BDGP Sequence Production Resources |
Search the DGRC for RE40914
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 409 |
Well: | 14 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG7071-RA |
Protein status: | RE40914.pep: gold |
Preliminary Size: | 625 |
Sequenced Size: | 1505 |
Gene | Date | Evidence |
---|---|---|
CG7071 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7071 | 2002-02-26 | Blastp of sequenced clone |
CG7071 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7071 | 2008-04-29 | Release 5.5 accounting |
CG34131 | 2008-08-15 | Release 5.9 accounting |
CG7071 | 2008-08-15 | Release 5.9 accounting |
CG34131 | 2008-12-18 | 5.12 accounting |
CG7071 | 2008-12-18 | 5.12 accounting |
1505 bp (1505 high quality bases) assembled on 2002-02-26
GenBank Submission: AY084172
> RE40914.complete ATGGGACAGCTGTGGGCGAATGAAAATAATGATAAGCCAAGTCGGACGAG AGCTCTACAAGGTGCCGCTTCGCATTCTAGACCATCGCGTGTTCGTAAAC GGCGAGATCGAGGCCTTTCTTGAGAACTTCGAGGTGCGGCGCAACGACAG CGAAGTGGAGAAACTTTTCCAGGTCACAGAAACAGTGGGATCTCTGAAGT ACGATCTGTCCCGGTGCAGTGCAACCGGAAGGGGTAGCGGAGCCGAGAAC CTCGCCCAACTGGACACGGAAGTCAGCCATCTGCTGGACGGGGTCAACGC ACTCTTGGCGAAAGCGAAGGTGGAACGAACTGCTAGCACCCAGTTGCAGG AGGCGCGACTGGCACGTGAGCAACGCCGGGCGGAGGTCCTAACCAATTTG GAGCACGGCTATCGCCGAATCGAGAACTCATTCGAGGAGAAGGAGGAGGA AATCGCAGAGCTTTACTCAGATTTGCAACTAAAGCTTAACATTGCCAAGT AGAAACTATGCTGAAGTCAACGATTGTTGATCCGCGGGTGCGCCTTGTGC CGTCAAAGAAGCTGCTTGACTTTCTGGACGCCCAAAAGAAGCACTTAAAG GAGTTGCCCGAAAATGTGGCCAAGATTATGAAGCAAAGAGGCCACACACT GCCCACCTCTATTAGGATTATCAAGGATGCGGGCTTGGAGTACAAACGAC CAAAACTCAATTACGAGCTGTTGACAAAACTAACTGAAAACCTAGCCGAC AAACCAGAAGAACCTGCTAAGGATAAATCGGAACCAGATTCAGGGGTCAA GGATAGTGATGACGCAAAGTCAACAAGGGAGGTTAAACATTTCCTATACT TAACCGACCTGCACTGGCTCTCAAAAACACTGGCTGAACTGCGTCGTCAG GATCACTGCCAAGTCTTTCTGCATCAGCTAATTGAGTCCTGTGATCTGCT CCTGCCCGAAAACGAAATGAAGCCGCGCAATCCTGAGCTAGAAGCGCGCT GCCAACGTCTTCGCGCAGAGCAACAAAATCGGGATTACCTCAAAATGACC AAGAATGTGGATGCCGGCTTAAAACACTATCCAGAGGACACTATCAGCTA TCAGATTAAGAGCCTTAACAAGCAAATCATTGCCGTGGTGCAGTTCATCT TCTCCGTGGCCGCTGGCTTTACGTTCGGCTTTTTCGGCGTCAATTTGATG GTGGGCCCGCTGCCTTTCGGCTTTCGCATCTTGCTGGGCGTGATTGTAGC GCTCATCATAGCCCTGGCTGAGATGTACTTCCTGGCCAAGAAGCTGCACG AGTACGATGAGGTCTTGGACGCGCCCAAACGTAAGCCGCAGCCATCGACG CCGGCTAAGCGCACCCCGCCCGCCGAGGGAAGTCAAGTCCAGACATTGAA ACCCCATGTTGACTAGATAGATGATCTGCGAGTAAAAATCGTTCTTTGTC GTTGTATTATTTCGCTTTGCAATGTTAGGTTATATAAATAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 18186898..18187676 | 332..1110 | 3790 | 99.1 | Plus |
chr3R | 27901430 | chr3R | 18187735..18188118 | 1106..1489 | 1905 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 18186549..18186836 | 49..336 | 1410 | 99.3 | Plus |
chr3R | 27901430 | chr3R | 18186441..18186490 | 1..50 | 235 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 22363354..22364132 | 332..1110 | 3865 | 99.7 | Plus |
3R | 32079331 | 3R | 22364197..22364581 | 1106..1490 | 1925 | 100 | Plus |
3R | 32079331 | 3R | 22363005..22363292 | 49..336 | 1410 | 99.3 | Plus |
3R | 32079331 | 3R | 22362897..22362946 | 1..50 | 235 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 22104185..22104963 | 332..1110 | 3865 | 99.7 | Plus |
3R | 31820162 | 3R | 22105028..22105412 | 1106..1490 | 1925 | 100 | Plus |
3R | 31820162 | 3R | 22103836..22104123 | 49..336 | 1410 | 99.3 | Plus |
3R | 31820162 | 3R | 22103728..22103777 | 1..50 | 235 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18186441..18186490 | 1..50 | 98 | -> | Plus |
chr3R | 18186551..18186831 | 51..331 | 99 | -> | Plus |
chr3R | 18186898..18187671 | 332..1105 | 99 | -> | Plus |
chr3R | 18187735..18188118 | 1106..1489 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7071-RB | 1..909 | 508..1416 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7071-RB | 1..909 | 508..1416 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7071-RA | 1..909 | 508..1416 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7071-RB | 1..909 | 508..1416 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7071-RA | 1..909 | 508..1416 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34131-RA | 1..1489 | 1..1489 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
