Clone RE41180 Report

Search the DGRC for RE41180

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:411
Well:80
Vector:pFlc-1
Associated Gene/Transcriptotk2-RA
Protein status:RE41180.pep: gold
Preliminary Size:1302
Sequenced Size:1981

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8964 2002-01-01 Sim4 clustering to Release 2
CG8964 2002-02-27 Blastp of sequenced clone
CG8964 2003-01-01 Sim4 clustering to Release 3
CG8964 2008-04-29 Release 5.5 accounting
CG8964 2008-08-15 Release 5.9 accounting
CG8964 2008-12-18 5.12 accounting

Clone Sequence Records

RE41180.complete Sequence

1981 bp (1981 high quality bases) assembled on 2002-02-27

GenBank Submission: AY089628

> RE41180.complete
AGTAGAGTTCCGAAACCGAACGCGGAAGGTTGTGCCCTGGTCACGAGATA
GCGTTACCATCAGTGGGTCTCCTTGAAACCGAATCGCTCGCAAGATCCCC
GGGCTCTGCCTCTGTGGCAGGATAATAAAGCGTGACGCGTGTGCGTAACA
TAAAAATAACCATAAACCACTCCGGGCGGAGTAAATGAAGTGAGGTGAAG
TGAAGCAAGGGGCAAACAGAGTCCGAAACAGCAACTGAAACTGAAACAGA
AACCGACGAAGGCAAACGGAATTCCTTCAAAAATCGGCAAATAAACAAGA
AGAAAAGAAGAGCACACACCGGTTTTGTGCGAAAGAAGCGAAGGAAGTAC
GAAGTGAAATCAAAAGAATTCTTTAGCTCGAAATGGGGCTGAACGGAAGA
CGACGATTGTTGGGCTGCGGCCTGGGATTCTTCTGCCTGATCTTCTGCTC
TTACGCCGCGCCAGCATCATTTGAGGATGTGAGCATCTCAAGGGGTCCGA
AATCCTCGATTACCATCAAGGAACAAAGTTCGTTGCAATTGCCCTGTGAC
TACCAACTGCCGGATGGGTATCTTCAGAAGAGCAGCGTCATCCTGCGCTG
GCGAAAGGATAGCAAAACGTTGCGTCAAGTAGAGCTGGGCAGGATGGACA
GCACAACGAGCGAACCACAGCTGGAAACCATGCTGCGGGAGGATTCCCGT
GTGGCGCTGAGCAAGGACAGTGGCGCCCTGCAATTCACAAGCGTGCTGGC
CAGCGATGCCGGTCAGTATCAGTGCCAGTTGGTCATCGACGACTCCGTGG
CTGCCAGCTCCAGCAGTGGGGTGCTCCTGGTTATTGAGCAACTAAAGTTC
GTGCCACAGCCAACCTCCAAAAACTTGGAGTTGGGAACTCTTAGTAAGGT
CCACTGCAAGGCGCAGGGAACACCTGCTCCACAAGTCAAATGGATGAGGG
AAACCCAGCTACCTCTCCCTGTTAACGTAACCGATCAGAATGGCACGCTG
ATTTTCAACCAGGTCAGCAACGAGCAACGGGGTCAGTACACCTGCATCGC
CTCCAATAGCCAGGGTCAAATCACGGCCACCGTGTCCATCAATGTGGTGG
TGGCCCCGAAGTTCAGTGTTCCGCCGGAGGGACCCATCGAGGTCGCAGAA
GCCGGAACTGCCGTGATCCACTGCCAGGCAATCGGAGAGCCAAAACCCAC
CATTCAATGGGACAAGGATCTCACCTACTTGAACGAGAATAACACGGATC
CGGAACGCTTTTCCCTAATGGAGAACGGAACTCTGGAGATACGCAATGTT
CGGCCAGAGGATGAGGGTCGCTACGGCTGCACCATTGGCAGCAGTGCGGG
CTTGAAGCGAGAGGATGTTCTGCTGGTGTTGAAGTCAAGTAAATCCGCGT
CCAATTCAATAGTGACCCGGATTATCATTGTGATCATTTGCCTGGCCTTC
CTGTACTTTGTGCTGGTGCTTGGCCTAAAGGTGTGGTACCGCTATCGTCG
TCACCTGGGCAAGGTGCAGCTGGAAGATGGCCATGTCAATGGGCCCACCG
ATGGTCAGGAGCACGACCATCACGAAAACGAGCCCTGCCTGACGGAGGCC
AACTCCAGCAAGAATCTGAAGAGCAAGCTGAGGGAGAGCACGATACTGGA
GCAGGAGTCGCAGGTGGCCGACGATATTGTGTGAGGAGTAGTGCTCCTGC
GCCTGTGGAGTAACCTTTCAGCCACTTTCCATGATCTCGCTAAACATGCC
CCTCGAAAGTTACTCCGTTCTGTTGTTGAGAATCAAAAAGGAACTTGTGA
AATCCCCCAGAAATCTATTTGTATTTATATATTTATCTAGTTTATATATA
TATAAATATTTTATGTATTTATGCATGTGTGTGTCTCTGTGTATATATCC
CATGTACAGTTATTTTTTAGTAGAATAAATATTTTATGGCTCTCATAGAG
CCCCATTTTATAGCACAAAAAAAAAAAAAAA

