Clone RE42927 Report

Search the DGRC for RE42927

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:429
Well:27
Vector:pFlc-1
Associated Gene/TranscriptCG31814-RA
Protein status:RE42927.pep: gold
Sequenced Size:3847

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9031 2002-01-01 Sim4 clustering to Release 2
CG31814 2003-01-01 Sim4 clustering to Release 3
CG31814 2003-08-12 Blastp of sequenced clone
CG31814 2008-04-29 Release 5.5 accounting
CG31814 2008-08-15 Release 5.9 accounting
CG31814 2008-12-18 5.12 accounting

Clone Sequence Records

RE42927.complete Sequence

3847 bp (3847 high quality bases) assembled on 2003-08-12

GenBank Submission: BT010243

> RE42927.complete
AGTCGTGAATCGGGCTTTCAACTGAACGGACGGACTGTGCCCACAGCGAG
GGTCGCCACGAAACTATCTGACGTGCGAGTTGCGATTCCACGCGAGCGTT
CTACGCGAAATGCTACTCGGTGCGTTGTCGTTATCCTTGCCGCTGTCGTT
GGTCCTGCCGCTGTCATTTGCCGGATTTTGGCAGACCTCGCCAAAGTTGT
GAGCGAGTGAAAGTTTTTTGTGCATTTGTCGTGCGGTGCGACTTCGGTTT
ACCATTACTCTTGCATTCGCAATTGCGTGCTCAATTCAAAAAGAAGAAAA
TTAAGGTAAAGGATTTCCATGGCCATGGCAGGACCCCACCGCCTGCCACG
CCCACATACACGCCGCCGCTTCCGCCTACAGGCGGAGTTTAACGTCCGGC
AGTTGGCCATCACGATAATAGCCACTGCCGCGGTTACCATGCTGATGACA
GCCACGCCCACCCTCGCCGAAATCCCCTCAAAGGGAAAACACACGCGACT
GGACACCCAGCAGACGGCACAGGAAGATTCCGACTTTCCGCGATTCGCGG
AACCCATTGCCAATGTCACCGTTTCCGTGGGTCGAGATGCTCTAATGGCA
TGTGTGGTGGAGAACCTTAAGGGATACAAGGTGGCCTGGGTGCGGGTGGA
CACGCAGACGATCCTGTCCATTCACCACAACGTGATCTCGCAGAACAGCC
GCATCAGCCTGACCTACAATGACCATCGATCGTGGTACTTACACATCAAG
GAGGTTGAGGAGACGGATCGCGGTTGGTACATGTGCCAAGTGAACACGGA
TCCCATGCGCTCCAGGAAGGGCTATTTGCAGGTGGTGGTTCCACCGATTA
TTGTCGAGGGCCTGACCAGCAACGATATGGTGGTGCGCGAGGGTCAGAAC
ATCTCGCTGGTTTGCAAGGCACGTGGCTATCCGGAGCCCTACGTCATGTG
GCGACGCGAGGACGGCGAGGAGATGCTAATTGGCGGGGAGCACGTTAACG
TGGTCGACGGTGAGCTGCTGCACATCACCAAAGTGAGTCGCCTGCACATG
GCCGCGTACCTGTGCGTCGCCTCCAACGGAGTCCCACCTTCGATTAGCAA
ACGGGTCCACCTTCGTGTGCAATTTCCGCCGATGCTATCCATACCCAATC
AGCTGGAGGGAGCCTATCTGGGCCAAGATGTTATACTCGAGTGCCACACG
GAGGCCTATCCAGCATCGATTAACTATTGGACCACGGAACGCGGAGATAT
GATCATATCGGACACCTCGCGAGCCGGCGATAAATACGAGACCACATCGA
