Clone RE40937 Report

Search the DGRC for RE40937

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:409
Well:37
Vector:pFlc-1
Associated Gene/TranscriptDoc2-RA
Protein status:RE40937.pep: gold
Preliminary Size:1410
Sequenced Size:1955

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5187 2002-01-01 Sim4 clustering to Release 2
CG5187 2002-02-27 Blastp of sequenced clone
CG5187 2003-01-01 Sim4 clustering to Release 3
Doc2 2008-04-29 Release 5.5 accounting
Doc2 2008-08-15 Release 5.9 accounting
Doc2 2008-12-18 5.12 accounting

Clone Sequence Records

RE40937.complete Sequence

1955 bp (1955 high quality bases) assembled on 2002-02-27

GenBank Submission: AY084173

> RE40937.complete
AGTTGAAATGCGAACTTGGCGAGCTCAAGACACGACCGTCGCCCAAAGAT
ACAAAAAATTCTCTCAATATATTTGTGGTAAAATAATAACCCACGTACGC
GACACCGGGCCTAATCAAATTAACACCCACGCACATGAGAGACTTTTGTG
TGCCGTGATTTGCATAATTGACGCTAATCGGCGGCGTCTCGTGCTCGGCT
AAAAAGTAAACCCGGGCTCCAAAAAAATAGACACCGCCATATGTTGTGAC
AGTGCTTTTTGTGTGCTGGGGAACAATTGTGCAAGTGACAAACGCCAAAC
AAAGAAGTTTCGGGCAAAGATTTAGTACTATTTTTGGACCCAACACATCA
TGATCACCATGAACGAGCTGGTGGATCTGCGCATGCAGCAGCACATAGCA
CACGAGATCTATCGCCAGCAGATCATGCAGCGCATACCAGATCCGTTTCC
GCCGATGCTGCCAATTCCGATGCCACGGCACGTGATCATGCCACCTCGAG
TCACGTTGCCCGGCGTGGAGATGACCCTGCAGAACGACGATCTATGGAAG
CAGTTCCATCAAATTGGCACGGAAATGATCATCACCAAGAGTGGCAGACG
CATGTTCCCCTCGATGCGACTAAGTGTTTCCGGCTTGGAGGACGAGAGCA
ACTATTGCGTGCTCCTCGAGATGGTACCCATTGGCGACTGCCGCTACAAG
TTCTCCGGCTCCCAGTGGGTTCCAGCCGGAGGAGCCGAGCCGCAAAGTCC
CCAGCGGATGTACCTGCATCCGGACAGTCCGGCCACCGGTGCCCATTGGC
AGGCGCAGCCCATACTGTTCAATAAGGTCAAGTTGACCAATAACACGCTG
GATAACAGCGGCCATATTGTCCTGGCCAGCATGCACAAGTATCAGCCGCG
TCTGCACGTCATACGCACCGCTGATCTGGCGCAGATTCCCTGGGCCCCAC
AACAGGCCTTTGTGTTCGCCGAGACGGAGTTCGTGGCCGTGACAGCCTAC
CAGAACGATCGCATCACCAAGCTGAAGATCGACAACAATCCGTTTGCCAA
GGGCTTCCGCGAAACGGGACAATCGCGCTGCAAACGCAAGATGTCTTCAT
CGCCAACGGGCGAGGATCAAGATCAGTCGCCGTCACTATCCCATTCTCAG
TCCCAATCCGAGTCTGACATGTCGCCAACGAAAGGAGGCGGTGAGACAGC
CGGAGGAACATCGTCGATCGGCGATTCGGATGGTCCGCAAATCAAGCGCC
TGAGATCAAATGGCTCAGCCTGCTCCTTATCATCATCGCTGGACGATCAG
TCGGTGCCTGGCGCCAGTTCTTTGGCCCTGGGCTCTCCACCGCCCCATCT
ACATTCGCATTCGCATCCGCATCCCCTCCAGGCGAGGAGTGCCTCCAGCG
TTTTTATGCAGCACTTTCAGCAGAATATGCAGAGCCTGCTGAGGCCATCG
CTTGTGGATTTGGCATGTACCTACTTTGGGAGACCCCATGAGTATGGAGG
AGCGATTCAGGCCTCACCTATGTATCCACCAGCAGCGATGCTACAGGCGG
GTTTGGGCCCACATCCTGGCCTGAACCTTCCACCAGGCGTTTCTGGCGCG
GATCTCATTTCCGATGAGTCGGGAGCCGAAGAACTCGAACTGGATGTGGG
CAGTGAAACGAGCACGTTGGAGCAGTCTACGCAGGAACAGCCACTGGAAC
AACCATCTACAAGGAGCAAGGGCTTCAGCATATCGGCCATTTTGGGGGGA
GGAAGTTAGAGATATTAAAGTTTTAAAACGGGGTATACCTATAGTTTAAT
TGTCTATAGATTAAGTTCTCTAAATCATTTATACATATATACTCATAGTA
CTCATTTTGATATTATACAGATTCTAGCCTGATTAGTACCTAAGTTCAGC
TTAACGTTAAGCCATTAAAGTTAGCTTAAAATATAAGAGAAAAAAAAAAA
AAAAA

