Clone RE42418 Report

Search the DGRC for RE42418

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:424
Well:18
Vector:pFlc-1
Associated Gene/TranscriptR-RA
Protein status:RE42418.pep: gold
Sequenced Size:2751

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13936 2002-01-01 Sim4 clustering to Release 2
CG1956 2002-06-10 Blastp of sequenced clone
CG1956 2003-01-01 Sim4 clustering to Release 3
R 2008-04-29 Release 5.5 accounting
R 2008-08-15 Release 5.9 accounting
R 2008-12-18 5.12 accounting

Clone Sequence Records

RE42418.complete Sequence

2751 bp (2751 high quality bases) assembled on 2002-06-10

GenBank Submission: AY121688

> RE42418.complete
ATCGATGCTTTGGCAGCCCTAGTCTTTGAGTGTTCGCTGTTCGCTGAGGG
CGAAAAAGTAAAGAAATTACAAGGCAAACTAGTGTTAAATTAAAAGTGAA
GCGATTCGCGAGCGGCGACAGGTGAAGCGGTCCCCAAGGAGCAAGCAGTT
GGCGGCAGCGAGTGAAAAGCATAGTGTGCTCTCGGTAGCAGTGACGGCCG
TCTCGAGGAACAGTCAAGCCAGGATATTTCCGCTCAAAAAAGCAACAATT
GAACGCACGCAACTCGGCGGAAGGAGCGAGCGAGAGAGGGAGCACAAACA
CCATCACACATTCACACACACTAACACACACACACTCACGCAGTCACTTA
CACGGCACAAAGGTTATCAACAGCAAAAGCAACAACAACAAACAATTTAC
TTTAAATATAAAACATATATTAACTAATAAGCAAGAGCAACAAAAAAAAA
CAAAAACAAAAAACAACTGCAACCGACAAGCAATCGCCGAACAACGCCTA
AAAACAAGTGATTTTCGAGGGAGAGCCACCTGGAAAGTGAACCCACCTAC
CTGGCCTACCTGCATTTTGGGTCTCTTCCCTAGAATTTAGCACAAAACAA
GAGATATACGAAGGATATACAAACAGCACAGCAGCCAGCATGCGTGAGTA
CAAAATCGTGGTCCTTGGAAGCGGCGGCGTGGGCAAATCCGCGCTGACAG
TCCAGTTTGTCCAGTGCATCTTCGTGGAGAAGTACGATCCCACCATCGAG
GACAGTTACAGGAAGCAGGTGGAGGTGGACGGACAGCAGTGCATGCTGGA
GATCCTGGACACGGCGGGTACGGAGCAGTTCACGGCCATGCGGGATTTGT
ACATGAAGAACGGCCAGGGATTCGTGCTGGTCTACTCGATCACGGCGCAA
TCGACGTTTAACGATCTGCAGGACCTGCGCGAGCAGATACTCCGGGTGAA
GGACACGGACGATGTGCCCATGGTGCTCGTGGGCAACAAGTGCGACCTCG
AAGAGGAGCGCGTCGTCGGCAAGGAGCTGGGCAAGAACCTGGCCACCCAG
TTCAACTGCGCCTTCATGGAGACCTCAGCCAAAGCCAAAGTGAATGTGAA
CGATATTTTCTACGACCTGGTCCGGCAGATCAACAAGAAGTCGCCCGAGA
AGAAACAGAAGAAGCCGAAAAAGTCCCTATGTGTTCTGCTATAAGACTTC
CAAAAACCACCAAAACTAAAAAAACAAAAAAAAAAATATATAACAGAGGA
GGAGGAGAGAGGAGCAAAAGTATAAGCGTAAAGTAAAGAATTTTCAAATT
TTTTTCGTTCTCGTTTCGTTTTGGATCCGATGGCAATTGTCGAATTGAAA
TAACCAATCTACTATATACAAGCAAAACTTAAACTGACAAATGTTTTTAA
CTGTTTCAAGTTTTTGTAATTATTACCATTTACTACTATTATGATTGTAC
TATTTTTCGCTGATTAACCATTAATTCATATGGGGAATTATTATATATAT
ATATCTACATATTTAAATATATTTGTCGTTCGTTTTTGAGCCGTTTTTTA
AATTATGCAACAAGTGAAACATTCGTAAACTAAAACATTCGTATTTATTG
ATTCTTTTCGATTGTACTCTACACATCTACAACTACAACTACTTATACAC
GCGAAAGCCCAACCAACAACAAGTATATCTTTAAATAGAACCGAAAACAA
CATTCGAAACACAAATCAAATTAAGCTAAACTAAATTGTACGCCTAAAAG
ATAAAGATAACAAATTCCACGAGAGAAATGAGCAAATAAATCGAGAAAGG
AAATGAATCATGAATAAGGAACATATTTTATAAAAATATTGTATGCAAAT
GATGTCAAAATGTTGCAAACAACCAGAAGTAATGAGCCCCCTCCCCCTTA
GAAATTAGTTTAAAACAAATTTACAATTAATTGTTTACCACGATCAGTTG
CATCAAATCTGAACCCCCCCCCCCAAACACACACATACCAGCCACATCCC
ACACACACACACACACATTCGCAACCAGAACTCACACACACAAACACACC
TACACATTTCCGGCGCGCTCTCAGAGAGCGAAAAAGCTACACGAAAACGG
AAGCGGAATCGAGACAAGAGGCTCCTGCGGCCAAGGCTCATTTCCGCTTC
CTGGTAAAAAGAAGAGGAGCAGGAAGTGCAGAGAGAGCCACAAATTCTAG
AATATTTAATACATAAGAAATGGTTTAACACAAACTAAACTGTCGTGTCA
ATCCCAAAATGAAAAGAAACCTAAAAACGAAGTAATTTACAAATATTTCA
TAATAAACATTGCATAAACTTCGCGTACGAGTAGTAACCAATATGCCCTT
AAATCAAAGTCTAAACACAGCCAACAACCAACATTAAAAGTAAACTAAAT
AAAACCTAAGCCCAAGCGTATATATTAAATATATGATAAAGATACAAATC
ATTTTTGAACATAATAAACAACAAACAAACCAACCGTTACAATAACATAA
TGTAATAATGAGCGTGTGAAAAATGTAATTGAAAAACCATTTTTTCGAAC
TTGTTTCCCTACTGGTCGCGTTTTTGGGACCCCACACAGAGCCTCTGATC
TCAGAATCCTGGCAGTCCCGAATTCGCGACGCAGTAGGTCGACATGATCG
AGCATCTTTTAATTATTAATAAATGTATTATGTTTATAAAAAATTAAAAA
GGAAATGCAAAAACAAAATAAAAATTAAATAAATTCAAAAAAAAAAAAAA
A

