Clone RE42354 Report

Search the DGRC for RE42354

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:423
Well:54
Vector:pFlc-1
Associated Gene/TranscriptNc73EF-RF
Protein status:RE42354.pep: gold
Preliminary Size:3506
Sequenced Size:3721

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11661 2004-03-31 Blastp of sequenced clone
Nc73EF 2008-04-29 Release 5.5 accounting
Nc73EF 2008-08-15 Release 5.9 accounting
Nc73EF 2008-12-18 5.12 accounting

Clone Sequence Records

RE42354.complete Sequence

3721 bp (3721 high quality bases) assembled on 2004-03-31

GenBank Submission: BT012466

> RE42354.complete
ACTAACGCAAAAGTTTTCGGCTGTAAAAACTTCTATTTTGTAAAGCTACA
AAATGCATAGAGCCCACACAGCCTTCAGCCTGGCCTTGTCGCCGATGGCG
CACAAGAACTTCGCCACATGGCTGCTCAAGAGCAGCAGCAGTCAGCAGAT
GGCCAAGGTAACTGCAGCGGCCGCTGTGCGCACCTACAACTCCGCAGCTG
CCGAACCTTTTGCCAACGGCAGCACCGCCTCCTACGTGGAGGAGATGTAC
AACGCCTGGCTTCGGGATCCCACTTCCGTGCACACCTCCTGGGACGCGTA
CTTCCGCAGCAACAGCTACGTTAGCCCGCCCAACTTGGCGCCCGTGCAGG
CCAACACTCTGCCGCTGACCGCCTTCAACTTTGGAGGAGCCGTCGCCGGC
GCTGCGCCCGACTCCAAGACCATTGACGACCATCTGGCCGTCCAGGCCAT
CATCAGGAGCTACCAGTCACGAGGTCATTTGGCATCTGATCTGGATCCGC
TTGGAATTTTGACTCGCGAAAAAACCGTCTGCAAGGATGGGCTAGCACGT
CGTGCTAACGAAGATGTGCTCAGGCAGCACTCTGGGTTTTTGTTTGGCGA
GCAGGACATGGATCGCCAGTTCAAGCTGCCCAGCACTACCTTCATCGGAG
GCGATGAGGCTTCGTTGCCCCTAAAGGAAATCCTGAACCGCCTGGAGAAT
GTCTACTGTAATAAGATTGGCGTGGAGTTCATGTTCATCAACTCTCTGGA
GCAATGCAACTGGATCCGCAAGCGTTTTGAGACCCCCGGCGTCCTTAACT
TCTCGCCCGAGGAGAAGCGTCTGATCCTGGCCCGTTTGACCCGTGCCACC
GGCTTTGAGGCTTTCCTGGCCAAGAAGTACTCTTCTGAGAAACGTTTCGG
TCTGGAGGGTTGCGAGATCATGATCCCAGCCCTGAAGGAGATCATCGACG
TATCAACGGAGTTGGGAGTGGAGTCGGTCATCATGGGCATGCCCCATCGT
GGACGTCTTAACACCTTGGCCAATGTATGCCGCAAGCCCTTGAACCAGAT
CTTCACCCAGTTCGCTGGACTGGAGGCTGCTGATGATGGCTCTGGTGATG
TCAAGTACCATCTCGGTACATACATCGAGCGATTGAACCGCGTTACAAAC
AAGAACATCCGCCTGGCTGTCGTGGCCAACCCGTCCCATCTGGAGGCTGT
GGATCCCGTGGTGCAGGGCAAGACCCGTGCCGAGCAGTTCTACCGTGGCG
ACCAGGAGGGCAAGAAGGTTATGTCCATTTTGATCCACGGTGATGCCGCC
TTCTGCGGACAGGGCGTCGTCTATGAAACTATGCATCTTTCGGACCTGCC
CGACTACACCACCCACGGAACTATCCATGTGGTGGCCAACAACCAGATCG
GTTTCACCACCGATCCCCGTTTCTCGAGGTCCTCTCCCTACTGTACGGAT
GTGGCTCGTGTCGTCAATGCTCCTATTTTCCACGTCAACGCTGACGATCC
AGAGGCCGTGATGCATGTGTGCAAGGTGGCTGCTGAGTGGCGTGCTACTT