RE41180.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:23:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG8964-RA 2153 CG8964-RA 187..2150 1..1964 9805 99.9 Plus
otk.a 3997 otk.a 2484..2603 1269..1388 255 80.8 Plus
otk.b 4352 otk.b 2163..2282 1269..1388 255 80.8 Plus
otk.a 3997 otk.a 2252..2356 1037..1141 150 76.1 Plus
otk.b 4352 otk.b 1931..2035 1037..1141 150 76.1 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:29:05
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 7910376..7911391 1964..949 5005 99.5 Minus
chr2R 21145070 chr2R 7911478..7911973 950..455 2435 99.4 Minus
chr2R 21145070 chr2R 7912044..7912498 455..1 2245 99.6 Minus
chr2R 21145070 chr2R 7890993..7891340 1384..1037 345 73.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:55:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:29:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12023144..12024163 1968..949 5085 99.9 Minus
2R 25286936 2R 12024250..12024745 950..455 2465 99.8 Minus
2R 25286936 2R 12024816..12025270 455..1 2275 100 Minus
2R 25286936 2R 12003773..12004124 1388..1037 380 73.9 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:52:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 12024343..12025362 1968..949 5085 99.9 Minus
2R 25260384 2R 12025449..12025944 950..455 2465 99.7 Minus
2R 25260384 2R 12026015..12026469 455..1 2275 100 Minus
2R 25260384 2R 12004972..12005091 1388..1269 255 80.8 Minus
2R 25260384 2R 12005219..12005323 1141..1037 150 76.1 Minus
Blast to na_te.dros performed 2019-03-15 16:29:04
Subject Length Description Subject Range Query Range Score Percent Strand
mdg3 5519 mdg3 DMMDG3 5519bp Derived from X95908 (e990667) (Rel. 49, Last updated, Version 3). 5083..5129 279..325 118 72.3 Plus
TAHRE 10463 TAHRE OSV 10463bp 1966..2085 918..1038 116 58.5 Plus