RE42418.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
Roughened-RA 2816 Roughened-RA 71..2807 1..2737 13685 100 Plus
Ras85D-RA 2176 Ras85D-RA 625..859 649..883 320 75.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:18:28
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 1858672..1861240 2736..173 12630 99.8 Minus
chr3L 24539361 chr3L 1861623..1861796 174..1 870 100 Minus
chr3R 27901430 chr3R 5337987..5338110 772..649 200 77.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:56:21 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:18:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1859114..1861678 2737..173 12825 100 Minus
3L 28110227 3L 1862061..1862234 174..1 870 100 Minus
3R 32079331 3R 9512159..9512282 772..649 200 77.4 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:23:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 1859114..1861678 2737..173 12825 100 Minus
3L 28103327 3L 1862061..1862234 174..1 870 100 Minus
3R 31820162 3R 9252990..9253113 772..649 200 77.4 Minus
3R 31820162 3R 9252723..9252816 883..790 170 78.7 Minus
Blast to na_te.dros performed 2019-03-15 20:18:26
Subject Length Description Subject Range Query Range Score Percent Strand
rover 7318 rover ROVER 7318bp 605..985 2172..2536 167 54.8 Plus
Dkoe\Gandalf 979 Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). 749..958 2410..2186 162 57.5 Minus
rover 7318 rover ROVER 7318bp 787..1081 2202..2479 148 57 Plus
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 1118..1189 453..384 148 69.4 Minus
rover 7318 rover ROVER 7318bp 646..834 2348..2536 142 59.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2301..2408 284..395 135 64 Plus
Dmir\worf 4174 Dmir\worf WORF 4174bp Derived from AY144572. 3231..3274 1820..1863 130 77.3 Plus
roo 9092 roo DM_ROO 9092bp 1048..1225 287..465 126 57.6 Plus
Dbuz\Osvaldo 9045 Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). 5702..5934 2264..2497 124 57.1 Plus
blood 7410 blood BLOOD 7410bp 6722..6789 2250..2317 124 64.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2852..2987 259..391 121 61.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2321..2476 236..390 118 58.8 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3281..3394 346..461 116 59.3 Plus