TCCACAAGGATTGTGTTATTGATTTGGTCGGATACCGCCGCAATGGACAC
AACGAGATCGACGAGCCCATGTTCACGCAACCCTTGATGTACCAGAAGAT
CCGCAAGCACAAGAACTGTCTCGACCTGTATGCCGACAAACTGATCGCCG
AGGGCACTGTCACCGCCGAGGAGGTTAAGTCGGTTGCCGCTAAATACGAG
AACATTTGCGAGGAGGCATTCGCTCTGGCCAAGACCGAGACCCACGTCAA
GTACAAGGACTGGCTCGACTCGCCCTGGTCCGGCTTTTTCGAGGGCAAAG
ACCCATTGAAGGTAGCGCCCACTGGAGTGAAGGAGGAGACCCTCATCCAC
ATCGGCAACCGCTTCTCGTCGCCACCACCGAACGCTGCTGAATTCGTGAT
TCACAAGGGTCTATTGCGAGTGTTGGCCGCTCGCAAGGCAATGGTGGACG
AAAAGGTCGCTGATTGGGCTTTGGGAGAGGCCATGGCCTTCGGCTCTCTG
CTGAAGGAGGGAATCCATGTGCGCCTTTCGGGACAGGATGTCGAGCGTGG
TACCTTCTCGCATCGCCACCATGTGCTGCACCACCAGCTGGTCGACAAGG
CCACTTACAACTCGCTGCAGCACATGTACCCAGATCAGGCGCCCTACTCC
GTCTCCAACAGCTCGCTGTCGGAGTACGCAGTGCTTGGTTTCGAGCACGG
TTACTCGATGACCAATCCCAATGCCCTGGTGCTGTGGGAGGCTCAGTTCG
GAGACTTCAGCAACACGGCCCAGTCGATCATCGATCAGTTCATCTCCAGC
GGTCAGTCAAAGTGGGTGCGCCAATCGGGTCTGGTAATGCTCCTGCCCCA
CGGCATGGAAGGCATGGGCCCCGAGCACTCCTCGTGCCGCGTGGAGCGCT
TCCTGCAAATGAGCAGTGACGATCCCGACTACTTCCCACCAGAGTCCGAT
GAGTTCGGAGTGCGACAGCTGCACGACATTAACTGGATCGTGGCAAACTG
CTCGACGCCCGCCAACTACTACCACATCCTGCGCCGACAGATCGCATTGC
CTTTCCGCAAGCCCCTGATTCTGTGCACGCCCAAATCGCTGCTGCGTCAC
CCCGAGGCTAAGAGTCCTTTCAGCGAGATGAGCGAGGGCAGCGAGTTCCA
GCGCATCATCCCCGACAACGGTCCCGCCGGCCAGAATCCCAGCAATGTGA
AGAAGGTCGTCTTCTGCTCGGGCCGCGTCTACTACGATTTGACCAAGACA
CGTAGGGAAAAGCAGCTGGAGGGCGAAATCGCCATTGTGCGCGTGGAGCA
GATCTCTCCCTTCCCCTTCGATCTGGTCAAGGAGCAGGCCAACCTGTACA
AGAATGCCGAACTCGTGTGGGCCCAAGAGGAGCACAAGAACCAGGGCAGC
TGGACCTATGTGCAACCTCGTTTCCTCACCGCCTTGAACCACAGCCGCGA
CGTCAGCTACGTCGGACGCGCCTGCGGAGCCTCCACCGCCACCGGATCCA
AGGCCCAGCACATCCGTGAGCTGAATGCGCTGCTCAACGACGCGATTTCG
ACCTAAGGAGATGGGTCTTGATGAAGATGAGATTGGGATGAAGATGGAGA
TGGAGACGATGAATATTAATTACGATTATATTTTGTATTGAAACGTATGC
AGACTCTTTGATACGATTTTTTGCTGACGAAATTGTTAAGAGCATTGTGT
GAAAGTAATGAAATGTTAAATATTAGTTTAGTGAAATTACAAGAGCTAAC
GGCAACCAAGTAACAAATAACACGAAATGTTAAGTGTTTAGTAAAGAATC
AAACAAAACGAAAAAGAACTACAACCACTCACAGCAAGTCTTTAATACAA
ACTAAAGAGCCAAGATCTAGTAAATAGCCAACTAACCTATGCGCATACAT
TTGAAGTGATGAGAACTCGCATAGGAGGAGGATATCACTATACTTTCGGA
ATGAATAAAACCCTTTATAATCTTATTTCTTATTCCTATGTTTAATATTT
ATTTTATTGTAATATATATAACTAAACTATCTCAAGCCACGCGAAGTTTT
GACACCCTTTATCGATCGCAGGCCAAGAAATCATTAGTGTTTTTGTTTGC
CTAAGTTACACATTTTTGTTTAAATAAATGAACAAGTATAATACTTAACA
ATGACAAAAAAAAAAAAAAAA