muted-RA | 1..1489 | 1..1489 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
muted-RA | 1..1489 | 1..1489 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34131-RA | 1..1489 | 1..1489 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Muted-RB | 278..1766 | 1..1489 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22362897..22362946 | 1..50 | 98 | -> | Plus |
3R | 22363007..22363287 | 51..331 | 99 | -> | Plus |
3R | 22363354..22364127 | 332..1105 | 99 | -> | Plus |
3R | 22364197..22364580 | 1106..1489 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22362897..22362946 | 1..50 | 98 | -> | Plus |
3R | 22363007..22363287 | 51..331 | 99 | -> | Plus |
3R | 22363354..22364127 | 332..1105 | 99 | -> | Plus |
3R | 22364197..22364580 | 1106..1489 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22362897..22362946 | 1..50 | 98 | -> | Plus |
3R | 22363007..22363287 | 51..331 | 99 | -> | Plus |
3R | 22363354..22364127 | 332..1105 | 99 | -> | Plus |
3R | 22364197..22364580 | 1106..1489 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18188619..18188668 | 1..50 | 98 | -> | Plus |
arm_3R | 18188729..18189009 | 51..331 | 99 | -> | Plus |
arm_3R | 18189076..18189849 | 332..1105 | 99 | -> | Plus |
arm_3R | 18189919..18190302 | 1106..1489 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22103838..22104118 | 51..331 | 99 | -> | Plus |
3R | 22104185..22104958 | 332..1105 | 99 | -> | Plus |
3R | 22105028..22105411 | 1106..1489 | 100 | Plus | |
3R | 22103728..22103777 | 1..50 | 98 | -> | Plus |
Translation from 507 to 1415
> RE40914.hyp MLKSTIVDPRVRLVPSKKLLDFLDAQKKHLKELPENVAKIMKQRGHTLPT SIRIIKDAGLEYKRPKLNYELLTKLTENLADKPEEPAKDKSEPDSGVKDS DDAKSTREVKHFLYLTDLHWLSKTLAELRRQDHCQVFLHQLIESCDLLLP ENEMKPRNPELEARCQRLRAEQQNRDYLKMTKNVDAGLKHYPEDTISYQI KSLNKQIIAVVQFIFSVAAGFTFGFFGVNLMVGPLPFGFRILLGVIVALI IALAEMYFLAKKLHEYDEVLDAPKRKPQPSTPAKRTPPAEGSQVQTLKPH VD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7071-PC | 302 | CG7071-PC | 1..302 | 1..302 | 1557 | 100 | Plus |
CG7071-PB | 302 | CG7071-PB | 1..302 | 1..302 | 1557 | 100 | Plus |
CG7071-PA | 302 | CG7071-PA | 1..302 | 1..302 | 1557 | 100 | Plus |
Translation from 507 to 1415
> RE40914.pep MLKSTIVDPRVRLVPSKKLLDFLDAQKKHLKELPENVAKIMKQRGHTLPT SIRIIKDAGLEYKRPKLNYELLTKLTENLADKPEEPAKDKSEPDSGVKDS DDAKSTREVKHFLYLTDLHWLSKTLAELRRQDHCQVFLHQLIESCDLLLP ENEMKPRNPELEARCQRLRAEQQNRDYLKMTKNVDAGLKHYPEDTISYQI KSLNKQIIAVVQFIFSVAAGFTFGFFGVNLMVGPLPFGFRILLGVIVALI IALAEMYFLAKKLHEYDEVLDAPKRKPQPSTPAKRTPPAEGSQVQTLKPH VD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18081-PA | 298 | GF18081-PA | 1..298 | 1..302 | 1089 | 70.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11121-PA | 441 | GG11121-PA | 137..441 | 1..302 | 1393 | 85.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21152-PA | 291 | GH21152-PA | 1..291 | 1..302 | 1032 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7071-PC | 302 | CG7071-PC | 1..302 | 1..302 | 1557 | 100 | Plus |
CG7071-PB | 302 | CG7071-PB | 1..302 | 1..302 | 1557 | 100 | Plus |
CG7071-PA | 302 | CG7071-PA | 1..302 | 1..302 | 1557 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10478-PA | 291 | GI10478-PA | 1..291 | 1..302 | 983 | 66.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23377-PA | 313 | GL23377-PA | 1..313 | 1..302 | 1080 | 67.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20078-PA | 313 | GA20078-PA | 1..313 | 1..302 | 1064 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26419-PA | 302 | GM26419-PA | 1..302 | 1..302 | 1543 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20938-PA | 302 | GD20938-PA | 1..302 | 1..302 | 1544 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23158-PA | 287 | GJ23158-PA | 1..287 | 1..302 | 1037 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12992-PA | 303 | GK12992-PA | 1..303 | 1..302 | 970 | 63 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10288-PA | 308 | GE10288-PA | 1..308 | 1..302 | 1389 | 85.7 | Plus |