RE41180.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:30:10 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 7910528..7911390 950..1812 99 <- Minus
chr2R 7911479..7911972 456..949 99 <- Minus
chr2R 7912044..7912498 1..455 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:15:57 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
CG8964-RA 1..1302 383..1684 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:32:47 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
CG8964-RA 1..1302 383..1684 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:02:51 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
CG8964-RA 1..1302 383..1684 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:05:33 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
CG8964-RA 1..1302 383..1684 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:37:28 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
otk2-RA 1..1302 383..1684 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:58:47 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
CG8964-RA 1..1966 1..1966 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:32:47 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
CG8964-RA 1..1966 1..1966 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:02:51 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
CG8964-RA 3..1968 1..1966 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:05:33 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
CG8964-RA 1..1966 1..1966 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:37:28 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
otk2-RA 3..1968 1..1966 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:30:10 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12023146..12024162 950..1966 99 <- Minus
2R 12024251..12024744 456..949 99 <- Minus
2R 12024816..12025270 1..455 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:30:10 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12023146..12024162 950..1966 99 <- Minus
2R 12024251..12024744 456..949 99 <- Minus
2R 12024816..12025270 1..455 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:30:10 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12023146..12024162 950..1966 99 <- Minus
2R 12024251..12024744 456..949 99 <- Minus
2R 12024816..12025270 1..455 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:02:51 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7910651..7911667 950..1966 99 <- Minus
arm_2R 7911756..7912249 456..949 99 <- Minus
arm_2R 7912321..7912775 1..455 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:39:21 Download gff for RE41180.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12024345..12025361 950..1966 99 <- Minus
2R 12025450..12025943 456..949 99 <- Minus
2R 12026015..12026469 1..455 100   Minus

RE41180.pep Sequence

Translation from 382 to 1683

> RE41180.pep
MGLNGRRRLLGCGLGFFCLIFCSYAAPASFEDVSISRGPKSSITIKEQSS
LQLPCDYQLPDGYLQKSSVILRWRKDSKTLRQVELGRMDSTTSEPQLETM
LREDSRVALSKDSGALQFTSVLASDAGQYQCQLVIDDSVAASSSSGVLLV
IEQLKFVPQPTSKNLELGTLSKVHCKAQGTPAPQVKWMRETQLPLPVNVT
DQNGTLIFNQVSNEQRGQYTCIASNSQGQITATVSINVVVAPKFSVPPEG
PIEVAEAGTAVIHCQAIGEPKPTIQWDKDLTYLNENNTDPERFSLMENGT
LEIRNVRPEDEGRYGCTIGSSAGLKREDVLLVLKSSKSASNSIVTRIIIV
IICLAFLYFVLVLGLKVWYRYRRHLGKVQLEDGHVNGPTDGQEHDHHENE
PCLTEANSSKNLKSKLRESTILEQESQVADDIV*