RE42354.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:02:36
Subject Length Description Subject Range Query Range Score Percent Strand
Nc73EF-RF 4057 Nc73EF-RF 142..3849 1..3708 18540 100 Plus
Nc73EF.e 4277 Nc73EF.e 150..3827 31..3708 18390 100 Plus
Nc73EF-RH 3748 Nc73EF-RH 74..3748 31..3705 18375 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:12:02
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 16953312..16954206 1957..2851 4475 100 Plus
chr3L 24539361 chr3L 16952385..16953254 1088..1957 4290 99.5 Plus
chr3L 24539361 chr3L 16956821..16957522 3004..3705 3510 100 Plus
chr3L 24539361 chr3L 16951918..16952330 676..1088 2065 100 Plus
chr3L 24539361 chr3L 1606754..1607242 1991..2479 900 78.9 Plus
chr3L 24539361 chr3L 16949147..16949326 287..466 870 98.9 Plus
chr3L 24539361 chr3L 16954263..16954420 2849..3006 790 100 Plus
chr3L 24539361 chr3L 16948738..16948879 145..286 710 100 Plus
chr3L 24539361 chr3L 16949978..16950110 465..597 665 100 Plus
chr3L 24539361 chr3L 16948556..16948673 31..148 590 100 Plus
chr3L 24539361 chr3L 16951776..16951856 596..676 405 100 Plus
chr3L 24539361 chr3L 1605916..1606155 1267..1506 390 77.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:56:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:12:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16963870..16964764 1957..2851 4475 100 Plus
3L 28110227 3L 16962943..16963812 1088..1957 4350 100 Plus
3L 28110227 3L 16967379..16968083 3004..3708 3525 100 Plus
3L 28110227 3L 16962476..16962888 676..1088 2065 100 Plus
3L 28110227 3L 1607204..1607692 1991..2479 915 79.1 Plus
3L 28110227 3L 16959705..16959884 287..466 900 100 Plus
3L 28110227 3L 16964821..16964978 2849..3006 790 100 Plus
3L 28110227 3L 16959281..16959422 145..286 710 100 Plus
3L 28110227 3L 16960536..16960668 465..597 665 100 Plus
3L 28110227 3L 16959099..16959216 31..148 590 100 Plus
3L 28110227 3L 16962334..16962414 596..676 405 100 Plus
3L 28110227 3L 1606366..1606605 1267..1506 390 77.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 16956970..16957864 1957..2851 4475 100 Plus
3L 28103327 3L 16956043..16956912 1088..1957 4350 100 Plus
3L 28103327 3L 16960479..16961183 3004..3708 3525 100 Plus
3L 28103327 3L 16955576..16955988 676..1088 2065 100 Plus
3L 28103327 3L 1607204..1607692 1991..2479 915 79.1 Plus
3L 28103327 3L 16952805..16952984 287..466 900 100 Plus
3L 28103327 3L 16957921..16958078 2849..3006 790 100 Plus
3L 28103327 3L 16952381..16952522 145..286 710 100 Plus
3L 28103327 3L 16953636..16953768 465..597 665 100 Plus
3L 28103327 3L 16952199..16952316 31..148 590 100 Plus
3L 28103327 3L 16955434..16955514 596..676 405 100 Plus
3L 28103327 3L 1606366..1606605 1267..1506 390 77.5 Plus
3L 28103327 3L 16948613..16948642 1..30 150 100 Plus
3L 28103327 3L 1608198..1608256 2916..2974 145 83 Plus
Blast to na_te.dros performed 2019-03-16 21:12:00
Subject Length Description Subject Range Query Range Score Percent Strand
copia 5143 copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). 1940..2008 3693..3625 120 63.8 Minus

