Clone RE42507 Report

Search the DGRC for RE42507

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:425
Well:7
Vector:pFlc-1
Associated Gene/Transcriptstumps-RC
Protein status:RE42507.pep: gold
Sequenced Size:4693

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG18485 2002-01-01 Sim4 clustering to Release 2
stumps 2008-04-29 Release 5.5 accounting
stumps 2008-08-15 Release 5.9 accounting
stumps 2008-12-18 5.12 accounting

Clone Sequence Records

RE42507.complete Sequence

4693 bp (4693 high quality bases) assembled on 2006-02-24

GenBank Submission: BT024930

> RE42507.complete
GTTTTGGCTTTGGCGTGGATCGGATCGGATCGGTTGGCCATAGTCTCCCC
GAATATACAAGCCAATATACGTGTGTATTTTATACTGTGCCGAGTGCAGC
GGAAAAACTGAACCAAAAAAAAGTCGAGAAAAGTGCTCGTGACTGGAATT
CCGTATTTGTTTACCATTGTGTGTTTGTGTTTCCATTGCTATTTGTGTTT
CTGTTGCTCTGGAAAAGGGAAAACAATCGAGATTGGATCAACAAGATTAG
CGCGCCACCTAGCGGTCGGATTGGCTCTCCATCCTACAAATGTGTCCAAA
ACTTTGACGTATCCGCCGGAAGCACCTTAACTGGCTATAACAAGTGCAAA
GCCCAGCAGGTGAAGAGCTCCACCAAAATCGAAGAGGTTTGGGGGGGCAG
AAAAAAAACAGAGACCCCACCGAAGACTTTTCCAGCAATTATTAAACGGA
AGGAATCGTAATGTCTGTGGACAACCCGTATTACTTTTGCAATGAAACCA
AGTCGCCGCGCACCCCGGACTCGCAGTCCTCCAGCCGGGGATTCTCGATC
TTCAAGCGGCGCAACTCGAAGGGCAGCAGCCCCCGGCCGCTGGTGATGAC
CAATCCGGAACAGATGCGACTGATCACATCCGCCAATCTGGATACCACGG
CTACCATGGCATTAGGAAGTCCGCGGGGCAGCTTCAATTCCCTCGCCGGC
TATCCGCAACACGCGATTGAACTGCAGACGATGAACATGTACCGCCAGCG
ATCTGCAAATTCGCACTCAGAGTTCCGGGAACGCCTGAATTCTTGCAACG
AGACCCACAGCTCCCAGTGTCCCGGAGGAGGAGGTGCATCCGTAGCTGGG
GATCACGACGAGGTCTTCAATCCGCTGACATCGCCAACAAGTAGCAAATC
GCATCGACATCACACCCTGCCAAGTGGCGGAACTCGTCGCCATTCCCTGG
GAAACTGGGCCCAACATCAGCATCAACAGCAACATCAACAGAACTCTGGA
GCAATGGGACTGGGATCTCCGGATGAGGTGCCCAGCATGATGGCGCCTCG
ACCGCCGCTCCTCTCGCCAAACAAATTCCGCGGCAGTTCCCATCGACGAA
GAGACAACTGCGGCAACGTGAACAACACGAGTGGATCGAGTGCATCCGGA
TTCCTGGGCTCTCCCGGCTACAACATGGACGACATCCTGATCATCACCGC
CAAGCACAGCGAGCGCGCCTATTTGAGGGCCACTTTCCTGAAGAACCACT
TCGACAAGATCACCAAACAGCGCGGACGGAAACCATTCAATTTTCTGCAC
ATCAAAATTGACGATGGTCCCTTCAGCGAGGAGATTGCCCACAAGTATCA
GAACACAGCTTTGCAGATTGTGATCCTCTGTCCCGCACTTTTGGCCCTTC
CTCACAGCTTTCTGATGACCCAGCTATCGGCCATTATTCGCGTGGAAAAG
GTACTGGCCATTTTGTTGGATGTCAGCGAGGAGAAGGTGAAGGAGATGCA
CAAGTCGGCACTGCCCAGTTACTACAAGTGGCGTCGTTGTGTGGTGCGCG
ACAATGACCAGGTGCAGATCAGCAATATCCTGGGCATTGCCACCGATATC
CTGGGACGCGCGTTGTGCCAGCGACCACCGTGCCAGGATAGCTCTGGCGG
AGGAGGTGGTGGTCTCTCGCGCAGCTTCTCTAGCTGCACCGAGGGATTCA
CCGTGCTGCCCAAGAAGGTCAAGCTGGGCCAAAACAAGGTGGTTGCTCTG
CTGGCAGAACCGCTGGAGAAGAACGACACCCTGAAGCTGCAGGTGGAGAA
GTCCGGTGAGCTAATCGAGCTGCGCAACTTCAAGTGCCGCAATCCCTACA
CCCTGCAGTTCAATATCCCAGAGGCCTGCATGGAGATCTCCACCATGATC
GAGATTCGCATCGAGAAGAACAACAAGAGTCTGGGTGCCAGGCCCATCAA
GTGCGAGAGTCGTCTGCGGGAACTGGAGCAGCTGCTGCGTATTGAGGACT
CGCCAATTGAGTTCATGTGCCATGCCCTGGGAATTGGACCCGTGGAGCGG