RE41180.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 22:48:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12648-PA 430 GF12648-PA 1..430 1..433 1935 85.9 Plus
Dana\GF12649-PA 1037 GF12649-PA 247..667 25..431 1103 53.2 Plus
Dana\GF15018-PA 1534 GF15018-PA 357..662 37..357 247 27.2 Plus
Dana\GF11332-PA 1392 GF11332-PA 212..418 112..317 245 30.2 Plus
Dana\GF21177-PA 2245 GF21177-PA 349..564 123..333 229 30.9 Plus
Dana\GF11332-PA 1392 GF11332-PA 296..536 105..340 183 26 Plus
Dana\GF15018-PA 1534 GF15018-PA 193..435 113..323 181 23.3 Plus
Dana\GF21177-PA 2245 GF21177-PA 427..672 103..347 179 26.8 Plus
Dana\GF11332-PA 1392 GF11332-PA 55..243 155..328 166 27.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:48:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20236-PA 432 GG20236-PA 1..432 1..433 2127 93.8 Plus
Dere\GG22613-PA 1033 GG22613-PA 246..665 25..431 1096 53.9 Plus
Dere\GG24990-PA 1535 GG24990-PA 401..659 68..337 239 28 Plus
Dere\GG20100-PA 1429 GG20100-PA 248..454 112..317 226 29.4 Plus
Dere\GG16771-PA 2053 GG16771-PA 388..632 99..335 215 30.6 Plus
Dere\GG20100-PA 1429 GG20100-PA 332..572 105..340 189 24.9 Plus
Dere\GG24990-PA 1535 GG24990-PA 211..453 113..323 183 23.3 Plus
Dere\GG16771-PA 2053 GG16771-PA 635..809 150..326 175 30.3 Plus
Dere\GG20100-PA 1429 GG20100-PA 91..267 155..316 165 28.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 22:48:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21046-PA 442 GH21046-PA 25..442 20..433 1659 77.5 Plus
Dgri\GH21048-PA 1621 GH21048-PA 841..1245 23..415 1099 54.4 Plus
Dgri\GH22099-PA 1391 GH22099-PA 185..391 112..317 232 30.7 Plus
Dgri\GH10066-PA 1639 GH10066-PA 442..700 68..337 231 27.3 Plus
Dgri\GH22035-PA 1335 GH22035-PA 6..225 113..323 208 30.4 Plus
Dgri\GH22099-PA 1391 GH22099-PA 269..509 105..340 203 27.3 Plus
Dgri\GH22099-PA 1391 GH22099-PA 67..302 97..323 173 26.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
otk2-PA 433 CG8964-PA 1..433 1..433 2224 100 Plus
otk-PB 1019 CG8967-PB 246..665 25..431 1064 53.6 Plus
otk-PA 1033 CG8967-PA 246..665 25..431 1064 53.6 Plus
tutl-PH 1533 CG15427-PH 373..657 37..337 246 26.8 Plus
tutl-PE 902 CG15427-PE 350..632 39..337 244 26.7 Plus
tutl-PC 903 CG15427-PC 350..632 39..337 244 26.7 Plus
tutl-PI 963 CG15427-PI 350..632 39..337 244 26.7 Plus
tutl-PF 963 CG15427-PF 350..632 39..337 244 26.7 Plus
tutl-PK 991 CG15427-PK 350..632 39..337 244 26.7 Plus
tutl-PG 1508 CG15427-PG 350..632 39..337 244 26.7 Plus
tutl-PD 1508 CG15427-PD 350..632 39..337 244 26.7 Plus
tutl-PJ 1536 CG15427-PJ 350..632 39..337 244 26.7 Plus
robo1-PC 1395 CG13521-PC 214..438 112..335 241 29.7 Plus
robo1-PA 1395 CG13521-PA 214..438 112..335 241 29.7 Plus
Dscam3-PD 1006 CG31190-PD 397..632 109..335 225 30.6 Plus
Dscam3-PF 2077 CG31190-PF 397..632 109..335 225 30.6 Plus
Dscam3-PE 2087 CG31190-PE 397..632 109..335 225 30.6 Plus
sdk-PH 2220 CG5227-PH 328..559 123..349 224 27.1 Plus
sdk-PF 2224 CG5227-PF 328..559 123..349 224 27.1 Plus
sdk-PE 2224 CG5227-PE 328..559 123..349 224 27.1 Plus
sdk-PD 2224 CG5227-PD 328..559 123..349 224 27.1 Plus
sdk-PB 2224 CG5227-PB 328..559 123..349 224 27.1 Plus
sdk-PA 2224 CG5227-PA 328..559 123..349 224 27.1 Plus
