Clone RE41906 Report

Search the DGRC for RE41906

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:419
Well:6
Vector:pFlc-1
Associated Gene/TranscriptPtx1-RA
Protein status:RE41906.pep: gold
Preliminary Size:3422
Sequenced Size:3039

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1447 2002-01-01 Sim4 clustering to Release 2
CG1447 2003-01-01 Sim4 clustering to Release 3
CG1447 2003-08-07 Blastp of sequenced clone
Ptx1 2008-04-29 Release 5.5 accounting
Ptx1 2008-08-15 Release 5.9 accounting
Ptx1 2008-12-18 5.12 accounting

Clone Sequence Records

RE41906.complete Sequence

3039 bp (3039 high quality bases) assembled on 2005-08-22

GenBank Submission: BT009990

> RE41906.complete
AGTAGCCGCGAGTTCTCGTCGCCAGCACCACGTTTACCGTTAGCACTGGC
CCAACCACCCCGCACAACCCCACCAGCCAGATACTCGCTGCATGCGCTGT
ACAGTGTACACGCATCCAACAGATACTTTTCCGAATTCGTTTTCAATCCA
GCTACGTCCTGTTACGGATGCAGACGCGTCGCCTCCGTTGTGATACCAGA
TACATGTAATTGCAGGTCTAGAGCTACAGATTTAGATACAGAGATTCGAG
TACCCTAGCAGATACTTAGCCTAATTACGCCGTGGATTAAACTATTAAAC
ACTTAAATCCGCCAGGATTTGCCTATCAAATCAAATCGAATCGAAATCAT
ATCACTGAGAGTGCCGCGAGTGACTGTGTGCGCGAGTGTGTGTTTCTGTG
AAGCGGCAGCGAGATTAAAAACATATCCCCGAGTTACTTAAAATTAATCA
CTAACATAATCACTGTGATTTTTATTATTTGATCTGCCGACGTCAACACC
GCGTGTGCGAAAACTGTTTAACGGCTGGGGCTTTATTAAATGCCGCTTCG
CATTTGATTAGCAATCTGTTGCAACAACACAGCACAAACCTACCGATCTC
CCCGAGATTTATAGCCCACTGCCCACGCGATATATCCGGAAGATTTTCGG
AGACTTTCCCAGATCTCCGGCATTAGAAATGCTGGCCATCTGATTTATTG
ACGGACCCACGACATTTGCTCCATCAAAGTTCGCCTTTGATATTCGGGAT
CGACAGAACCAGAGAACCGACGGAAGTTCGTTCCCACCACCTAGTGGATT
AATTTTAATTCCTCTCCCATCATTCAGAGCTTTTCGGGCTCTGGCAACGG
CTGCATCTTGGATTTGCTTTCACCACAGTTGGAAGATACCGGCCTCAAGA
CGACGACTTTCCTGCAGCACTTCAAGGACGTCGTCACGACGAAGTTCACG
GGGAGGGACCACCACCTGCCGCCGCTGCACCCCGCACACCCCGCCCACCC
GGCGCACCAGCAGTCGGCGCTGCACCACCACCACCACCAGCAGCAGAGCT
TCTCCACCATTTTCCCCACGTATCTAGGCATGGACCGCTCCTCCGCCGTC
GGCGGTTGCGGCGGGGGCGGCGGTCTGGGAGTGGGCGTGGTCACCAGCTC
GGCCACGGCCTTGGGACCGGGTGGCCTGACCAACGGGGGCGGCGGAGTGG