RE42354.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:12:56 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 16949147..16949326 287..466 98 -> Plus
chr3L 16949980..16950109 467..596 100 -> Plus
chr3L 16951777..16951855 597..675 100 -> Plus
chr3L 16944965..16944994 1..30 100 -> Plus
chr3L 16948556..16948673 31..148 100 -> Plus
chr3L 16948742..16948879 149..286 100 -> Plus
chr3L 16951918..16952329 676..1087 100 -> Plus
chr3L 16952385..16953253 1088..1956 99 -> Plus
chr3L 16953312..16954206 1957..2851 100 -> Plus
chr3L 16954266..16954420 2852..3006 100 -> Plus
chr3L 16956824..16957522 3007..3705 95   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:18:41 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
Nc73EF-RF 1..3054 53..3106 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:37:56 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
Nc73EF-RF 1..3054 53..3106 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:35:10 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
Nc73EF-RH 1..3054 53..3106 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:21:44 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
Nc73EF-RF 1..3054 53..3106 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:10:38 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
Nc73EF-RH 1..3054 53..3106 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:18:40 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
Nc73EF-RF 9..3713 1..3705 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:37:55 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
Nc73EF-RF 9..3713 1..3705 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:35:10 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
Nc73EF-RF 9..3713 1..3705 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:21:44 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
Nc73EF-RF 9..3713 1..3705 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:10:38 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
Nc73EF-RF 14..3718 1..3705 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:12:56 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16960538..16960667 467..596 100 -> Plus
3L 16962335..16962413 597..675 100 -> Plus
3L 16959705..16959884 287..466 100 -> Plus
3L 16955513..16955542 1..30 100 -> Plus
3L 16959099..16959216 31..148 100 -> Plus
3L 16959285..16959422 149..286 100 -> Plus
3L 16962476..16962887 676..1087 100 -> Plus
3L 16962943..16963811 1088..1956 100 -> Plus
3L 16963870..16964764 1957..2851 100 -> Plus
3L 16964824..16964978 2852..3006 100 -> Plus
3L 16967382..16968080 3007..3705 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:12:56 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16960538..16960667 467..596 100 -> Plus
3L 16962335..16962413 597..675 100 -> Plus
3L 16959705..16959884 287..466 100 -> Plus
3L 16955513..16955542 1..30 100 -> Plus
3L 16959099..16959216 31..148 100 -> Plus
3L 16959285..16959422 149..286 100 -> Plus
3L 16962476..16962887 676..1087 100 -> Plus
3L 16962943..16963811 1088..1956 100 -> Plus
3L 16963870..16964764 1957..2851 100 -> Plus
3L 16964824..16964978 2852..3006 100 -> Plus
3L 16967382..16968080 3007..3705 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:12:56 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16960538..16960667 467..596 100 -> Plus
3L 16962335..16962413 597..675 100 -> Plus
3L 16959705..16959884 287..466 100 -> Plus
3L 16955513..16955542 1..30 100 -> Plus
3L 16959099..16959216 31..148 100 -> Plus
3L 16959285..16959422 149..286 100 -> Plus
3L 16962476..16962887 676..1087 100 -> Plus
3L 16962943..16963811 1088..1956 100 -> Plus
3L 16963870..16964764 1957..2851 100 -> Plus
3L 16964824..16964978 2852..3006 100 -> Plus
3L 16967382..16968080 3007..3705 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:35:10 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16948613..16948642 1..30 100 -> Plus
arm_3L 16952199..16952316 31..148 100 -> Plus
arm_3L 16952385..16952522 149..286 100 -> Plus
arm_3L 16952805..16952984 287..466 100 -> Plus
arm_3L 16953638..16953767 467..596 100 -> Plus
arm_3L 16955435..16955513 597..675 100 -> Plus
arm_3L 16955576..16955987 676..1087 100 -> Plus
arm_3L 16956043..16956911 1088..1956 100 -> Plus
arm_3L 16956970..16957864 1957..2851 100 -> Plus
arm_3L 16957924..16958078 2852..3006 100 -> Plus
arm_3L 16960482..16961180 3007..3705 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:59:08 Download gff for RE42354.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16955576..16955987 676..1087 100 -> Plus
3L 16956043..16956911 1088..1956 100 -> Plus
3L 16956970..16957864 1957..2851 100 -> Plus
3L 16957924..16958078 2852..3006 100 -> Plus
3L 16960482..16961180 3007..3705 100   Plus
3L 16948613..16948642 1..30 100 -> Plus
3L 16952199..16952316 31..148 100 -> Plus
3L 16952385..16952522 149..286 100 -> Plus
3L 16952805..16952984 287..466 100 -> Plus
3L 16953638..16953767 467..596 100 -> Plus
3L 16955435..16955513 597..675 100 -> Plus