sdk-PC 2232 CG5227-PC 328..559 123..349 224 27.1 Plus
tutl-PE 902 CG15427-PE 209..426 113..323 219 24.5 Plus
tutl-PC 903 CG15427-PC 209..426 113..323 219 24.5 Plus
tutl-PI 963 CG15427-PI 209..426 113..323 219 24.5 Plus
tutl-PF 963 CG15427-PF 209..426 113..323 219 24.5 Plus
tutl-PK 991 CG15427-PK 209..426 113..323 219 24.5 Plus
tutl-PG 1508 CG15427-PG 209..426 113..323 219 24.5 Plus
tutl-PD 1508 CG15427-PD 209..426 113..323 219 24.5 Plus
tutl-PJ 1536 CG15427-PJ 209..426 113..323 219 24.5 Plus
wrapper-PA 500 CG10382-PA 42..322 41..331 217 24.9 Plus
Fas2-PB 773 CG3665-PB 189..407 113..316 211 28.4 Plus
Fas2-PC 811 CG3665-PC 189..407 113..316 211 28.4 Plus
Fas2-PH 832 CG3665-PH 189..407 113..316 211 28.4 Plus
Fas2-PD 844 CG3665-PD 189..407 113..316 211 28.4 Plus
Fas2-PF 859 CG3665-PF 204..422 113..316 211 28.4 Plus
Fas2-PA 873 CG3665-PA 189..407 113..316 211 28.4 Plus
Fas2-PG 885 CG3665-PG 189..407 113..316 211 28.4 Plus
Nrg-PH 1239 CG1634-PH 311..518 125..334 211 26.8 Plus
Nrg-PF 1239 CG1634-PF 311..518 125..334 211 26.8 Plus
Nrg-PD 1239 CG1634-PD 311..518 125..334 211 26.8 Plus
Nrg-PC 1239 CG1634-PC 311..518 125..334 211 26.8 Plus
Nrg-PA 1239 CG1634-PA 311..518 125..334 211 26.8 Plus
Nrg-PI 1302 CG1634-PI 311..518 125..334 211 26.8 Plus
Nrg-PE 1302 CG1634-PE 311..518 125..334 211 26.8 Plus
Nrg-PB 1302 CG1634-PB 311..518 125..334 211 26.8 Plus
Nrg-PG 1309 CG1634-PG 311..518 125..334 211 26.8 Plus
CG34353-PB 566 CG34353-PB 147..371 116..342 209 28.4 Plus
CG34353-PA 566 CG34353-PA 147..371 116..342 209 28.4 Plus
CG34353-PC 581 CG34353-PC 147..371 116..342 209 28.4 Plus
robo1-PC 1395 CG13521-PC 298..521 105..323 205 26.3 Plus
robo1-PA 1395 CG13521-PA 298..521 105..323 205 26.3 Plus
Dscam3-PC 2007 CG31190-PC 397..656 109..335 205 28.3 Plus
robo2-PA 1463 CG5481-PA 242..407 112..276 203 32.4 Plus
robo2-PB 1519 CG5481-PB 242..407 112..276 203 32.4 Plus
Dscam1-PAT 2018 CG17800-PAT 676..910 111..334 202 26.6 Plus
Dscam1-PAJ 2030 CG17800-PAJ 678..907 116..334 200 27.1 Plus
Dscam1-PW 2019 CG17800-PW 676..911 110..334 199 26.4 Plus
Dscam1-PAU 2018 CG17800-PAU 675..910 110..334 198 26.4 Plus
robo2-PA 1463 CG5481-PA 298..558 67..323 196 27.2 Plus
robo2-PB 1519 CG5481-PB 298..558 67..323 196 27.2 Plus
tutl-PH 1533 CG15427-PH 209..451 113..323 188 22.9 Plus
Nrg-PH 1239 CG1634-PH 183..425 104..331 186 27.9 Plus
Nrg-PF 1239 CG1634-PF 183..425 104..331 186 27.9 Plus
Nrg-PD 1239 CG1634-PD 183..425 104..331 186 27.9 Plus
Nrg-PC 1239 CG1634-PC 183..425 104..331 186 27.9 Plus
Nrg-PA 1239 CG1634-PA 183..425 104..331 186 27.9 Plus
Nrg-PI 1302 CG1634-PI 183..425 104..331 186 27.9 Plus
Nrg-PE 1302 CG1634-PE 183..425 104..331 186 27.9 Plus
Nrg-PB 1302 CG1634-PB 183..425 104..331 186 27.9 Plus
Nrg-PG 1309 CG1634-PG 183..425 104..331 186 27.9 Plus
sdk-PH 2220 CG5227-PH 406..652 103..347 182 25.4 Plus
sdk-PF 2224 CG5227-PF 406..652 103..347 182 25.4 Plus
sdk-PE 2224 CG5227-PE 406..652 103..347 182 25.4 Plus
sdk-PD 2224 CG5227-PD 406..652 103..347 182 25.4 Plus
sdk-PB 2224 CG5227-PB 406..652 103..347 182 25.4 Plus
sdk-PA 2224 CG5227-PA 406..652 103..347 182 25.4 Plus
sdk-PC 2232 CG5227-PC 406..652 103..347 182 25.4 Plus
robo2-PA 1463 CG5481-PA 144..360 113..323 181 25.2 Plus