RE42418.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:19:37 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 1859441..1861059 354..1972 97 == Minus
chr3L 1861121..1861238 175..292 100 <- Minus
chr3L 1861623..1861796 1..174 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:16:34 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
R-RA 1..555 640..1194 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:26:14 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
R-RB 1..555 640..1194 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:10:49 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
R-RA 1..555 640..1194 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:16:40 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
R-RA 1..555 640..1194 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:19:45 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
R-RA 1..555 640..1194 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:54:28 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
R-RA 1..2736 1..2736 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:26:13 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
R-RA 23..2758 1..2736 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:10:49 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
R-RA 6..2741 1..2736 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:16:41 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
R-RA 1..2736 1..2736 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:19:45 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
R-RA 6..2741 1..2736 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:19:37 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1859115..1861676 175..2736 100 <- Minus
3L 1862061..1862234 1..174 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:19:37 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1859115..1861676 175..2736 100 <- Minus
3L 1862061..1862234 1..174 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:19:37 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1859115..1861676 175..2736 100 <- Minus
3L 1862061..1862234 1..174 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:10:49 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1859115..1861676 175..2736 100 <- Minus
arm_3L 1862061..1862234 1..174 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:50:00 Download gff for RE42418.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1859115..1861676 175..2736 100 <- Minus
3L 1862061..1862234 1..174 100   Minus

RE42418.pep Sequence

Translation from 639 to 1193

> RE42418.pep
MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQ
CMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQI
LRVKDTDDVPMVLVGNKCDLEEERVVGKELGKNLATQFNCAFMETSAKAK
VNVNDIFYDLVRQINKKSPEKKQKKPKKSLCVLL*