RE42354.pep Sequence

Translation from 52 to 3105

> RE42354.pep
MHRAHTAFSLALSPMAHKNFATWLLKSSSSQQMAKVTAAAAVRTYNSAAA
EPFANGSTASYVEEMYNAWLRDPTSVHTSWDAYFRSNSYVSPPNLAPVQA
NTLPLTAFNFGGAVAGAAPDSKTIDDHLAVQAIIRSYQSRGHLASDLDPL
GILTREKTVCKDGLARRANEDVLRQHSGFLFGEQDMDRQFKLPSTTFIGG
DEASLPLKEILNRLENVYCNKIGVEFMFINSLEQCNWIRKRFETPGVLNF
SPEEKRLILARLTRATGFEAFLAKKYSSEKRFGLEGCEIMIPALKEIIDV
STELGVESVIMGMPHRGRLNTLANVCRKPLNQIFTQFAGLEAADDGSGDV
KYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGD
QEGKKVMSILIHGDAAFCGQGVVYETMHLSDLPDYTTHGTIHVVANNQIG
FTTDPRFSRSSPYCTDVARVVNAPIFHVNADDPEAVMHVCKVAAEWRATF
HKDCVIDLVGYRRNGHNEIDEPMFTQPLMYQKIRKHKNCLDLYADKLIAE
GTVTAEEVKSVAAKYENICEEAFALAKTETHVKYKDWLDSPWSGFFEGKD
PLKVAPTGVKEETLIHIGNRFSSPPPNAAEFVIHKGLLRVLAARKAMVDE
KVADWALGEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQLVDKA
TYNSLQHMYPDQAPYSVSNSSLSEYAVLGFEHGYSMTNPNALVLWEAQFG
DFSNTAQSIIDQFISSGQSKWVRQSGLVMLLPHGMEGMGPEHSSCRVERF
LQMSSDDPDYFPPESDEFGVRQLHDINWIVANCSTPANYYHILRRQIALP
FRKPLILCTPKSLLRHPEAKSPFSEMSEGSEFQRIIPDNGPAGQNPSNVK
KVVFCSGRVYYDLTKTRREKQLEGEIAIVRVEQISPFPFDLVKEQANLYK
NAELVWAQEEHKNQGSWTYVQPRFLTALNHSRDVSYVGRACGASTATGSK
AQHIRELNALLNDAIST*