RE40937.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:23:02
Subject Length Description Subject Range Query Range Score Percent Strand
Doc2-RA 2129 Doc2-RA 190..2129 1..1940 9685 99.9 Plus
Doc2.b 2370 Doc2.b 431..2370 1..1940 9685 99.9 Plus
Doc2.a 2518 Doc2.a 625..2514 52..1941 9435 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:17:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 9004656..9005594 1939..1001 4455 98.3 Minus
chr3L 24539361 chr3L 9010781..9011220 440..1 2155 99.3 Minus
chr3L 24539361 chr3L 9006681..9006951 865..595 1250 97.4 Minus
chr3L 24539361 chr3L 9009909..9010068 597..438 800 100 Minus
chr3L 24539361 chr3L 9035311..9035581 595..865 710 84.1 Plus
chr3L 24539361 chr3L 9006465..9006602 1003..866 645 97.8 Minus
chr3L 24539361 chr3L 8997797..8998018 636..857 495 81.5 Plus
chr3L 24539361 chr3L 8998138..8998279 862..1003 425 86.6 Plus
chr3L 24539361 chr3L 9036269..9036352 1001..1084 270 88.1 Plus
chr3L 24539361 chr3L 8998344..8998435 1001..1092 265 85.9 Plus
chr3L 24539361 chr3L 9033473..9033565 357..449 240 83.9 Plus
chr3L 24539361 chr3L 9035657..9035787 873..1003 220 77.9 Plus
chr2L 23010047 chr2L 5465136..5465209 989..1062 190 83.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:55:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:17:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9012684..9013624 1941..1001 4690 99.9 Minus
3L 28110227 3L 9018801..9019240 440..1 2200 100 Minus
3L 28110227 3L 9014708..9014977 865..596 1350 100 Minus
3L 28110227 3L 9017929..9018088 597..438 800 100 Minus
3L 28110227 3L 9043385..9043655 595..865 710 84.1 Plus
3L 28110227 3L 9014492..9014629 1003..866 690 100 Minus
3L 28110227 3L 9005813..9006034 636..857 495 81.5 Plus
3L 28110227 3L 9006155..9006296 862..1003 410 85.9 Plus
3L 28110227 3L 9044342..9044425 1001..1084 270 88.1 Plus
3L 28110227 3L 9006361..9006452 1001..1092 265 85.9 Plus
3L 28110227 3L 9041547..9041639 357..449 240 83.9 Plus
3L 28110227 3L 9043731..9043861 873..1003 220 77.9 Plus
2L 23513712 2L 5466038..5466111 989..1062 190 83.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:52:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 9005784..9006724 1941..1001 4690 99.8 Minus
3L 28103327 3L 9011901..9012340 440..1 2200 100 Minus
3L 28103327 3L 9007808..9008077 865..596 1350 100 Minus
3L 28103327 3L 9011029..9011188 597..438 800 100 Minus
3L 28103327 3L 9007592..9007729 1003..866 690 100 Minus
3L 28103327 3L 9036526..9036755 636..865 670 86 Plus
3L 28103327 3L 8998913..8999063 636..786 455 86.7 Plus
3L 28103327 3L 8999255..8999396 862..1003 410 85.9 Plus
3L 28103327 3L 9037442..9037525 1001..1084 270 88 Plus
3L 28103327 3L 8999461..8999552 1001..1092 265 85.8 Plus
3L 28103327 3L 9034647..9034739 357..449 240 83.8 Plus
2L 23513712 2L 5466038..5466111 989..1062 190 83.7 Plus
3L 28103327 3L 9035232..9035296 531..595 160 83 Plus
3L 28103327 3L 9036894..9036961 936..1003 145 80.8 Plus
3L 28103327 3L 8998442..8998497 374..429 145 83.9 Plus
Blast to na_te.dros performed on 2019-03-16 07:17:49 has no hits.

