-RA | 1822 | Drep-3-RA | 842..906 | 682..746 | 145 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 7936026..7937395 | 781..2150 | 6775 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 7931837..7932131 | 2..296 | 1475 | 100 | Plus |
chr2R | 21145070 | chr2R | 7935697..7935969 | 511..783 | 1335 | 99.3 | Plus |
chr2R | 21145070 | chr2R | 7935198..7935413 | 295..510 | 1080 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12048803..12050176 | 781..2154 | 6855 | 99.9 | Plus |
2R | 25286936 | 2R | 12044616..12044910 | 2..296 | 1475 | 100 | Plus |
2R | 25286936 | 2R | 12048475..12048747 | 511..783 | 1365 | 100 | Plus |
2R | 25286936 | 2R | 12047976..12048191 | 295..510 | 1080 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12050002..12051375 | 781..2154 | 6855 | 99.9 | Plus |
2R | 25260384 | 2R | 12045815..12046109 | 2..296 | 1475 | 100 | Plus |
2R | 25260384 | 2R | 12049674..12049946 | 511..783 | 1365 | 100 | Plus |
2R | 25260384 | 2R | 12049175..12049390 | 295..510 | 1080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7931835..7932129 | 1..294 | 99 | -> | Plus |
chr2R | 7935198..7935413 | 295..510 | 100 | -> | Plus |
chr2R | 7935697..7935968 | 511..782 | 99 | -> | Plus |
chr2R | 7936028..7937395 | 783..2151 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rep1-RA | 1..894 | 250..1143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Drep-1-RA | 1..894 | 250..1143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Drep-1-RB | 1..921 | 250..1170 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rep1-RA | 1..894 | 250..1143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Drep-1-RB | 1..921 | 250..1170 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rep1-RA | 1..2151 | 1..2151 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Drep-1-RA | 1..2151 | 1..2151 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Drep-1-RA | 3..2153 | 1..2150 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rep1-RA | 1..2151 | 1..2151 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Drep-1-RA | 3..2153 | 1..2150 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12044614..12044908 | 1..294 | 99 | -> | Plus |
2R | 12047976..12048191 | 295..510 | 100 | -> | Plus |
2R | 12048475..12048746 | 511..782 | 100 | -> | Plus |
2R | 12048805..12050172 | 783..2151 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12044614..12044908 | 1..294 | 99 | -> | Plus |
2R | 12047976..12048191 | 295..510 | 100 | -> | Plus |
2R | 12048475..12048746 | 511..782 | 100 | -> | Plus |
2R | 12048805..12050172 | 783..2151 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12044614..12044908 | 1..294 | 99 | -> | Plus |
2R | 12047976..12048191 | 295..510 | 100 | -> | Plus |
2R | 12048475..12048746 | 511..782 | 100 | -> | Plus |
2R | 12048805..12050172 | 783..2151 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7932119..7932413 | 1..294 | 99 | -> | Plus |
arm_2R | 7935481..7935696 | 295..510 | 100 | -> | Plus |
arm_2R | 7935980..7936251 | 511..782 | 100 | -> | Plus |
arm_2R | 7936310..7937677 | 783..2151 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12045813..12046107 | 1..294 | 99 | -> | Plus |
2R | 12049175..12049390 | 295..510 | 100 | -> | Plus |
2R | 12049674..12049945 | 511..782 | 100 | -> | Plus |