RE42354.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:26:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23946-PA 1117 GF23946-PA 1..984 1..984 5257 98.3 Plus
Dana\GF10423-PA 1173 GF10423-PA 39..1023 32..1011 3181 59.5 Plus
Dana\GF18418-PA 920 GF18418-PA 60..914 134..1011 1445 35.9 Plus
Dana\GF13932-PA 179 GF13932-PA 1..98 227..344 397 66.9 Plus
Dana\GF23405-PA 950 GF23405-PA 42..145 208..344 389 61.3 Plus
Dana\GF23946-PA 1117 GF23946-PA 1082..1117 982..1017 170 91.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:26:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13594-PA 1113 GG13594-PA 1..1002 1..1003 5345 98 Plus
Dere\GG14806-PA 1229 GG14806-PA 26..1031 35..1012 3366 62 Plus
Dere\GG11794-PA 919 GG11794-PA 56..913 130..1011 1426 35.8 Plus
Dere\GG13594-PA 1113 GG13594-PA 1078..1113 982..1017 176 94.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:26:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16325-PA 1016 GH16325-PA 1..1016 1..1017 5336 95.8 Plus
Dgri\GH16621-PA 989 GH16621-PA 26..982 26..978 3144 60.8 Plus
Dgri\GH13978-PA 924 GH13978-PA 126..918 214..1011 1448 38.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:24:09
Subject Length Description Subject Range Query Range Score Percent Strand
Nc73EF-PF 1017 CG11661-PF 1..1017 1..1017 5344 100 Plus
Nc73EF-PH 1017 CG11661-PH 1..1017 1..1017 5344 100 Plus
Nc73EF-PA 1008 CG11661-PA 1..1008 1..1017 5153 97.1 Plus
Nc73EF-PB 1008 CG11661-PB 1..1008 1..1017 5153 97.1 Plus
Nc73EF-PC 1008 CG11661-PC 1..1008 1..1017 5153 97.1 Plus
Nc73EF-PG 1008 CG11661-PG 1..1008 1..1017 5153 97.1 Plus
Nc73EF-PJ 1105 CG11661-PJ 1..993 1..1003 4995 95.6 Plus
Nc73EF-PI 1105 CG11661-PI 1..993 1..1003 4995 95.6 Plus
CG33791-PF 1241 CG33791-PF 27..1030 36..1011 3298 63.2 Plus
CG33791-PE 1241 CG33791-PE 27..1030 36..1011 3298 63.2 Plus
CG33791-PC 1238 CG33791-PC 27..1030 36..1011 3298 63.2 Plus
CG33791-PA 1238 CG33791-PA 27..1030 36..1011 3298 63.2 Plus
CG33791-PB 1282 CG33791-PB 27..1052 36..1011 3266 61.8 Plus
CG33791-PD 1282 CG33791-PD 27..1052 36..1011 3266 61.8 Plus
CG1544-PA 919 CG1544-PA 56..913 130..1011 1400 35 Plus
Nc73EF-PJ 1105 CG11661-PJ 1070..1105 982..1017 171 94.4 Plus
Nc73EF-PI 1105 CG11661-PI 1070..1105 982..1017 171 94.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:26:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13269-PA 1110 GI13269-PA 1..984 1..985 5223 96.8 Plus
Dmoj\GI12468-PA 1169 GI12468-PA 13..1000 30..1011 3299 61.3 Plus
Dmoj\GI22321-PA 924 GI22321-PA 125..918 214..1011 1458 38.4 Plus
Dmoj\GI13269-PA 1110 GI13269-PA 1075..1110 982..1017 171 91.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:26:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20804-PA 1307 GL20804-PA 208..1223 14..1011 3380 60.9 Plus
Dper\GL13542-PA 923 GL13542-PA 59..917 130..1011 1411 35.6 Plus
Dper\GL20863-PA 69 GL20863-PA 34..68 982..1016 149 85.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:26:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11127-PA 1116 GA11127-PA 1..986 1..985 5143 96.2 Plus
Dpse\GA16827-PA 1448 GA16827-PA 349..1364 14..1011 3383 60.9 Plus
Dpse\GA13730-PA 923 GA13730-PA 59..917 130..1011 1405 35.8 Plus
Dpse\GA13730-PB 738 GA13730-PB 1..732 272..1011 1321 38.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:26:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25677-PA 1111 GM25677-PA 1..997 1..997 5351 98.5 Plus
Dsec\GM14428-PA 1237 GM14428-PA 27..1030 36..1011 3377 63 Plus
Dsec\GM12925-PA 919 GM12925-PA 56..913 130..1011 1408 35.3 Plus
Dsec\GM25677-PA 1111 GM25677-PA 1076..1111 982..1017 176 94.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:26:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14681-PA 1112 GD14681-PA 1..1002 1..1003 5359 98.3 Plus
Dsim\GD17620-PA 1000 GD17620-PA 27..993 36..978 3227 62.4 Plus
Dsim\GD21563-PA 906 GD21563-PA 56..900 130..1011 1361 34.5 Plus
Dsim\GD14681-PA 1112 GD14681-PA 1077..1112 982..1017 176 94.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:26:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12039-PA 1115 GJ12039-PA 1..984 1..985 5227 96.6 Plus
Dvir\GJ12370-PA 1235 GJ12370-PA 48..1018 50..1011 3367 63.3 Plus
Dvir\GJ10508-PA 926 GJ10508-PA 128..920 214..1011 1491 39 Plus
Dvir\GJ12039-PA 1115 GJ12039-PA 1080..1115 982..1017 172 91.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:26:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17139-PA 1115 GK17139-PA 1..985 1..985 5280 97.4 Plus
Dwil\GK20459-PA 1182 GK20459-PA 49..1039 46..1011 3390 62.9 Plus
Dwil\GK22616-PA 922 GK22616-PA 95..916 186..1011 1443 37 Plus
Dwil\GK17139-PA 1115 GK17139-PA 1080..1115 982..1017 176 94.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:26:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19891-PA 1113 GE19891-PA 1..1002 1..1003 5338 98 Plus
Dyak\GE21169-PA 1217 GE21169-PA 27..1030 36..1011 3347 62 Plus
Dyak\GE10922-PA 919 GE10922-PA 56..913 130..1011 1428 35.2 Plus
Dyak\GE19891-PA 1113 GE19891-PA 1078..1113 982..1017 176 94.4 Plus