GATGCCCTCGATCAGCACTTGCTGCAGTGCTTCCAACGCAACATGCCACC
CAACTTCCACCTGCTGAGTGGTCCCAGCGAGCGTCAGCCACACTTCTTCA
CCCGTCTGGAATCCAGTCCAGAGGAGTACCCCACATTGCTGCACTTCGCC
GCCAGATGGGGCCTGAATCGCCTGTGCATCCAGCTGATGGAGTGCCCAGG
TGGCGACACCGCATGCGGAGTAAGAAACTGCGCCGGACGCACTCCGGCCG
AGTTGGCCGAACAGGAGGGGCATCACAAGTTGGCCCAGAACATCGTCAGT
TTCGCAGAGTTTCACGAACTGACCACCATGTACCACTACTTCAAGGGAGT
GACTCCGCCAGGCGAGAGCTGTCCCAAGCCCAGTGCCAATGTGGTGATTG
AAGCACATCCCGTTAAGGCCGGAAAGACCAACAAGCCACCGAAGGAACTG
CCCACGGCGGAGTATATGGAGATGTCCAGTGGATCGGAGCGGGAGAACAC
ACCTGAAGTGAGGACCAAGACGGAAACCCTTGCTATCTCGAATCTCAACT
ACATAAGTGTGGAAACCGAGGACGAAAACCTGCAGGCTTCCGTGGCCGAA
AAGAAGGTGGAATCTGAAAAGAAACTGCCCGAGGCTGGCAATCAACCTGG
CCCGGAAAAGACCACCAACGAATTGAGGATCAACGAGCCACCCTACTATC
AGTCCAAAGAGCAGAACCAGCAGCCAAAGGAACTCAAGAACCAGAGCAAA
TCCCTGGACGAAGTGGATGCGGCGCCACTCTATCAGACCGACAAATTCAG
CCAAGAGTGCTCGCAACTTTTGGAAAACCAACTGGGCAATGACTACGTAC
TGCAGCCCTCCAATGTGCCGGTGGCCCAGGATGATGGCAACTATTTGTTC
CAGCCATCGAATAGACCCGTGGAGGAGCCCCTCCGGTTAAATCGGTGCAC
CAACAGACAGCCCGGATATGGAACACTGAAGCGCAGTGCCAGCGACGCAT
CCGCCGCCAGTCACACAAGATCCAATGCCGACGATGAGCTGGCCGAGATT
ATGCACGATTTTAAGAACAACGTGCTCTCCATTCGGGACGTGGAAGTGCT
GGTGGAACGCTGGAAGCACCGCAACGATGTACAGCAGAGCTTCCGGGAGA
AACAGGATCAGATCGACCAGCTGCGACGCGAGTACGAGCGCATCCAGGAG
CAGGTGAAGTCTCATCTGAAGCGCGAAACGCCTTTCGAGCGGATCAAGAA
GTTCTTCTTGCGATCCAAGACACCTGGGGGAAACGACAGCCTGCTGGACG
AGACCAAGTCATCGATAGCCACAAGCTGTAGCTTCAAGTCCGCGGGGGGC
GTGAGCTCCAGCGCAGGAGCTGGACGTCCCATCAGTTCGCTGAGCCTACA
GAGTGTGTCCAGCTCGAGTTCCTCCTCCGGCAGACTAAGCACCGGCAGCA
ATTGCAGTGGTGCCTCGCTGGGAGATTCGGGTACCCACTCGGATCACGAG
GATCGTCGCTTCCCGCACTGCCGGATGATGGACAACTACATGGTGCCACC
GACACCGAGACCCGTCTTTACGCCCAGCTCAACGCCCGGTGATGAGCGTC
ATCAGATTGTATTCCCCTCGCCCATGTCCAGTTGCCAGCGCTTGAACACA
CCCACCAGTCCCACGGGATCCGAGCACTACCAAATGTTCCCCTCGAACAT
ACCCGTGTACGGCAGCCAGCCACTGGTTGGATCCCAGAGCAGCAACTACC
TGAACACCATCATGGAGGCCAAGGAGCAGGCGGAGACACAGCACTACCAA
AACCAGAACGGAGTCACCCTGCAGCCCATTAAGCTGAACGAGCGATCGAA
CATCATCTACGGCAAGCTAACCAAGAGCAGCTCCGCCAGCGGATGCAGCT
CCTTCAAACCCAAGCAGATCCCAGTACCATGTCCCCAGGTGGGCAGCATC
GAGGTCCAGGCCGAGGTCTACCAGAATGTGGGTGACGTTGCTCCGGAAAA
GGACTCCAAGGCAGAGGAGGAAACGCCAAACTACATGAACTGCTAGGCCA
TCCCAACGACACATATTGTAATCGAAAGATTCGAAAGATTTTCATATATT
GGTATTCGTTCGATTTACATGCGAGATTTGAATTTTGATCGAAATCGAAA
TCCTTAATATTTGCTTAGTCTGTAAGCTCATCCATTGCATACTAAATGAA
AGGATAAAATGAGTATGAACTAGTTATCGGTATTCTAATTATATGTTTAA
GATATTCGAAAGAGTGCCTTGGGCCTTTGAAGTTTTTGAAACGGAAATTG
GACAGTTAGAACATCAGAGGTCTCAAGATCACTTCGGATTACTTGTATTA
TCTCTGTAGTCTTCGGTTTCAGCGACTAATTGTACATTTGTGAAACGATT
GCAAGCAACCAAATCAACATATCGCTAGCCTTTAAGTATAGATCCTAAGT
CGATACCAACAAACCAAGCAGCTGACATATCAACGCGATTCATTCAACTC
TAGGAATACCCACCCCATTTAGCGCTAAGATACCCACCTTTGGCATGCCG
CTAAGCATGAAAAACTCGTTCATTCTCGACTCCTCAACCCGCAAAGTTAA
ACGCAATAAATTTTTTTATATATAAGCTAAAAAAAAAAAAAAA