RE40937.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:18:41 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 9004656..9005591 1004..1939 98 <- Minus
chr3L 9006465..9006602 866..1003 97 <- Minus
chr3L 9006681..9006948 598..865 97 <- Minus
chr3L 9009909..9010065 441..597 100 <- Minus
chr3L 9010781..9011220 1..440 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:15:39 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
Doc2-RA 1..1410 350..1759 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:32:43 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
Doc2-RA 1..1410 350..1759 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:30:47 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
Doc2-RA 1..1410 350..1759 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:05:31 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
Doc2-RA 1..1410 350..1759 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:30:43 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
Doc2-RA 1..1410 350..1759 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:58:43 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
Doc2-RA 1..1939 1..1939 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:32:43 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
Doc2-RA 1..1939 1..1939 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:30:47 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
Doc2-RA 7..1945 1..1939 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:05:31 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
Doc2-RA 1..1939 1..1939 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:30:43 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
Doc2-RA 7..1945 1..1939 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:18:41 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9012686..9013621 1004..1939 99 <- Minus
3L 9014492..9014629 866..1003 100 <- Minus
3L 9014708..9014975 598..865 100 <- Minus
3L 9017929..9018085 441..597 100 <- Minus
3L 9018801..9019240 1..440 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:18:41 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9012686..9013621 1004..1939 99 <- Minus
3L 9014492..9014629 866..1003 100 <- Minus
3L 9014708..9014975 598..865 100 <- Minus
3L 9017929..9018085 441..597 100 <- Minus
3L 9018801..9019240 1..440 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:18:41 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9012686..9013621 1004..1939 99 <- Minus
3L 9014492..9014629 866..1003 100 <- Minus
3L 9014708..9014975 598..865 100 <- Minus
3L 9017929..9018085 441..597 100 <- Minus
3L 9018801..9019240 1..440 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:30:47 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9005786..9006721 1004..1939 99 <- Minus
arm_3L 9007592..9007729 866..1003 100 <- Minus
arm_3L 9007808..9008075 598..865 100 <- Minus
arm_3L 9011029..9011185 441..597 100 <- Minus
arm_3L 9011901..9012340 1..440 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:39:19 Download gff for RE40937.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9005786..9006721 1004..1939 99 <- Minus
3L 9007592..9007729 866..1003 100 <- Minus
3L 9007808..9008075 598..865 100 <- Minus
3L 9011029..9011185 441..597 100 <- Minus
3L 9011901..9012340 1..440 100   Minus

RE40937.pep Sequence

Translation from 349 to 1758

> RE40937.pep
MITMNELVDLRMQQHIAHEIYRQQIMQRIPDPFPPMLPIPMPRHVIMPPR
VTLPGVEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDES
NYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHW
QAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIRTADLAQIPWAP
QQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQSRCKRKMSS
SPTGEDQDQSPSLSHSQSQSESDMSPTKGGGETAGGTSSIGDSDGPQIKR
LRSNGSACSLSSSLDDQSVPGASSLALGSPPPHLHSHSHPHPLQARSASS
VFMQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGAIQASPMYPPAAMLQA
GLGPHPGLNLPPGVSGADLISDESGAEELELDVGSETSTLEQSTQEQPLE
QPSTRSKGFSISAILGGGS*