2R | 12050004..12051371 | 783..2151 | 99 | Plus |
Translation from 249 to 1142
> RE40745.hyp METAANSGDSKKPFKVKDVTRNIKKAVCASSLEEIRSKVAEKFEKCDHLP TIHLDSDGTEIDDEEYFRTLDENTELVAVFPGEHWIDPTHYVTITTPHGN EAGTGNGELNGGGEGDTTDANNSESARIRQLVGQLQNNLCNVSVMNDADL DSLSNMDPNSLVDITGKEFMEQLKDAGRPLCAKRNAEDRLNLLKLLKAGA IFCSERYPEDAEAIDREIGRQLNEAESGQMSTTTTSNTRTIEVVQCDNQN TTITITVGEATTTCATASGAMGSSAAEAAANEANANPNRNPNANGDI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Drep-1-PA | 297 | CG8357-PA | 1..297 | 1..297 | 1538 | 100 | Plus |
Drep-1-PB | 306 | CG8357-PB | 1..297 | 1..297 | 1538 | 100 | Plus |
Drep-3-PA | 266 | CG8364-PA | 116..245 | 9..168 | 382 | 51.9 | Plus |
Drep-3-PB | 266 | CG8364-PB | 116..245 | 9..168 | 382 | 51.9 | Plus |
Translation from 249 to 1142
> RE40745.pep METAANSGDSKKPFKVKDVTRNIKKAVCASSLEEIRSKVAEKFEKCDHLP TIHLDSDGTEIDDEEYFRTLDENTELVAVFPGEHWIDPTHYVTITTPHGN EAGTGNGELNGGGEGDTTDANNSESARIRQLVGQLQNNLCNVSVMNDADL DSLSNMDPNSLVDITGKEFMEQLKDAGRPLCAKRNAEDRLNLLKLLKAGA IFCSERYPEDAEAIDREIGRQLNEAESGQMSTTTTSNTRTIEVVQCDNQN TTITITVGEATTTCATASGAMGSSAAEAAANEANANPNRNPNANGDI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12288-PA | 300 | GF12288-PA | 1..300 | 1..297 | 1199 | 85.5 | Plus |
Dana\GF12289-PA | 260 | GF12289-PA | 110..239 | 9..168 | 402 | 52.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20241-PA | 297 | GG20241-PA | 1..297 | 1..297 | 1554 | 98.3 | Plus |
Dere\GG20243-PA | 262 | GG20243-PA | 112..241 | 9..168 | 404 | 52.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20857-PA | 301 | GH20857-PA | 5..287 | 1..277 | 1199 | 82.2 | Plus |
Dgri\GH20858-PA | 243 | GH20858-PA | 93..223 | 9..169 | 418 | 54 | Plus |
Dgri\GH20347-PA | 534 | GH20347-PA | 52..134 | 4..85 | 150 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Drep1-PB | 306 | CG8357-PB | 1..297 | 1..297 | 1538 | 100 | Plus |
Drep1-PA | 297 | CG8357-PA | 1..297 | 1..297 | 1538 | 100 | Plus |
Drep3-PA | 266 | CG8364-PA | 116..245 | 9..168 | 382 | 51.9 | Plus |
Drep3-PB | 266 | CG8364-PB | 116..245 | 9..168 | 382 | 51.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20962-PA | 286 | GI20962-PA | 9..286 | 6..297 | 1252 | 83.3 | Plus |
Dmoj\GI20964-PA | 282 | GI20964-PA | 132..262 | 9..169 | 424 | 54 | Plus |
Dmoj\GI20016-PA | 539 | GI20016-PA | 63..139 | 10..85 | 149 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17094-PA | 311 | GL17094-PA | 5..287 | 1..273 | 1137 | 80.8 | Plus |
Dper\GL17096-PA | 261 | GL17096-PA | 111..240 | 9..168 | 394 | 51.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21015-PA | 310 | GA21015-PA | 5..286 | 1..273 | 1215 | 84.6 | Plus |
Dpse\GA21021-PA | 261 | GA21021-PA | 111..240 | 9..168 | 403 | 52.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21329-PA | 326 | GM21329-PA | 1..279 | 1..279 | 1305 | 92.1 | Plus |
Dsec\GM21330-PA | 258 | GM21330-PA | 108..237 | 9..168 | 401 | 52.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10836-PA | 297 | GD10836-PA | 1..297 | 1..297 | 1573 | 99.7 | Plus |
Dsim\GD10838-PA | 258 | GD10838-PA | 108..237 | 9..168 | 401 | 52.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20683-PA | 288 | GJ20683-PA | 5..288 | 3..297 | 1215 | 83.4 | Plus |
Dvir\GJ20685-PA | 252 | GJ20685-PA | 102..232 | 9..169 | 423 | 53.4 | Plus |