robo2-PB 1519 CG5481-PB 144..360 113..323 181 25.2 Plus
Dscam1-PW 2019 CG17800-PW 495..714 116..333 181 27.7 Plus
Fas2-PF 859 CG3665-PF 88..325 76..324 179 27.1 Plus
robo1-PC 1395 CG13521-PC 41..242 139..325 177 27 Plus
robo1-PA 1395 CG13521-PA 41..242 139..325 177 27 Plus
Dscam1-PAT 2018 CG17800-PAT 307..524 113..331 175 26.4 Plus
Dscam1-PAJ 2030 CG17800-PAJ 305..522 113..331 175 26.4 Plus
Dscam1-PW 2019 CG17800-PW 308..525 113..331 175 26.4 Plus
Dscam1-PAU 2018 CG17800-PAU 307..524 113..331 175 26.4 Plus
Fas2-PB 773 CG3665-PB 94..310 109..324 174 27 Plus
Fas2-PC 811 CG3665-PC 94..310 109..324 174 27 Plus
Fas2-PH 832 CG3665-PH 94..310 109..324 174 27 Plus
Fas2-PD 844 CG3665-PD 94..310 109..324 174 27 Plus
Fas2-PA 873 CG3665-PA 94..310 109..324 174 27 Plus
Fas2-PG 885 CG3665-PG 94..310 109..324 174 27 Plus
Dscam3-PD 1006 CG31190-PD 635..809 150..326 173 30.3 Plus
Dscam3-PF 2077 CG31190-PF 635..809 150..326 173 30.3 Plus
Dscam3-PE 2087 CG31190-PE 635..809 150..326 173 30.3 Plus
Dscam3-PC 2007 CG31190-PC 659..833 150..326 173 30.3 Plus
Dscam1-PAU 2018 CG17800-PAU 494..713 116..333 170 27.5 Plus
Dscam1-PAJ 2030 CG17800-PAJ 492..700 116..323 165 28.8 Plus
Dscam1-PW 2019 CG17800-PW 201..411 113..318 158 26.3 Plus
Dscam1-PAT 2018 CG17800-PAT 201..410 113..318 156 25.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 22:48:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18648-PA 380 GI18648-PA 1..380 53..433 1518 78 Plus
Dmoj\GI18649-PA 1045 GI18649-PA 253..668 23..431 1094 53.1 Plus
Dmoj\GI19234-PA 1401 GI19234-PA 189..395 112..317 229 30.2 Plus
Dmoj\GI21512-PA 2220 GI21512-PA 326..541 123..333 214 29.5 Plus
Dmoj\GI19234-PA 1401 GI19234-PA 273..513 105..340 205 27.3 Plus
Dmoj\GI19122-PA 1512 GI19122-PA 181..400 113..323 205 29.2 Plus
Dmoj\GI19234-PA 1401 GI19234-PA 69..323 94..340 174 26.4 Plus
Dmoj\GI21512-PA 2220 GI21512-PA 425..649 125..347 161 26 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 22:48:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11545-PA 1035 GL11545-PA 252..668 31..431 1072 53.4 Plus
Dper\GL11544-PA 249 GL11544-PA 5..249 188..433 1056 86.7 Plus
Dper\GL11543-PA 183 GL11543-PA 1..168 3..172 640 71.8 Plus
Dper\GL14010-PA 1635 GL14010-PA 412..691 68..357 239 27.4 Plus
Dper\GL10711-PA 1362 GL10711-PA 181..387 112..317 224 29.7 Plus
Dper\GL10711-PA 1362 GL10711-PA 265..505 105..340 187 26.1 Plus
Dper\GL14010-PA 1635 GL14010-PA 222..464 113..323 185 23.7 Plus
Dper\GL10711-PA 1362 GL10711-PA 24..200 155..316 163 28.5 Plus
Dper\GL10711-PA 1362 GL10711-PA 63..298 97..323 163 27.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:48:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21440-PA 428 GA21440-PA 1..428 3..433 1795 81.5 Plus
Dpse\GA21443-PA 1037 GA21443-PA 252..668 31..431 1073 53.4 Plus
Dpse\GA13718-PA 1616 GA13718-PA 412..670 68..337 240 27.3 Plus
Dpse\GA27700-PA 2227 GA27700-PA 332..547 123..333 232 30.3 Plus
Dpse\GA12341-PA 1398 GA12341-PA 217..423 112..317 224 29.4 Plus
Dpse\GA12341-PA 1398 GA12341-PA 301..541 105..340 187 26.1 Plus
Dpse\GA13718-PA 1616 GA13718-PA 222..464 113..323 185 23.7 Plus
Dpse\GA27700-PA 2227 GA27700-PA 382..655 51..347 172 25 Plus
Dpse\GA12341-PA 1398 GA12341-PA 60..236 155..316 163 28.5 Plus
