BDGP Sequence Production Resources |
Search the DGRC for RE41410
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 414 |
Well: | 10 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG7264-RA |
Protein status: | RE41410.pep: gold |
Preliminary Size: | 1146 |
Sequenced Size: | 1716 |
Gene | Date | Evidence |
---|---|---|
CG7264 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7264 | 2002-03-21 | Blastp of sequenced clone |
CG7264 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7264 | 2008-04-29 | Release 5.5 accounting |
CG7264 | 2008-08-15 | Release 5.9 accounting |
CG7264 | 2008-12-18 | 5.12 accounting |
1716 bp (1716 high quality bases) assembled on 2002-03-21
GenBank Submission: AY094875
> RE41410.complete AGTTCGAACTTAAATTTCTTTGCCAAACACCTACGTATATGTACATATAT ATGGGCAATATGTACATTAGGTGATTATTTTATGGTCGCTTTAACGATTA TTGGAACCGTCAAGCGACTCGAGCTGCAAAAATTAAAGAATTCGATTGAC ATGAATATATATATATGTAAATAGTCTGTAACTAGTAGGTTACAGAGGTA GTAGTAGAGGCAAACAATAAACAAAGCACCCAGCAACCGGGCAAACAAAG TCAACTCAGGCATATATCCACATCCTACTAACAAGAAGAGACAGACATAT CGACCTCGAATACAGTTGAACATCTTTTATAACTAACTCCGGCACAATGA CGCTCAAAATCGGTATATGCACCAAGCAGGATCTCGACGAGGCGATGAAG CTGCAGAAGCGGGAGCAGTACGAAGATGAGCGGAAGCGGCGCATTTTTAA TGCCAAACAGCGTCTTTACGGGCTCGACCTAGAAATGCTGGATCGCCAAA TACTTGAGAAAAAGAAGCAGCGAACCGCCCAGATGGAGTGCGACAAGAAA TTTGAAGAACAGGAGCAGCTGCAGAAGCGTCTGATCCTGGCCCAGGAAAT GGAGTTGGAGAAAAAACAGCGTGTGGTGGACTCGGATCTTAACTATTATC GCTGCCGCTATCAGCGCAAGGAGCAGCGCCGCGAATTCGACCTAAATGAT CCGAATTTCTTGAAGAAGGCACGTCCAACAAGAGTCGCCGACAATGACAT TTCGCTGGGCGTGTCCAGTGCCCAGATCTTTCAAGGCGAGGACCTCTATA ACTCTGACAGAAAGCAGCGGCAGCGGGAGCAGCAAAGAGCCTGGCTGGAT CAGCAAGTGCAGGAGCGTAAGAGGGCGGAGGATGCTCGCAAGCAGGCCGA TAATGTGTTGATGGACAACGTTGGTTGCAGAGACAAGCATCTGCAGGAGA TGGCCAAGTCTGATCACCAGATGCGCAACCAAGTCATCCAGCGAGTGCGT CAGTTCAATATCAACATGGCCAAGCAGAAGCAATTGGACCGCGAAAGGGA AAAGCGTGAAAAGTACGAGGATGACATGGCCGAGATCTATAACATGCTCT CCAGCGATATGCTAACTGAAAATCCGGATGTGGCTCAATCGCGCACCGAT CCGAACAAGAAGATTGCCTTCATGTATCGCGGCATGACGCCCGAAGAACT TCGCGTGTTTCGTCTTGGACAAGATCAGCAGCTTCGTTTGTCTATTCAGC GCAAGACGGAGGCCCAGATGATGGACAAACAGTGGGAGCAATACTCCATT AATATGGACCGCACCCTGGTCCTTCACCAAATCGAGGATGATCGCCGACG TAAGGCGGAATTCGATGAGCTGATGCGGGCGAATTCCAAGTTGGCCGTGG AGCAGGATCGCCAGCGCAAGGAAGCCCTTGTGGGCCTAACCAATGCCGTC TCCGATGACTTTTACGATCAGTTCAACAAGAACTCACGTTAGTGGGATTG TATTGAAGTTCCCAACCAAGACGATTCGAGAATAATGAGCTGGATGCGAT TAGAAAGCTGCCTCACTTTCTTGTGCAGCAACTTTCCATAGGCGTCCAGA ACATTGTACTATTTTAAAAATACAATCTTTGTTGGGAATCTTCACGACGA AATTATAATGTTCATGTTGGAAACAAAGCATTTCAAATATTTAAAAATTT AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7264-RA | 1784 | CG7264-RA | 1..1713 | 1..1713 | 8550 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11820454..11821679 | 472..1697 | 6085 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 11820088..11820398 | 156..472 | 1385 | 96.5 | Plus |
chr3L | 24539361 | chr3L | 11819874..11820033 | 1..160 | 770 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11829616..11830857 | 472..1713 | 6210 | 100 | Plus |
3L | 28110227 | 3L | 11829244..11829560 | 156..472 | 1570 | 99.7 | Plus |
3L | 28110227 | 3L | 11829030..11829189 | 1..160 | 785 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11822716..11823957 | 472..1713 | 6210 | 100 | Plus |
3L | 28103327 | 3L | 11822344..11822660 | 156..472 | 1570 | 99.6 | Plus |
3L | 28103327 | 3L | 11822130..11822289 | 1..160 | 785 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
hopper2 | 1593 | hopper2 HOPPER2 1593bp | 1261..1322 | 162..224 | 123 | 68.3 | Plus |
Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 3028..3109 | 1266..1341 | 116 | 65.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11820093..11820398 | 161..472 | 96 | -> | Plus |
chr3L | 11819874..11820033 | 1..160 | 98 | -> | Plus |