TCAGTGGCGCACTCAACGGATTGGAGGCCATGTCGGCCGAGTCCACGGGT
CTGTGCCTGCAGGATCTGGTGAGTGCCGGGACGGCCAACGGAGCAGGCTC
CGCAGGATCGGCAGAGAGTGCCACCACCACCAGCACGGCACTGAGCAGCG
GCAGCACCGGAAGCTCCACGGTCAACGGAGGAGGCAGCAGCACCTCCGGC
ACGGAGCACCTGCACAGCCACCACAGCCTGCACGACTCCAGCTCGTCGGT
CAGCATCTCACCCGCCATCTCGAGCCTGATGCCCATCAGCAGCCTGAGCC
ACTTGCACCACTCCGCGGGCCAGGACCTGGTGGGTGGCTACTCCCAGCAC
CCGCATCACACGGTGGTGCCGCCGCACACGCCCAAGCACGAGCCGCTCGA
GAAACTCAGAATTTGGGCCGAAACCGGCGATTTCCGTGATAGTCATAGCT
CCATGACCGCCGTAGCAAATAGTTTGGATAGCACCCACTTGAACAACTTT
CAGACGTCATCGACATCCTCGATATCGAACCGGAGTCGGGATCGCAAAGA
TGGCAATCGCAGTGTAAACGAAACCACGATCAAGACAGAAAACATATCAA
GTTCCGGGCACGATGAGCCGATGACCACCAGTGGCGAGGAGCCGAAGAAC
GACAAGAAGAACAAGAGGCAGCGGCGCCAGAGGACACACTTCACCTCGCA
ACAGCTCCAGGAGCTGGAGCACACCTTCAGCCGGAACAGGTATCCGGACA
TGTCCACCCGCGAAGAGATCGCCATGTGGACCAATCTTACAGAGGCCCGC
GTCAGGGTGTGGTTCAAGAATCGGCGGGCCAAGTGGCGCAAGAGGGAGCG
GAACGCGATGAACGCGGCAGTGGCGGCGGCGGACTTTAAGTCCGGATTCG
GAACGCAGTTCATGCAGCCGTTCGCGGATGACTCGCTGTACAGCTCGTAT
CCGTATAACAACTGGACCAAGGTGCCCTCGCCGCTGGGAACCAAGCCCTT
TCCGTGGCCAGTGAACCCACTCGGATCGATGGTGGCCGGCAATCATCACC
AGAACTCGGTGAACTGCTTCAACACGGGCGCCAGTGGCGTGGCGGTCAGC
ATGAACAACGCATCCATGCTGCCGGGTTCGATGGGCTCGTCCTTGAGCAA
CACCAGCAACGTGGGAGCCGTGGGCGCCCCCTGTCCGTACACCACCCCCG
CCAATCCGTACATGTACCGCTCCGCCGCCGAGCCCTGCATGAGCAGCAGC
ATGAGCTCGAGCATTGCCACCCTGCGGCTGAAGGCTAAGCAGCACGCCTC
CGCCGGATTCGGCAGCCCCTACTCCGCCCCCTCCCCCGTGTCGAGGTCCA
ATTCCGCCGGACTCTCCGCCTGCCAGTACACCGGAGTGGGCGTGACGGAC
GTGGTCTGAGAAAACGCCCTGGGTGCGCTGCTCAACCAGCACCAGCACCA
CTTGCAGCACTTCTCGGGAGGATCGGTGGGCGGATCCGGGGTGCCGAATG
GGATGCAACAGCACTCCGGCAACATGCTGCATCACAGCAACTTGGGCCTG
GACCACTCCGATCTCGGTTTGGTTGGGGGAGGGCCGTCCAATCACCAGGA
CGAGGGCAACCACAGTCTGGAGGGCAGCAACAAGTCCCCCATGGAGGCGC
CCCTGGCCAACAGCAGCAACAACAACAACAACGACAACGATGACGAGGAC
GTGATCGATTGAAAAACGCTCTAACTTAAATCAAACTAAAGGCAGCCTAG
CCCTAAGCATTCATAAATAATTTTAGATGTTTGCCCAAACTAAAGATAAA
TAACATAAATGAAGCCCCTAACCAAAAAAAAAAAAAAAA