Dpse\GA12341-PA 1398 GA12341-PA 99..334 97..323 162 27.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:48:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20392-PA 433 GM20392-PA 1..433 1..433 2268 98.2 Plus
Dsec\GM20393-PA 1029 GM20393-PA 244..661 27..431 1095 54.1 Plus
Dsec\GM18461-PA 1508 GM18461-PA 374..632 68..337 242 27.7 Plus
Dsec\GM15615-PA 1429 GM15615-PA 248..454 112..317 231 30.3 Plus
Dsec\GM19085-PA 1249 GM19085-PA 328..559 123..349 216 28 Plus
Dsec\GM18461-PA 1508 GM18461-PA 209..426 113..323 212 25 Plus
Dsec\GM15615-PA 1429 GM15615-PA 332..572 105..340 198 25.7 Plus
Dsec\GM19085-PA 1249 GM19085-PA 406..652 103..347 173 26.2 Plus
Dsec\GM15615-PA 1429 GM15615-PA 91..267 155..316 162 28.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:48:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25867-PA 433 GD25867-PA 1..433 1..433 2266 97.7 Plus
Dsim\GD25868-PA 1029 GD25868-PA 242..661 25..431 1092 53.7 Plus
Dsim\GD25109-PA 1429 GD25109-PA 248..454 112..317 228 30.3 Plus
Dsim\GD20229-PA 753 GD20229-PA 388..632 99..335 217 30.6 Plus
Dsim\GD16523-PA 2222 GD16523-PA 326..557 123..349 215 28 Plus
Dsim\GD25109-PA 1429 GD25109-PA 332..572 105..340 195 25.3 Plus
Dsim\GD16523-PA 2222 GD16523-PA 404..650 103..347 172 26.2 Plus
Dsim\GD25109-PA 1429 GD25109-PA 91..267 155..316 162 28.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:48:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21664-PA 435 GJ21664-PA 5..435 3..433 1648 75 Plus
Dvir\GJ21665-PA 1017 GJ21665-PA 236..636 27..415 1119 55.7 Plus
Dvir\GJ16222-PA 1552 GJ16222-PA 381..639 68..337 233 27.7 Plus
Dvir\GJ20309-PA 1390 GJ20309-PA 168..392 88..317 228 30.1 Plus
Dvir\GJ16222-PA 1552 GJ16222-PA 216..433 113..323 203 25 Plus
Dvir\GJ13736-PA 447 GJ13736-PA 22..284 35..323 201 25.5 Plus
Dvir\GJ20309-PA 1390 GJ20309-PA 270..510 105..340 195 26.5 Plus
Dvir\GJ20309-PA 1390 GJ20309-PA 66..303 94..323 170 27.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 22:48:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21982-PA 440 GK21982-PA 2..440 5..433 1647 74.6 Plus
Dwil\GK21983-PA 1059 GK21983-PA 259..675 31..415 1048 53.1 Plus
Dwil\GK21847-PA 1406 GK21847-PA 183..389 112..317 235 30 Plus
Dwil\GK24611-PA 1580 GK24611-PA 386..653 68..337 233 26 Plus
Dwil\GK16432-PA 2188 GK16432-PA 280..495 123..333 218 30.6 Plus
Dwil\GK24611-PA 1580 GK24611-PA 221..438 113..323 203 24.5 Plus
Dwil\GK21847-PA 1406 GK21847-PA 268..507 106..340 195 26.6 Plus
Dwil\GK16432-PA 2188 GK16432-PA 358..603 103..347 169 26.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:48:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13481-PA 432 GE13481-PA 1..432 1..433 2113 95.6 Plus
Dyak\GE13482-PA 1033 GE13482-PA 246..665 25..431 1108 54.3 Plus
Dyak\GE18278-PA 1538 GE18278-PA 404..683 68..357 243 27.7 Plus
Dyak\GE11841-PA 1436 GE11841-PA 253..459 112..317 235 30.3 Plus
Dyak\GE15791-PA 1239 GE15791-PA 311..518 125..334 210 26.8 Plus
Dyak\GE18278-PA 1538 GE18278-PA 214..456 113..323 184 23.3 Plus
Dyak\GE11841-PA 1436 GE11841-PA 337..560 105..323 183 25.9 Plus
Dyak\GE15791-PA 1239 GE15791-PA 183..429 104..335 181 27.6 Plus
Dyak\GE11841-PA 1436 GE11841-PA 96..272 155..316 165 28.2 Plus