chr3L | 11820455..11821663 | 473..1681 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7264-RA | 1..1146 | 347..1492 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7264-RA | 1..1146 | 347..1492 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7264-RA | 1..1146 | 347..1492 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7264-RA | 1..1146 | 347..1492 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7264-RA | 1..1146 | 347..1492 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7264-RA | 1..1700 | 1..1700 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7264-RA | 1..1700 | 1..1700 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7264-RA | 1..1700 | 1..1700 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7264-RA | 1..1700 | 1..1700 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7264-RA | 1..1700 | 1..1700 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11829030..11829189 | 1..160 | 99 | -> | Plus |
3L | 11829249..11829560 | 161..472 | 100 | -> | Plus |
3L | 11829617..11830844 | 473..1700 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11829030..11829189 | 1..160 | 99 | -> | Plus |
3L | 11829249..11829560 | 161..472 | 100 | -> | Plus |
3L | 11829617..11830844 | 473..1700 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11829030..11829189 | 1..160 | 99 | -> | Plus |
3L | 11829249..11829560 | 161..472 | 100 | -> | Plus |
3L | 11829617..11830844 | 473..1700 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11822130..11822289 | 1..160 | 99 | -> | Plus |
arm_3L | 11822349..11822660 | 161..472 | 100 | -> | Plus |
arm_3L | 11822717..11823944 | 473..1700 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11822349..11822660 | 161..472 | 100 | -> | Plus |
3L | 11822717..11823944 | 473..1700 | 100 | Plus | |
3L | 11822130..11822289 | 1..160 | 99 | -> | Plus |
Translation from 346 to 1491
> RE41410.pep MTLKIGICTKQDLDEAMKLQKREQYEDERKRRIFNAKQRLYGLDLEMLDR QILEKKKQRTAQMECDKKFEEQEQLQKRLILAQEMELEKKQRVVDSDLNY YRCRYQRKEQRREFDLNDPNFLKKARPTRVADNDISLGVSSAQIFQGEDL YNSDRKQRQREQQRAWLDQQVQERKRAEDARKQADNVLMDNVGCRDKHLQ EMAKSDHQMRNQVIQRVRQFNINMAKQKQLDREREKREKYEDDMAEIYNM LSSDMLTENPDVAQSRTDPNKKIAFMYRGMTPEELRVFRLGQDQQLRLSI QRKTEAQMMDKQWEQYSINMDRTLVLHQIEDDRRRKAEFDELMRANSKLA VEQDRQRKEALVGLTNAVSDDFYDQFNKNSR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25296-PA | 381 | GF25296-PA | 1..381 | 1..381 | 1698 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15535-PA | 381 | GG15535-PA | 1..381 | 1..381 | 1956 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14800-PA | 381 | GH14800-PA | 1..381 | 1..381 | 1463 | 73.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7264-PB | 381 | CG7264-PB | 1..381 | 1..381 | 1950 | 100 | Plus |
CG7264-PA | 381 | CG7264-PA | 1..381 | 1..381 | 1950 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11854-PA | 381 | GI11854-PA | 1..381 | 1..381 | 1436 | 75.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20726-PA | 381 | GL20726-PA | 1..381 | 1..381 | 1578 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20221-PA | 381 | GA20221-PA | 1..381 | 1..381 | 1585 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25302-PA | 381 | GM25302-PA | 1..381 | 1..381 | 1983 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14334-PA | 381 | GD14334-PA | 1..381 | 1..381 | 1974 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13552-PA | 381 | GJ13552-PA | 1..381 | 1..381 | 1476 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12760-PA | 381 | GK12760-PA | 1..381 | 1..381 | 1504 | 76.9 | Plus |
Dwil\GK25200-PA | 381 | GK25200-PA | 1..381 | 1..381 | 1245 | 62.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21855-PA | 381 | GE21855-PA | 1..381 | 1..381 | 1941 | 97.4 | Plus |
Translation from 346 to 1491
> RE41410.hyp MTLKIGICTKQDLDEAMKLQKREQYEDERKRRIFNAKQRLYGLDLEMLDR QILEKKKQRTAQMECDKKFEEQEQLQKRLILAQEMELEKKQRVVDSDLNY YRCRYQRKEQRREFDLNDPNFLKKARPTRVADNDISLGVSSAQIFQGEDL YNSDRKQRQREQQRAWLDQQVQERKRAEDARKQADNVLMDNVGCRDKHLQ EMAKSDHQMRNQVIQRVRQFNINMAKQKQLDREREKREKYEDDMAEIYNM LSSDMLTENPDVAQSRTDPNKKIAFMYRGMTPEELRVFRLGQDQQLRLSI QRKTEAQMMDKQWEQYSINMDRTLVLHQIEDDRRRKAEFDELMRANSKLA VEQDRQRKEALVGLTNAVSDDFYDQFNKNSR*