RE42418.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:16:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24954-PA 184 GF24954-PA 1..184 1..184 959 99.5 Plus
Dana\GF13570-PA 257 GF13570-PA 50..220 1..171 487 51.5 Plus
Dana\GF11365-PA 182 GF11365-PA 1..182 1..184 477 56 Plus
Dana\GF16057-PA 189 GF16057-PA 1..189 1..184 477 53.2 Plus
Dana\GF22303-PA 235 GF22303-PA 12..178 4..170 449 49.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:16:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14553-PA 184 GG14553-PA 1..184 1..184 963 100 Plus
Dere\GG22302-PA 264 GG22302-PA 57..227 1..171 484 50.9 Plus
Dere\GG22932-PA 182 GG22932-PA 1..182 1..184 477 56 Plus
Dere\GG17366-PA 189 GG17366-PA 1..189 1..184 477 53.2 Plus
Dere\GG18572-PA 235 GG18572-PA 12..178 4..170 441 49.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:16:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15039-PA 184 GH15039-PA 1..184 1..184 949 98.4 Plus
Dgri\GH20176-PA 182 GH20176-PA 1..182 1..184 488 56 Plus
Dgri\GH19819-PA 265 GH19819-PA 60..230 1..171 485 51.5 Plus
Dgri\GH19394-PA 189 GH19394-PA 1..189 1..184 475 53.2 Plus
Dgri\GH24739-PA 234 GH24739-PA 12..178 4..170 438 48.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:56
Subject Length Description Subject Range Query Range Score Percent Strand
Rap1-PC 184 CG1956-PC 1..184 1..184 939 100 Plus
Rap1-PB 184 CG1956-PB 1..184 1..184 939 100 Plus
Rap1-PA 184 CG1956-PA 1..184 1..184 939 100 Plus
Rap2l-PA 182 CG3204-PA 1..182 1..184 523 56 Plus
Ras85D-PA 189 CG9375-PA 1..182 1..178 515 54.1 Plus
Ric-PB 264 CG8418-PB 57..227 1..171 468 50.9 Plus
Ric-PA 264 CG8418-PA 57..227 1..171 468 50.9 Plus
Ras64B-PA 192 CG1167-PA 3..192 1..184 464 47.9 Plus
Rala-PB 197 CG2849-PB 12..197 4..184 451 47.3 Plus
Rala-PC 201 CG2849-PC 12..201 4..184 439 45.8 Plus
Rala-PA 201 CG2849-PA 12..201 4..184 439 45.8 Plus
CG8500-PB 233 CG8500-PB 18..201 3..178 355 41.3 Plus
CG8500-PA 233 CG8500-PA 18..201 3..178 355 41.3 Plus
Rheb-PB 182 CG1081-PB 4..176 2..174 345 41.6 Plus
Rheb-PA 182 CG1081-PA 4..176 2..174 345 41.6 Plus
CG13375-PC 277 CG13375-PC 19..183 4..163 285 38.8 Plus
CG13375-PB 306 CG13375-PB 48..212 4..163 285 38.8 Plus
CG13375-PA 306 CG13375-PA 48..212 4..163 285 38.8 Plus
Rab8-PC 207 CG8287-PC 9..178 4..173 280 33.9 Plus
Rab8-PA 207 CG8287-PA 9..178 4..173 280 33.9 Plus
Rab3-PB 220 CG7576-PB 22..194 4..176 278 34.5 Plus
Rab3-PA 220 CG7576-PA 22..194 4..176 278 34.5 Plus
Rab9Fb-PA 214 CG32670-PA 8..161 4..157 272 40.6 Plus
Rab2-PB 213 CG3269-PB 7..173 4..170 271 36.9 Plus
Rab2-PA 213 CG3269-PA 7..173 4..170 271 36.9 Plus
CG8641-PB 434 CG8641-PB 167..337 4..160 269 36.3 Plus
CG8641-PA 434 CG8641-PA 167..337 4..160 269 36.3 Plus
Rab10-PA 204 CG17060-PA 10..188 4..182 265 31.7 Plus
Rab1-PA 205 CG3320-PA 12..175 4..167 265 34.5 Plus
Rab23-PA 268 CG2108-PA 39..190 5..157 264 35.1 Plus
Rab18-PA 197 CG3129-PA 4..165 2..164 262 36 Plus
Rab19-PB 219 CG7062-PP3-RB 22..187 4..167 261 36.5 Plus
Rab19-PA 219 CG7062-PA 22..187 4..167 261 36.5 Plus
Rab30-PD 223 CG9100-PD 8..167 4..164 258 37 Plus
Rab30-PC 223 CG9100-PC 8..167 4..164 258 37 Plus
Rab30-PB 223 CG9100-PB 8..167 4..164 258 37 Plus
Rab30-PA 223 CG9100-PA 8..167 4..164 258 37 Plus
Rap2l-PD 116 CG3204-PD 1..116 67..184 253 44.1 Plus
Rap2l-PC 116 CG3204-PC 1..116 67..184 253 44.1 Plus
RabX4-PA 213 CG31118-PA 9..191 4..179 251 32.6 Plus
Rab35-PB 201 CG9575-PB 9..182 4..174 250 33.5 Plus
Rab35-PD 201 CG9575-PD 9..182 4..174 250 33.5 Plus
Rab35-PA 201 CG9575-PA 9..182 4..174 250 33.5 Plus
Rab26-PE 410 CG34410-PE 214..381 5..170 245 36.1 Plus
Rab26-PD 410 CG34410-PD 214..381 5..170 245 36.1 Plus
Rab26-PC 410 CG34410-PC 214..381 5..170 245 36.1 Plus
Rab8-PB 172 CG8287-PB 4..143 33..173 240 36.2 Plus
RabX2-PA 195 CG2885-PA 8..168 4..164 240 37 Plus
Rab21-PC 222 CG17515-PC 14..185 4..170 239 31.8 Plus