RE41906.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:31:06
Subject Length Description Subject Range Query Range Score Percent Strand
Ptx1.d 3578 Ptx1.d 21..3048 1..3028 15140 100 Plus
Ptx1-RA 3043 Ptx1-RA 21..3043 1..3023 15115 100 Plus
Ptx1.a 3589 Ptx1.a 21..1631 1..1611 8055 100 Plus
Ptx1.a 3589 Ptx1.a 1647..3063 1612..3028 7085 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:17:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 26751632..26752649 2006..3023 5030 99.6 Plus
chr3R 27901430 chr3R 26735260..26736088 1..829 4145 100 Plus
chr3R 27901430 chr3R 26738442..26739225 828..1611 3905 99.9 Plus
chr3R 27901430 chr3R 26746810..26747067 1752..2009 1290 100 Plus
chr3R 27901430 chr3R 26745916..26746057 1612..1753 710 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:56:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:17:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30929134..30930156 2006..3028 5115 100 Plus
3R 32079331 3R 30912756..30913584 1..829 4145 100 Plus
3R 32079331 3R 30915938..30916721 828..1611 3920 100 Plus
3R 32079331 3R 30924312..30924569 1752..2009 1290 100 Plus
3R 32079331 3R 30923418..30923559 1612..1753 710 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:21:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 30669965..30670987 2006..3028 5115 100 Plus
3R 31820162 3R 30653587..30654415 1..829 4145 100 Plus
3R 31820162 3R 30656769..30657552 828..1611 3920 100 Plus
3R 31820162 3R 30665143..30665400 1752..2009 1290 100 Plus
3R 31820162 3R 30664249..30664390 1612..1753 710 100 Plus
Blast to na_te.dros performed on 2019-03-15 20:17:47 has no hits.

RE41906.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:18:30 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 26735260..26736088 1..829 100 -> Plus
chr3R 26738444..26739225 830..1611 99 -> Plus
chr3R 26745916..26746056 1612..1752 100 -> Plus
chr3R 26746811..26747064 1753..2006 100 -> Plus
chr3R 26751633..26752649 2007..3023 96   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:06:58 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
Ptx1-RD 256..2040 823..2609 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:54:10 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
Ptx1-RD 256..2040 823..2609 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:10:42 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
Ptx1-RE 1..1833 1080..2912 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:19:37 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
Ptx1-RE 1..1833 1080..2912 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:06:56 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
Ptx1-RA 1..2891 133..3023 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:54:10 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
Ptx1-RA 1..2891 133..3023 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:10:42 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
Ptx1-RA 3..3025 1..3023 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:34:56 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
Ptx1-RA 1..2891 133..3023 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:19:37 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
Ptx1-RA 3..3025 1..3023 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:18:30 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30912756..30913584 1..829 100 -> Plus
3R 30915940..30916721 830..1611 100 -> Plus
3R 30923418..30923558 1612..1752 100 -> Plus
3R 30924313..30924566 1753..2006 100 -> Plus
3R 30929135..30930151 2007..3023 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:18:30 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30912756..30913584 1..829 100 -> Plus
3R 30915940..30916721 830..1611 100 -> Plus
3R 30923418..30923558 1612..1752 100 -> Plus
3R 30924313..30924566 1753..2006 100 -> Plus
3R 30929135..30930151 2007..3023 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:18:30 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30912756..30913584 1..829 100 -> Plus
3R 30915940..30916721 830..1611 100 -> Plus
3R 30923418..30923558 1612..1752 100 -> Plus
3R 30924313..30924566 1753..2006 100 -> Plus
3R 30929135..30930151 2007..3023 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:10:42 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26738478..26739306 1..829 100 -> Plus
arm_3R 26741662..26742443 830..1611 100 -> Plus
arm_3R 26749140..26749280 1612..1752 100 -> Plus
arm_3R 26750035..26750288 1753..2006 100 -> Plus
arm_3R 26754857..26755873 2007..3023 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:13:27 Download gff for RE41906.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30653587..30654415 1..829 100 -> Plus
3R 30656771..30657552 830..1611 100 -> Plus
3R 30664249..30664389 1612..1752 100 -> Plus
3R 30665144..30665397 1753..2006 100 -> Plus
3R 30669966..30670982 2007..3023 100   Plus