RE40937.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 22:47:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10130-PA 461 GF10130-PA 1..461 1..469 1824 84.3 Plus
Dana\GF24375-PA 385 GF24375-PA 1..282 1..304 1176 71 Plus
Dana\GF24374-PA 404 GF24374-PA 1..254 1..249 1086 79.1 Plus
Dana\GF22584-PA 668 GF22584-PA 187..382 52..240 538 50 Plus
Dana\GF14390-PA 662 GF14390-PA 276..477 53..241 526 50.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:47:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15041-PA 467 GG15041-PA 1..467 1..469 2400 96.4 Plus
Dere\GG14369-PA 395 GG14369-PA 1..394 1..466 1209 56.1 Plus
Dere\GG14368-PA 428 GG14368-PA 1..255 1..252 1066 77.3 Plus
Dere\GG19051-PA 708 GG19051-PA 188..387 48..240 535 49.5 Plus
Dere\GG25071-PA 667 GG25071-PA 281..482 53..241 526 50 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 22:47:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14955-PA 478 GH14955-PA 1..478 1..469 1746 72.9 Plus
Dgri\GH16541-PA 389 GH16541-PA 1..250 1..248 1147 81 Plus
Dgri\GH16540-PA 442 GH16540-PA 1..258 1..252 1046 73.6 Plus
Dgri\GH12075-PA 991 GH12075-PA 342..563 57..259 546 44.6 Plus
Dgri\GH12234-PA 722 GH12234-PA 192..391 48..240 532 50 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:37
Subject Length Description Subject Range Query Range Score Percent Strand
Doc2-PA 469 CG5187-PA 1..469 1..469 2466 100 Plus
Doc1-PA 391 CG5133-PA 1..389 1..465 1177 54.7 Plus
Doc3-PA 424 CG5093-PA 1..255 1..252 1065 77.2 Plus
Doc1-PB 356 CG5133-PB 1..354 36..465 1026 52.9 Plus
bi-PG 971 CG3578-PG 296..535 9..259 626 46.7 Plus
bi-PE 970 CG3578-PE 296..534 9..259 617 46.5 Plus
bi-PD 974 CG3578-PD 296..538 9..259 616 46.2 Plus
bi-PC 972 CG3578-PC 296..535 9..259 614 46.3 Plus
bi-PB 972 CG3578-PB 296..535 9..259 614 46.3 Plus
bi-PA 972 CG3578-PA 296..535 9..259 614 46.3 Plus
bi-PF 1023 CG3578-PF 296..535 9..259 614 46.3 Plus
org-1-PB 699 CG11202-PB 188..571 48..417 555 35.3 Plus
org-1-PA 699 CG11202-PA 188..571 48..417 555 35.3 Plus
H15-PB 659 CG6604-PB 273..474 53..241 509 50 Plus
H15-PA 660 CG6604-PA 274..475 53..241 509 50 Plus
mid-PA 580 CG6634-PA 183..384 53..241 494 49 Plus
mid-PB 580 CG6634-PB 183..384 53..241 494 49 Plus
byn-PC 599 CG7260-PC 87..262 56..236 442 47 Plus
byn-PB 697 CG7260-PB 87..262 56..236 442 47 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 22:47:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11482-PA 483 GI11482-PA 1..483 1..469 1771 73.6 Plus
Dmoj\GI13831-PA 393 GI13831-PA 1..250 1..248 1168 82.4 Plus
Dmoj\GI13829-PA 432 GI13829-PA 1..252 1..251 1114 79.4 Plus
Dmoj\GI15769-PA 719 GI15769-PA 199..398 48..240 530 49.5 Plus
Dmoj\GI17986-PA 592 GI17986-PA 189..390 53..241 525 49.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 22:47:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15081-PA 486 GL15081-PA 1..485 1..467 1806 75.9 Plus
Dper\GL15034-PA 392 GL15034-PA 1..391 1..466 1179 54.1 Plus
Dper\GL15033-PA 422 GL15033-PA 1..255 1..252 1089 77.7 Plus
Dper\GL14298-PA 1478 GL14298-PA 522..761 9..259 635 46.3 Plus
Dper\GL20248-PA 712 GL20248-PA 210..399 58..240 536 51.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:47:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18721-PA 486 GA18721-PA 1..485 1..467 1806 75.9 Plus
Dpse\GA18682-PA 392 GA18682-PA 1..391 1..466 1179 54.1 Plus
Dpse\GA18655-PA 424 GA18655-PA 1..255 1..252 1089 77.7 Plus
Dpse\GA22741-PA 983 GA22741-PA 352..558 57..259 637 52.7 Plus
Dpse\GA10837-PA 739 GA10837-PA 228..427 48..240 537 49.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:47:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24895-PA 467 GM24895-PA 1..467 1..469 2452 98.7 Plus
Dsec\GM25113-PA 391 GM25113-PA 1..282 1..304 1194 72.3 Plus
Dsec\GM25112-PA 424 GM25112-PA 1..255 1..252 1062 77 Plus
Dsec\GM12345-PA 559 GM12345-PA 324..516 57..246 625 53.9 Plus
Dsec\GM21356-PA 695 GM21356-PA 194..383 58..240 532 50.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:47:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12943-PA 582 GD12943-PA 198..582 83..469 2015 98.4 Plus
Dsim\GD14149-PA 391 GD14149-PA 1..282 1..304 1191 72 Plus
Dsim\GD14148-PA 424 GD14148-PA 1..255 1..252 1062 77 Plus
Dsim\GD23340-PA 665 GD23340-PA 278..479 53..241 528 50 Plus
Dsim\GD23341-PA 581 GD23341-PA 184..385 53..241 520 49 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:47:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11697-PA 386 GJ11697-PA 1..282 1..304 1166 71.3 Plus
Dvir\GJ11695-PA 420 GJ11695-PA 1..259 1..257 1128 78.5 Plus
Dvir\bi-PA 975 GJ16959-PA 346..552 57..259 637 52.7 Plus
Dvir\GJ13677-PA 348 GJ13677-PA 98..348 212..469 595 55.4 Plus
Dvir\GJ18625-PA 706 GJ18625-PA 204..393 58..240 531 51.1 Plus
Dvir\GJ13677-PA 348 GJ13677-PA 1..97 1..97 444 84.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 22:47:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12279-PA 540 GK12279-PA 1..540 1..469 1625 65.3 Plus
Dwil\GK12353-PA 408 GK12353-PA 1..251 1..248 1156 81.7 Plus
Dwil\GK12352-PA 425 GK12352-PA 1..270 1..270 1050 73.3 Plus
Dwil\GK15734-PA 953 GK15734-PA 336..542 57..259 635 52.7 Plus
Dwil\GK19893-PA 757 GK19893-PA 228..417 58..240 534 51.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:47:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21264-PA 466 GE21264-PA 1..466 1..469 2371 95.5 Plus
Dyak\GE20800-PA 388 GE20800-PA 1..387 1..466 1193 54.9 Plus
Dyak\GE20799-PA 422 GE20799-PA 1..255 1..252 1062 76.6 Plus
Dyak\GE16345-PA 961 GE16345-PA 324..530 57..259 637 52.7 Plus
Dyak\GE17455-PA 716 GE17455-PA 183..382 48..240 538 49.5 Plus