RE42507.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:46:32
Subject Length Description Subject Range Query Range Score Percent Strand
stumps-RC 4821 stumps-RC 104..4780 1..4677 23385 100 Plus
stumps.g 4472 stumps.g 69..4472 274..4677 22020 100 Plus
stumps.f 4472 stumps.f 69..4472 274..4677 22020 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:12:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 10429450..10432836 1291..4677 16935 100 Plus
chr3R 27901430 chr3R 10401975..10402248 1..274 1370 100 Plus
chr3R 27901430 chr3R 10417038..10417277 470..709 1200 100 Plus
chr3R 27901430 chr3R 10417759..10417972 890..1103 1070 100 Plus
chr3R 27901430 chr3R 10407806..10408002 274..470 985 100 Plus
chr3R 27901430 chr3R 10429173..10429361 1102..1290 945 100 Plus
chr3R 27901430 chr3R 10417418..10417599 710..891 910 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:56:26 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:12:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14604693..14608079 1291..4677 16935 100 Plus
3R 32079331 3R 14577219..14577492 1..274 1370 100 Plus
3R 32079331 3R 14592281..14592520 470..709 1200 100 Plus
3R 32079331 3R 14593002..14593215 890..1103 1070 100 Plus
3R 32079331 3R 14583050..14583246 274..470 985 100 Plus
3R 32079331 3R 14604416..14604604 1102..1290 945 100 Plus
3R 32079331 3R 14592661..14592842 710..891 910 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 14345524..14348910 1291..4677 16935 100 Plus
3R 31820162 3R 14318050..14318323 1..274 1370 100 Plus
3R 31820162 3R 14333112..14333351 470..709 1200 100 Plus
3R 31820162 3R 14333833..14334046 890..1103 1070 100 Plus
3R 31820162 3R 14323881..14324077 274..470 985 100 Plus
3R 31820162 3R 14345247..14345435 1102..1290 945 100 Plus
3R 31820162 3R 14333492..14333673 710..891 910 100 Plus
Blast to na_te.dros performed 2019-03-16 21:12:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2291..2359 936..1003 135 70 Plus