RE41906.pep Sequence

Translation from 1079 to 2608

> RE41906.pep
MDRSSAVGGCGGGGGLGVGVVTSSATALGPGGLTNGGGGVVSGALNGLEA
MSAESTGLCLQDLVSAGTANGAGSAGSAESATTTSTALSSGSTGSSTVNG
GGSSTSGTEHLHSHHSLHDSSSSVSISPAISSLMPISSLSHLHHSAGQDL
VGGYSQHPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSHSSMTAVANSLD
STHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTT
SGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMW
TNLTEARVRVWFKNRRAKWRKRERNAMNAAVAAADFKSGFGTQFMQPFAD
DSLYSSYPYNNWTKVPSPLGTKPFPWPVNPLGSMVAGNHHQNSVNCFNTG
ASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAPCPYTTPANPYMYRSAA
EPCMSSSMSSSIATLRLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQY
TGVGVTDVV*

RE41906.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:21:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22931-PA 605 GF22931-PA 95..605 1..509 2582 96.3 Plus
Dana\GF15246-PA 589 GF15246-PA 50..112 262..324 252 66.7 Plus
Dana\GF20646-PA 405 GF20646-PA 79..142 261..324 250 65.6 Plus
Dana\GF12058-PA 217 GF12058-PA 83..174 236..327 242 53.3 Plus
Dana\GF15026-PA 325 GF15026-PA 2..65 261..324 235 60.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:21:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11784-PA 597 GG11784-PA 1..508 1..508 2678 99.8 Plus
Dere\GG24714-PA 416 GG24714-PA 88..151 261..324 248 65.6 Plus
Dere\GG22067-PA 898 GG22067-PA 504..613 220..324 241 42.7 Plus
Dere\GG24732-PA 352 GG24732-PA 2..65 261..324 239 60.9 Plus
Dere\GG19984-PA 219 GG19984-PA 83..174 236..327 237 52.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:21:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14222-PA 499 GH14222-PA 11..499 18..509 2061 91 Plus
Dgri\GH11036-PA 372 GH11036-PA 2..85 261..350 257 51.1 Plus
Dgri\GH11236-PA 372 GH11236-PA 2..85 261..350 256 51.1 Plus
Dgri\GH11220-PA 376 GH11220-PA 67..130 261..324 250 65.6 Plus
Dgri\GH20193-PA 219 GH20193-PA 87..176 238..327 232 51.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:35
Subject Length Description Subject Range Query Range Score Percent Strand
Ptx1-PE 610 CG1447-PE 1..509 1..509 2658 100 Plus
Ptx1-PA 509 CG1447-PA 1..509 1..509 2658 100 Plus
Ptx1-PC 514 CG1447-PC 1..514 1..509 2641 98.8 Plus
Vsx1-PB 837 CG4136-PB 207..455 3..324 272 29.2 Plus
Vsx1-PA 837 CG4136-PA 207..455 3..324 272 29.2 Plus
al-PA 408 CG3935-PA 59..145 240..324 235 52.9 Plus
PHDP-PA 220 CG11182-PA 34..175 194..327 233 42.4 Plus
Rx-PB 904 CG10052-PB 454..620 138..325 232 33 Plus
hbn-PA 409 CG33152-PA 3..213 105..324 227 30.8 Plus
Drgx-PF 587 CG34340-PF 50..112 262..324 226 66.7 Plus
Drgx-PE 587 CG34340-PE 50..112 262..324 226 66.7 Plus
toe-PA 640 CG10704-PA 101..573 4..488 224 25.3 Plus
otp-PI 367 CG10036-PI 85..279 241..436 222 32.2 Plus
otp-PE 409 CG10036-PE 85..321 241..436 221 30.5 Plus
otp-PJ 374 CG10036-PJ 93..286 240..436 220 31.7 Plus
gsb-n-PA 449 CG2692-PA 132..239 211..321 220 48.7 Plus
otp-PK 416 CG10036-PK 93..328 240..436 219 30.1 Plus
otp-PC 271 CG10036-PC 10..183 260..436 217 34.6 Plus
otp-PF 313 CG10036-PF 10..225 260..436 216 32.4 Plus
CG32532-PD 688 CG32532-PD 252..630 7..380 215 26.6 Plus
CG11294-PB 261 CG11294-PB 22..84 262..324 214 63.5 Plus
CG11294-PA 261 CG11294-PA 22..84 262..324 214 63.5 Plus
CG32532-PB 354 CG32532-PB 49..300 101..380 214 30.2 Plus
CG32532-PC 358 CG32532-PC 49..300 101..380 214 30.2 Plus
otp-PG 264 CG10036-PG 6..176 264..436 213 33.7 Plus
otp-PH 306 CG10036-PH 6..218 264..436 212 31.6 Plus
gsb-PA 427 CG3388-PA 134..404 211..494 211 28.1 Plus
eyg-PC 670 CG10488-PC 245..466 152..389 211 31.7 Plus
eyg-PB 670 CG10488-PB 245..466 152..389 211 31.7 Plus
eyg-PA 670 CG10488-PA 245..466 152..389 211 31.7 Plus
Pph13-PA 357 CG2819-PA 8..70 262..324 210 61.9 Plus
Vsx2-PA 640 CG33980-PA 51..490 83..497 210 23.7 Plus
Vsx2-PB 645 CG33980-PB 51..447 83..480 210 22.6 Plus
prd-PA 590 CG6716-PA 172..260 245..334 209 50 Plus
prd-PB 613 CG6716-PB 195..283 245..334 209 50 Plus
ey-PA 838 CG1464-PA 171..560 34..441 208 26 Plus
ey-PC 857 CG1464-PC 190..579 34..441 208 26 Plus