Rab21-PD 222 CG17515-PD 14..185 4..170 239 31.8 Plus
Rab5-PI 219 CG3664-PI 29..199 3..173 237 33.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:16:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16691-PA 184 GI16691-PA 1..184 1..184 949 98.4 Plus
Dmoj\GI20407-PA 267 GI20407-PA 60..230 1..171 488 51.5 Plus
Dmoj\GI20698-PA 182 GI20698-PA 1..182 1..184 486 57.1 Plus
Dmoj\GI22599-PA 181 GI22599-PA 1..181 1..184 468 52.6 Plus
Dmoj\GI14784-PA 234 GI14784-PA 12..178 4..170 443 49.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:16:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24820-PA 133 GL24820-PA 1..133 52..184 684 98.5 Plus
Dper\GL19979-PA 262 GL19979-PA 57..227 1..171 484 50.9 Plus
Dper\GL11660-PA 182 GL11660-PA 1..182 1..184 477 56 Plus
Dper\GL22227-PA 189 GL22227-PA 1..189 1..184 471 53.2 Plus
Dper\GL12826-PA 174 GL12826-PA 11..170 16..175 423 49.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:16:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15150-PA 184 GA15150-PA 1..184 1..184 953 98.9 Plus
Dpse\GA21063-PA 262 GA21063-PA 57..227 1..171 484 50.9 Plus
Dpse\GA24803-PA 182 GA24803-PA 1..182 1..184 477 56 Plus
Dpse\GA21740-PA 189 GA21740-PA 1..189 1..184 471 53.2 Plus
Dpse\GA15484-PA 201 GA15484-PA 12..178 4..170 440 49.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:16:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14161-PA 184 GM14161-PA 1..184 1..184 963 100 Plus
Dsec\GM20091-PA 264 GM20091-PA 57..227 1..171 484 50.9 Plus
Dsec\GM18299-PA 182 GM18299-PA 1..182 1..184 477 56 Plus
Dsec\GM26252-PA 189 GM26252-PA 1..189 1..184 477 53.2 Plus
Dsec\GM12716-PA 235 GM12716-PA 12..178 4..170 441 49.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:16:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\R-PA 184 GD13432-PA 1..184 1..184 963 100 Plus
Dsim\GD25569-PA 264 GD25569-PA 57..227 1..171 484 50.9 Plus
Dsim\GD11831-PA 182 GD11831-PA 1..182 1..184 477 56 Plus
Dsim\Ras85D-PA 189 GD20791-PA 1..189 1..184 477 53.2 Plus
Dsim\GD16321-PA 235 GD16321-PA 12..178 4..170 441 49.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:16:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12943-PA 184 GJ12943-PA 1..184 1..184 949 98.4 Plus
Dvir\GJ20446-PA 182 GJ20446-PA 1..182 1..184 485 57.1 Plus
Dvir\GJ20079-PA 267 GJ20079-PA 60..230 1..171 485 50.9 Plus
Dvir\Ras1-PA 189 GJ23844-PA 1..189 1..184 476 53.2 Plus
Dvir\GJ18826-PA 234 GJ18826-PA 12..178 4..170 443 49.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:16:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20561-PA 184 GK20561-PA 1..184 1..184 953 98.9 Plus
Dwil\GK13838-PA 189 GK13838-PA 1..189 1..184 473 53.2 Plus
Dwil\GK21923-PA 159 GK21923-PA 1..156 1..156 448 59.6 Plus
Dwil\GK24932-PA 235 GK24932-PA 12..178 4..170 443 49.1 Plus
Dwil\GK12838-PA 192 GK12838-PA 3..168 1..166 427 52.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:16:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20907-PA 184 GE20907-PA 1..184 1..184 963 100 Plus
Dyak\GE14098-PA 264 GE14098-PA 57..227 1..171 484 50.9 Plus
Dyak\GE14369-PA 182 GE14369-PA 1..182 1..184 477 56 Plus
Dyak\GE24771-PA 189 GE24771-PA 1..189 1..184 477 53.2 Plus
Dyak\GE16885-PA 235 GE16885-PA 12..178 4..170 441 49.1 Plus

RE42418.hyp Sequence

Translation from 639 to 1193

> RE42418.hyp
MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQ
CMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQI
LRVKDTDDVPMVLVGNKCDLEEERVVGKELGKNLATQFNCAFMETSAKAK
VNVNDIFYDLVRQINKKSPEKKQKKPKKSLCVLL*

RE42418.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:19:00
Subject Length Description Subject Range Query Range Score Percent Strand
R-PC 184 CG1956-PC 1..184 1..184 939 100 Plus
R-PB 184 CG1956-PB 1..184 1..184 939 100 Plus
R-PA 184 CG1956-PA 1..184 1..184 939 100 Plus
Rap2l-PA 182 CG3204-PA 1..182 1..184 523 56 Plus
Ras85D-PA 189 CG9375-PA 1..182 1..178 515 54.1 Plus