RE42507.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:12:57 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 10429175..10429361 1104..1290 100 -> Plus
chr3R 10401975..10402248 1..274 100 -> Plus
chr3R 10407807..10408002 275..470 100 -> Plus
chr3R 10417039..10417277 471..709 100 -> Plus
chr3R 10417418..10417599 710..891 100 -> Plus
chr3R 10417761..10417972 892..1103 100 -> Plus
chr3R 10429450..10432813 1291..4654 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:31:38 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
stumps-RC 1..3636 461..4096 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:15:58 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
stumps-RC 1..3636 461..4096 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:35:13 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
stumps-RC 1..3636 461..4096 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:00:26 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
stumps-RC 1..3636 461..4096 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:10:45 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
stumps-RC 1..3636 461..4096 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:31:38 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
stumps-RC 1..4677 1..4677 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:15:58 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
stumps-RC 1..4677 1..4677 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:35:13 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
stumps-RC 3..4679 1..4677 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:00:26 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
stumps-RC 1..4677 1..4677 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:10:45 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
stumps-RC 3..4679 1..4677 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:12:57 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14583051..14583246 275..470 100 -> Plus
3R 14577219..14577492 1..274 100 -> Plus
3R 14592282..14592520 471..709 100 -> Plus
3R 14592661..14592842 710..891 100 -> Plus
3R 14593004..14593215 892..1103 100 -> Plus
3R 14604418..14604604 1104..1290 100 -> Plus
3R 14604693..14608079 1291..4678 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:12:57 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14583051..14583246 275..470 100 -> Plus
3R 14577219..14577492 1..274 100 -> Plus
3R 14592282..14592520 471..709 100 -> Plus
3R 14592661..14592842 710..891 100 -> Plus
3R 14593004..14593215 892..1103 100 -> Plus
3R 14604418..14604604 1104..1290 100 -> Plus
3R 14604693..14608079 1291..4678 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:12:57 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14583051..14583246 275..470 100 -> Plus
3R 14577219..14577492 1..274 100 -> Plus
3R 14592282..14592520 471..709 100 -> Plus
3R 14592661..14592842 710..891 100 -> Plus
3R 14593004..14593215 892..1103 100 -> Plus
3R 14604418..14604604 1104..1290 100 -> Plus
3R 14604693..14608079 1291..4678 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:35:13 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10430140..10430326 1104..1290 100 -> Plus
arm_3R 10402941..10403214 1..274 100 -> Plus
arm_3R 10408773..10408968 275..470 100 -> Plus
arm_3R 10418004..10418242 471..709 100 -> Plus
arm_3R 10418383..10418564 710..891 100 -> Plus
arm_3R 10418726..10418937 892..1103 100 -> Plus
arm_3R 10430415..10433801 1291..4678 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:35:59 Download gff for RE42507.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14333835..14334046 892..1103 100 -> Plus
3R 14345249..14345435 1104..1290 100 -> Plus
3R 14318050..14318323 1..274 100 -> Plus
3R 14323882..14324077 275..470 100 -> Plus
3R 14333113..14333351 471..709 100 -> Plus
3R 14333492..14333673 710..891 100 -> Plus
3R 14345524..14348910 1291..4678 99   Plus