RE42354.hyp Sequence

Translation from 52 to 3105

> RE42354.hyp
MHRAHTAFSLALSPMAHKNFATWLLKSSSSQQMAKVTAAAAVRTYNSAAA
EPFANGSTASYVEEMYNAWLRDPTSVHTSWDAYFRSNSYVSPPNLAPVQA
NTLPLTAFNFGGAVAGAAPDSKTIDDHLAVQAIIRSYQSRGHLASDLDPL
GILTREKTVCKDGLARRANEDVLRQHSGFLFGEQDMDRQFKLPSTTFIGG
DEASLPLKEILNRLENVYCNKIGVEFMFINSLEQCNWIRKRFETPGVLNF
SPEEKRLILARLTRATGFEAFLAKKYSSEKRFGLEGCEIMIPALKEIIDV
STELGVESVIMGMPHRGRLNTLANVCRKPLNQIFTQFAGLEAADDGSGDV
KYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGD
QEGKKVMSILIHGDAAFCGQGVVYETMHLSDLPDYTTHGTIHVVANNQIG
FTTDPRFSRSSPYCTDVARVVNAPIFHVNADDPEAVMHVCKVAAEWRATF
HKDCVIDLVGYRRNGHNEIDEPMFTQPLMYQKIRKHKNCLDLYADKLIAE
GTVTAEEVKSVAAKYENICEEAFALAKTETHVKYKDWLDSPWSGFFEGKD
PLKVAPTGVKEETLIHIGNRFSSPPPNAAEFVIHKGLLRVLAARKAMVDE
KVADWALGEAMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHHQLVDKA
TYNSLQHMYPDQAPYSVSNSSLSEYAVLGFEHGYSMTNPNALVLWEAQFG
DFSNTAQSIIDQFISSGQSKWVRQSGLVMLLPHGMEGMGPEHSSCRVERF
LQMSSDDPDYFPPESDEFGVRQLHDINWIVANCSTPANYYHILRRQIALP
FRKPLILCTPKSLLRHPEAKSPFSEMSEGSEFQRIIPDNGPAGQNPSNVK
KVVFCSGRVYYDLTKTRREKQLEGEIAIVRVEQISPFPFDLVKEQANLYK
NAELVWAQEEHKNQGSWTYVQPRFLTALNHSRDVSYVGRACGASTATGSK
AQHIRELNALLNDAIST*

RE42354.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:42:53
Subject Length Description Subject Range Query Range Score Percent Strand
Nc73EF-PF 1017 CG11661-PF 1..1017 1..1017 5344 100 Plus
Nc73EF-PH 1017 CG11661-PH 1..1017 1..1017 5344 100 Plus
Nc73EF-PA 1008 CG11661-PA 1..1008 1..1017 5153 97.1 Plus
Nc73EF-PB 1008 CG11661-PB 1..1008 1..1017 5153 97.1 Plus
Nc73EF-PC 1008 CG11661-PC 1..1008 1..1017 5153 97.1 Plus