ey-PD 898 CG1464-PD 231..620 34..441 208 26 Plus
Gsc-PC 415 CG2851-PC 280..342 262..324 205 58.7 Plus
Gsc-PD 473 CG2851-PD 338..400 262..324 205 58.7 Plus
repo-PA 612 CG31240-PA 291..363 251..323 205 52.1 Plus
B-H2-PA 645 CG5488-PA 204..485 109..373 205 24.1 Plus
toy-PA 543 CG11186-PA 172..517 174..497 203 25.4 Plus
CG34367-PC 420 CG34367-PC 46..411 96..475 201 26.5 Plus
oc-PE 539 CG12154-PE 62..350 262..505 200 27 Plus
oc-PD 542 CG12154-PD 65..353 262..505 200 27 Plus
oc-PG 542 CG12154-PG 65..353 262..505 200 27 Plus
oc-PC 542 CG12154-PC 65..353 262..505 200 27 Plus
oc-PF 548 CG12154-PF 71..359 262..505 200 27 Plus
CG34367-PB 297 CG34367-PB 43..288 231..475 199 30.4 Plus
CG9876-PA 275 CG9876-PA 95..178 243..325 197 50 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:21:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22129-PA 603 GI22129-PA 148..603 46..509 2023 92.7 Plus
Dmoj\GI21624-PA 397 GI21624-PA 69..193 261..366 253 42.4 Plus
Dmoj\GI23866-PA 623 GI23866-PA 67..129 262..324 252 66.7 Plus
Dmoj\GI21809-PA 392 GI21809-PA 2..84 261..350 241 47.8 Plus
Dmoj\GI20720-PA 216 GI20720-PA 105..173 257..327 229 63.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:21:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13525-PA 589 GL13525-PA 95..589 1..509 2120 92.4 Plus
Dper\GL18872-PA 397 GL18872-PA 80..143 261..324 249 65.6 Plus
Dper\GL18665-PA 370 GL18665-PA 50..112 262..324 242 66.7 Plus
Dper\GL18888-PA 376 GL18888-PA 2..65 261..324 240 60.9 Plus
Dper\GL10922-PA 216 GL10922-PA 109..173 263..327 228 64.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:21:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13007-PA 588 GA13007-PA 94..588 1..509 2119 92.4 Plus
Dpse\GA17785-PA 395 GA17785-PA 80..143 261..324 249 65.6 Plus
Dpse\GA15474-PA 376 GA15474-PA 2..65 261..324 240 60.9 Plus
Dpse\GA10035-PA 921 GA10035-PA 499..621 207..324 240 39.8 Plus
Dpse\GA10822-PA 216 GA10822-PA 109..173 263..327 228 64.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:21:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12914-PA 621 GM12914-PA 1..538 1..508 2618 93.9 Plus
Dsec\GM16736-PA 410 GM16736-PA 82..145 261..324 251 65.6 Plus
Dsec\GM15784-PA 895 GM15784-PA 501..610 220..324 243 42.7 Plus
Dsec\GM15498-PA 220 GM15498-PA 76..175 228..327 240 50 Plus
Dsec\GM16755-PA 348 GM16755-PA 2..65 261..324 239 60.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:21:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21552-PA 592 GD21552-PA 1..508 1..508 2675 99.8 Plus
Dsim\GD23020-PA 410 GD23020-PA 82..145 261..324 251 65.6 Plus
Dsim\GD25001-PA 220 GD25001-PA 76..175 228..327 240 50 Plus
Dsim\GD23036-PA 355 GD23036-PA 7..70 261..324 239 60.9 Plus
Dsim\GD11547-PA 903 GD11547-PA 513..618 224..324 237 43.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:21:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24250-PA 709 GJ24250-PA 116..599 20..507 2011 90.7 Plus
Dvir\GJ17771-PA 381 GJ17771-PA 69..193 261..366 253 42.4 Plus
Dvir\GJ17788-PA 378 GJ17788-PA 2..86 261..350 240 48.9 Plus
Dvir\GJ17468-PA 881 GJ17468-PA 498..603 224..324 240 43.4 Plus
Dvir\GJ20457-PA 216 GJ20457-PA 83..173 236..327 231 54.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:21:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14162-PA 751 GK14162-PA 135..618 20..504 2030 92.6 Plus
Dwil\GK23788-PA 375 GK23788-PA 43..190 240..366 259 38.5 Plus
Dwil\GK23335-PA 937 GK23335-PA 550..655 224..324 241 43.4 Plus
Dwil\GK24418-PA 364 GK24418-PA 3..65 262..324 235 61.9 Plus
Dwil\GK22873-PA 395 GK22873-PA 133..201 257..324 233 58 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:21:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10911-PA 717 GE10911-PA 122..629 1..508 2666 99.8 Plus
Dyak\GE16769-PA 410 GE16769-PA 82..145 261..324 251 65.6 Plus
Dyak\GE12148-PA 906 GE12148-PA 512..621 220..324 242 42.7 Plus
Dyak\GE11517-PA 219 GE11517-PA 75..174 228..327 238 50 Plus
Dyak\GE16946-PA 353 GE16946-PA 2..65 261..324 238 60.9 Plus