RE42507.pep Sequence

Translation from 460 to 4095

> RE42507.pep
MSVDNPYYFCNETKSPRTPDSQSSSRGFSIFKRRNSKGSSPRPLVMTNPE
QMRLITSANLDTTATMALGSPRGSFNSLAGYPQHAIELQTMNMYRQRSAN
SHSEFRERLNSCNETHSSQCPGGGGASVAGDHDEVFNPLTSPTSSKSHRH
HTLPSGGTRRHSLGNWAQHQHQQQHQQNSGAMGLGSPDEVPSMMAPRPPL
LSPNKFRGSSHRRRDNCGNVNNTSGSSASGFLGSPGYNMDDILIITAKHS
ERAYLRATFLKNHFDKITKQRGRKPFNFLHIKIDDGPFSEEIAHKYQNTA
LQIVILCPALLALPHSFLMTQLSAIIRVEKVLAILLDVSEEKVKEMHKSA
LPSYYKWRRCVVRDNDQVQISNILGIATDILGRALCQRPPCQDSSGGGGG
GLSRSFSSCTEGFTVLPKKVKLGQNKVVALLAEPLEKNDTLKLQVEKSGE
LIELRNFKCRNPYTLQFNIPEACMEISTMIEIRIEKNNKSLGARPIKCES
RLRELEQLLRIEDSPIEFMCHALGIGPVERDALDQHLLQCFQRNMPPNFH
LLSGPSERQPHFFTRLESSPEEYPTLLHFAARWGLNRLCIQLMECPGGDT
ACGVRNCAGRTPAELAEQEGHHKLAQNIVSFAEFHELTTMYHYFKGVTPP
GESCPKPSANVVIEAHPVKAGKTNKPPKELPTAEYMEMSSGSERENTPEV
RTKTETLAISNLNYISVETEDENLQASVAEKKVESEKKLPEAGNQPGPEK
TTNELRINEPPYYQSKEQNQQPKELKNQSKSLDEVDAAPLYQTDKFSQEC
SQLLENQLGNDYVLQPSNVPVAQDDGNYLFQPSNRPVEEPLRLNRCTNRQ
PGYGTLKRSASDASAASHTRSNADDELAEIMHDFKNNVLSIRDVEVLVER
WKHRNDVQQSFREKQDQIDQLRREYERIQEQVKSHLKRETPFERIKKFFL
RSKTPGGNDSLLDETKSSIATSCSFKSAGGVSSSAGAGRPISSLSLQSVS
SSSSSSGRLSTGSNCSGASLGDSGTHSDHEDRRFPHCRMMDNYMVPPTPR
PVFTPSSTPGDERHQIVFPSPMSSCQRLNTPTSPTGSEHYQMFPSNIPVY
GSQPLVGSQSSNYLNTIMEAKEQAETQHYQNQNGVTLQPIKLNERSNIIY
GKLTKSSSASGCSSFKPKQIPVPCPQVGSIEVQAEVYQNVGDVAPEKDSK
AEEETPNYMNC*

RE42507.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:11:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17516-PA 1155 GF17516-PA 1..1155 66..1211 4901 83.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:11:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16864-PA 1012 GG16864-PA 16..1012 215..1211 5275 98.2 Plus
Dere\GG16862-PA 248 GG16862-PA 14..223 4..214 1083 96.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:11:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14194-PA 1177 GH14194-PA 1..1177 66..1211 3934 71.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:11
Subject Length Description Subject Range Query Range Score Percent Strand
stumps-PC 1211 CG31317-PC 1..1211 1..1211 6369 100 Plus
stumps-PE 1220 CG31317-PE 14..1220 4..1211 6340 99.9 Plus
stumps-PB 1012 CG31317-PB 16..1012 215..1211 5222 100 Plus
stumps-PD 1029 CG31317-PD 33..1029 215..1211 5217 99.9 Plus
stumps-PF 973 CG31317-PF 1..973 239..1211 5090 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:11:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22104-PA 1238 GI22104-PA 14..1238 4..1211 4598 76.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:11:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23374-PA 1394 GL23374-PA 99..1394 4..1211 4915 78.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:11:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16174-PD 1244 GA16174-PD 14..1244 4..1211 5004 82.8 Plus
Dpse\GA16174-PB 1168 GA16174-PB 1..1168 66..1211 4704 82.5 Plus
Dpse\GA16174-PC 997 GA16174-PC 1..997 239..1211 4063 84.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:11:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24171-PA 1045 GM24171-PA 1..1030 66..1098 5469 98.5 Plus
Dsec\GM24172-PA 94 GM24172-PA 1..94 1118..1211 487 97.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:11:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18966-PA 738 GD18966-PA 1..738 474..1211 3946 99.5 Plus
Dsim\GD18965-PA 246 GD18965-PA 14..221 4..214 1090 97.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:11:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\stump-PA 1161 GJ24221-PA 1..1161 66..1211 4317 76.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:11:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11745-PA 1034 GK11745-PA 16..1034 215..1211 3976 80.2 Plus
Dwil\GK11744-PA 159 GK11744-PA 1..153 66..221 561 69.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:11:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24244-PA 1012 GE24244-PA 16..1012 215..1211 5276 98.2 Plus
Dyak\GE24243-PA 236 GE24243-PA 1..226 1..220 1134 95.1 Plus