RE41180.hyp Sequence

Translation from 382 to 1683

> RE41180.hyp
MGLNGRRRLLGCGLGFFCLIFCSYAAPASFEDVSISRGPKSSITIKEQSS
LQLPCDYQLPDGYLQKSSVILRWRKDSKTLRQVELGRMDSTTSEPQLETM
LREDSRVALSKDSGALQFTSVLASDAGQYQCQLVIDDSVAASSSSGVLLV
IEQLKFVPQPTSKNLELGTLSKVHCKAQGTPAPQVKWMRETQLPLPVNVT
DQNGTLIFNQVSNEQRGQYTCIASNSQGQITATVSINVVVAPKFSVPPEG
PIEVAEAGTAVIHCQAIGEPKPTIQWDKDLTYLNENNTDPERFSLMENGT
LEIRNVRPEDEGRYGCTIGSSAGLKREDVLLVLKSSKSASNSIVTRIIIV
IICLAFLYFVLVLGLKVWYRYRRHLGKVQLEDGHVNGPTDGQEHDHHENE
PCLTEANSSKNLKSKLRESTILEQESQVADDIV*

RE41180.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:29:22
Subject Length Description Subject Range Query Range Score Percent Strand
otk2-PA 433 CG8964-PA 1..433 1..433 2224 100 Plus
otk-PB 1019 CG8967-PB 246..665 25..431 1064 53.6 Plus
otk-PA 1033 CG8967-PA 246..665 25..431 1064 53.6 Plus
tutl-PH 1533 CG15427-PH 373..657 37..337 246 26.8 Plus
tutl-PE 902 CG15427-PE 350..632 39..337 244 26.7 Plus
tutl-PH 1533 CG15427-PH 209..451 113..323 188 22.9 Plus