![]() | BDGP Sequence Production Resources |
Search the DGRC for RE41712
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 417 |
Well: | 12 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG5292-RA |
Protein status: | RE41712.pep: gold |
Preliminary Size: | 483 |
Sequenced Size: | 1203 |
Gene | Date | Evidence |
---|---|---|
CG5292 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5292 | 2002-01-03 | Blastp of sequenced clone |
CG5292 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5292 | 2008-04-29 | Release 5.5 accounting |
CG5292 | 2008-08-15 | Release 5.9 accounting |
CG5292 | 2008-12-18 | 5.12 accounting |
1203 bp (1203 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075489
> RE41712.complete AAAGTGCCGCCTGAGTGAGAGCTACCCATTGTTTTTGTTGACCTGGTCAT TTCATCTCATCTGTTTGCGGCTTTTCACCCAGTTCGCCCGAGTCTATTTC CATGCCAAATGGCCGCCTTCATGGAGGAAGCGTTAGTGGAGGCGAGGCGG GCACGTGACGCCGGCGAGGTGCCCGTGGGCTGTGTGTTCGTTCATGGGGA CAAGGTGGTCGCACGTGGCGGGAACGAGGTGAACGTCCACCGGAACGCCA CTCGCCACGCGGAATTCATTTGCATCGACGCTATCCTCGCCAGCTGCCGC GAGAGACGTCTGCCGGCCCGCCAGCTGTTCAGCGAGATCACCGTGGTGGT CACCGTGGAGCCCTGCATTATGTGCTCCGCCGCCCTGCACACTCTGGGCG TCAAGGAGATCATCTACGGCTGTGAGAACGATCGTTTCGGAGGAAAGACG GTCGTGGATGTGGCCGCCGTCGTTGGCCATAGGATCGAGATCACGGGCGG TGTGCGGGCGGATGAGGCGATGGCTCTGCTAAAGGATTTCTACAAGGGCG ACAATCCGGCGGCACCGCCACAGGCCAAGAAGAAAAAGTAGGATCAATTG TCGAGGCCAAAAGCGTGCGTGAAGAAGGGGAGCATGAATGGAGTCAACCA CTGATCCTCAAAGAAGTAGGAAGCTATTACAGTCATTGAAGTAATATTTA AAGTATGATAAAACTATAGAAAAATAGTAGAATGCAAAAGTCTACGTTTT CGTAAAATTCAATTACTTCCAAGCCTTCCAAAATCCGGAAACGAGCAGAT TACCGAAAATCCGAAGGCAAGCCTCTAGTTTACTCATTATTTCAGAGGGA ACAAGCCAAGAAACGTATTTATCTTATAAAAGGAATAGTATTCCGTCGAA ATCATCGTGAAATAGAGAACGAATTTCAAAAACGCAATCAGAAATGAAAG TAGTTAGAATACATAAAACTACAATCGCATAAAGAATGAAAACATTAGTG CTCCAGTCATCTGCATCCTGGAGGCATACATCCGAAAGTAAAATAAGTAC CACTGCATCATTCTTCGACGATTTCTGTATATGATTCAATTTATTATAAT CTTTAAGCATAGTCTAAGATATATTGTATATGGCGTTCAGAACGTATGTT TTAACTCTAAGCATAAATACAATTACTGCATGAAAAGAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5292-RA | 1479 | CG5292-RA | 138..1322 | 1..1185 | 5910 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 12976278..12976906 | 1..629 | 99 | -> | Plus |
chr3R | 12976963..12977519 | 630..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5292-RA | 1..483 | 109..591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5292-RA | 1..483 | 109..591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5292-RA | 1..483 | 109..591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5292-RA | 1..483 | 109..591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5292-RA | 1..483 | 109..591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5292-RA | 1..1186 | 1..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5292-RA | 1..1186 | 1..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5292-RA | 6..1191 | 1..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5292-RA | 1..1186 | 1..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5292-RA | 6..1191 | 1..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17151866..17152494 | 1..629 | 100 | -> | Plus |
3R | 17152551..17153107 | 630..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17151866..17152494 | 1..629 | 100 | -> | Plus |
3R | 17152551..17153107 | 630..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17151866..17152494 | 1..629 | 100 | -> | Plus |
3R | 17152551..17153107 | 630..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 12977588..12978216 | 1..629 | 100 | -> | Plus |
arm_3R | 12978273..12978829 | 630..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16892697..16893325 | 1..629 | 100 | -> | Plus |
3R | 16893382..16893938 | 630..1187 | 99 | Plus |
Translation from 108 to 590
> RE41712.hyp MAAFMEEALVEARRARDAGEVPVGCVFVHGDKVVARGGNEVNVHRNATRH AEFICIDAILASCRERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKE IIYGCENDRFGGKTVVDVAAVVGHRIEITGGVRADEAMALLKDFYKGDNP AAPPQAKKKK*
Translation from 108 to 590
> RE41712.pep MAAFMEEALVEARRARDAGEVPVGCVFVHGDKVVARGGNEVNVHRNATRH AEFICIDAILASCRERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKE IIYGCENDRFGGKTVVDVAAVVGHRIEITGGVRADEAMALLKDFYKGDNP AAPPQAKKKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18139-PA | 160 | GF18139-PA | 1..160 | 1..160 | 786 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22115-PA | 160 | GG22115-PA | 1..160 | 1..160 | 817 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13454-PA | 160 | GH13454-PA | 1..160 | 1..160 | 761 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5292-PB | 160 | CG5292-PB | 1..160 | 1..160 | 825 | 100 | Plus |
CG5292-PA | 160 | CG5292-PA | 1..160 | 1..160 | 825 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24773-PA | 160 | GI24773-PA | 1..160 | 1..160 | 767 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23678-PA | 160 | GL23678-PA | 1..160 | 1..160 | 726 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18791-PA | 160 | GA18791-PA | 1..160 | 1..160 | 725 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15219-PA | 160 | GM15219-PA | 1..160 | 1..160 | 813 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24425-PA | 160 | GJ24425-PA | 1..160 | 1..160 | 764 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11635-PA | 160 | GK11635-PA | 1..160 | 1..160 | 749 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10118-PA | 160 | GE10118-PA | 1..160 | 1..160 | 811 | 97.5 | Plus |