RE42507.hyp Sequence

Translation from 460 to 4095

> RE42507.hyp
MSVDNPYYFCNETKSPRTPDSQSSSRGFSIFKRRNSKGSSPRPLVMTNPE
QMRLITSANLDTTATMALGSPRGSFNSLAGYPQHAIELQTMNMYRQRSAN
SHSEFRERLNSCNETHSSQCPGGGGASVAGDHDEVFNPLTSPTSSKSHRH
HTLPSGGTRRHSLGNWAQHQHQQQHQQNSGAMGLGSPDEVPSMMAPRPPL
LSPNKFRGSSHRRRDNCGNVNNTSGSSASGFLGSPGYNMDDILIITAKHS
ERAYLRATFLKNHFDKITKQRGRKPFNFLHIKIDDGPFSEEIAHKYQNTA
LQIVILCPALLALPHSFLMTQLSAIIRVEKVLAILLDVSEEKVKEMHKSA
LPSYYKWRRCVVRDNDQVQISNILGIATDILGRALCQRPPCQDSSGGGGG
GLSRSFSSCTEGFTVLPKKVKLGQNKVVALLAEPLEKNDTLKLQVEKSGE
LIELRNFKCRNPYTLQFNIPEACMEISTMIEIRIEKNNKSLGARPIKCES
RLRELEQLLRIEDSPIEFMCHALGIGPVERDALDQHLLQCFQRNMPPNFH
LLSGPSERQPHFFTRLESSPEEYPTLLHFAARWGLNRLCIQLMECPGGDT
ACGVRNCAGRTPAELAEQEGHHKLAQNIVSFAEFHELTTMYHYFKGVTPP
GESCPKPSANVVIEAHPVKAGKTNKPPKELPTAEYMEMSSGSERENTPEV
RTKTETLAISNLNYISVETEDENLQASVAEKKVESEKKLPEAGNQPGPEK
TTNELRINEPPYYQSKEQNQQPKELKNQSKSLDEVDAAPLYQTDKFSQEC
SQLLENQLGNDYVLQPSNVPVAQDDGNYLFQPSNRPVEEPLRLNRCTNRQ
PGYGTLKRSASDASAASHTRSNADDELAEIMHDFKNNVLSIRDVEVLVER
WKHRNDVQQSFREKQDQIDQLRREYERIQEQVKSHLKRETPFERIKKFFL
RSKTPGGNDSLLDETKSSIATSCSFKSAGGVSSSAGAGRPISSLSLQSVS
SSSSSSGRLSTGSNCSGASLGDSGTHSDHEDRRFPHCRMMDNYMVPPTPR
PVFTPSSTPGDERHQIVFPSPMSSCQRLNTPTSPTGSEHYQMFPSNIPVY
GSQPLVGSQSSNYLNTIMEAKEQAETQHYQNQNGVTLQPIKLNERSNIIY
GKLTKSSSASGCSSFKPKQIPVPCPQVGSIEVQAEVYQNVGDVAPEKDSK
AEEETPNYMNC*

RE42507.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:05:58
Subject Length Description Subject Range Query Range Score Percent Strand
stumps-PC 1211 CG31317-PC 1..1211 1..1211 6369 100 Plus
stumps-PE 1220 CG31317-PE 14..1220 4..1211 6340 99.9 Plus
stumps-PB 1012 CG31317-PB 16..1012 215..1211 5222 100 Plus
stumps-PD 1029 CG31317-PD 33..1029 215..1211 5217 99.9 Plus
stumps-PF 973 CG31317-PF 1..973 239..1211 5090 100 Plus