RE40937.hyp Sequence

Translation from 349 to 1758

> RE40937.hyp
MITMNELVDLRMQQHIAHEIYRQQIMQRIPDPFPPMLPIPMPRHVIMPPR
VTLPGVEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDES
NYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHW
QAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIRTADLAQIPWAP
QQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQSRCKRKMSS
SPTGEDQDQSPSLSHSQSQSESDMSPTKGGGETAGGTSSIGDSDGPQIKR
LRSNGSACSLSSSLDDQSVPGASSLALGSPPPHLHSHSHPHPLQARSASS
VFMQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGAIQASPMYPPAAMLQA
GLGPHPGLNLPPGVSGADLISDESGAEELELDVGSETSTLEQSTQEQPLE
QPSTRSKGFSISAILGGGS*

RE40937.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:01:08
Subject Length Description Subject Range Query Range Score Percent Strand
Doc2-PA 469 CG5187-PA 1..469 1..469 2466 100 Plus
Doc1-PA 391 CG5133-PA 1..389 1..465 1177 54.7 Plus
Doc3-PA 424 CG5093-PA 1..255 1..252 1065 77.2 Plus
Doc1-PB 356 CG5133-PB 1..354 36..465 1026 52.9 Plus
bi-PG 971 CG3578-PG 296..535 9..259 626 46.7 Plus