RE41906.hyp Sequence

Translation from 1079 to 2608

> RE41906.hyp
MDRSSAVGGCGGGGGLGVGVVTSSATALGPGGLTNGGGGVVSGALNGLEA
MSAESTGLCLQDLVSAGTANGAGSAGSAESATTTSTALSSGSTGSSTVNG
GGSSTSGTEHLHSHHSLHDSSSSVSISPAISSLMPISSLSHLHHSAGQDL
VGGYSQHPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSHSSMTAVANSLD
STHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTT
SGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMW
TNLTEARVRVWFKNRRAKWRKRERNAMNAAVAAADFKSGFGTQFMQPFAD
DSLYSSYPYNNWTKVPSPLGTKPFPWPVNPLGSMVAGNHHQNSVNCFNTG
ASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAPCPYTTPANPYMYRSAA
EPCMSSSMSSSIATLRLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQY
TGVGVTDVV*

RE41906.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:24:42
Subject Length Description Subject Range Query Range Score Percent Strand
Ptx1-PE 610 CG1447-PE 1..509 1..509 2658 100 Plus
Ptx1-PA 509 CG1447-PA 1..509 1..509 2658 100 Plus
Ptx1-PC 514 CG1447-PC 1..514 1..509 2641 98.8 Plus
Vsx1-PB 837 CG4136-PB 207..455 3..324 272 29.2 Plus
Vsx1-PA 837 CG4136-PA 207..455 3..324 272 29.2 Plus