CCGTCAGCGGTTACACAAAGTACATGAAGTTGAAAATCCGTGCCGTTGGA
CCCAACGATTTCGGCACATATCGCTGCGTGGCCAAGAATTCGCTTGGCGA
AACGGATGGAAATATAAAACTGGACGAAATGCCGACACCAACCACGGCCA
TCATTTCAGAAATGTCCTTGCTGAACCGCAGCTATGATGGCAAGAGACGT
CATAGAAATAAATTTGACTCGGCTAACGCTCTGCCTGATTATGGGGTTGA
GGAGTGGCGTGACGGAGCCCAAGGCAACAATGCTGGAAACAATGGCGATA
ACAATCAAACGCCCGTGCGTAATCCGCCCGGAGCATTCCACAATTCTGCA
GGCTCACTGGCGCAGCATAATCTACTTGCTAAAATAATGCTCGGCATTAA
AACGCAATCATTTGGGATTTTCAAACGTTTATCGAGCTCTTTGCCGCTGG
CGGCGGGACAGAGCTTTCTCTGGCTGTCGACGTTATCGCTGGTCTCAGCC
CCAAGTCGGTGGCGTATGAGTAATGTGGAAAATCGGCCGAACTCACCGGA
GACCGTTGTCAACAACGATACCGCCGCCGAATGCTGGGAGACCAGAAGCC
ATTGCGTGAGCGAAAGCAACAACAACAACAACAGTCGCATTACCCAACGC
CCACCGATGTGGGCGCGGCATTTGCGCATATTTCACATTGCTCATACGCC
GTGTGGCGCGTCAACGCAATACCAACGCCTATGCGAACGCCAATGGCAAT
GGCAAAGGCTGTGGCAGTGGCAATGTCAGTGGAAGTGGCAACATCAATGG
CAGTGGCCAATGCTCATTTGCATAGTTATATTGGCTGGCTGTTTTGTTCG
GTGGCTGCCAATGTTGCTGCATTTTATCGGCCGGCACATCGGAACATTTT
CTATTAGCGCGACGCATAGGCAACATTTAATGTGCACATTTTGGGACAAC
CGTGGTAATAAGGTTGTCGCCAAAAATACCACCCCAGCCAGGCCAAGTAC
TTTCGAAATGCTCTGCTCCCGGATGTTTTCAAGATGAAATCAAATAATTG
CAAAGGCAAAAAGAAACTCATTTAGGGCACAAGCAGCTTGAAGAATGAAA
TCAAACCTTGGCCAGGCGAGGACCAGGATAACGAGGACGAAGTGGGACGT
GCGAGTGGTCCATACAACTGCAGTGGTTGAAAATCAGATATAGATATGTT
TATACTAGAGCGTAAAATGAAAATCATGTTAGGGACGAGCTGGCCAGAAG
TGACAGCTGAAGTGCAGCAAATAATGATAGCTACATCCGACATTCGGCAA
CGGATGGGGCTTTAGAACTAATCGGAAGTCTAAGAAAATTTAATGTACCT
ATTCCTTTAATGAATGTATTAAAAAATATATATTTTATTACAAAAATTAT
ATTCAAAGCATTTCATGTTTTTTATGGTTTTATATAAATAAAGTTATATG
ACTAAACGAGAAGCCATACATGTTCATTTCATTTCTTACAATTACTTTTC
AAAACAATTAGAGATCGTTATGGTTTTTGTTCACAACACACAGGAAAGTA
AAAATGTTTCATTATGTATAAACCAATTAAAAGAAAATTAATTAATTAAA
TCGCCAGAAAAATTAAATACTGGAATGACAAAAAAAAACGGAAATACGGT
TAATCAAATTTGCATTTATATGAAAGTATTTACGCATACTCATACATAGC
GAATTTACATAGTAAATTTAGCAGAATTATAAAAAAAAATAAAAATTAAA
CAAAAAATTGTGAACCAATAGCTAAAACAAAAAAGTGTTGTATTAAGTAA
TTTATTGGATTAAGTGCTGACACTTAACAGACAAATGAAATTGTTTTAGC
AATTTTGTGAAGCTGTTAACAATACGCTTATTCAATTAATTTGGGTTGCA
TTGCATCTAATATGTTTAACTTTATGAGCAAATAGAGCATGTAATAAATA
TAAAGCTCAATGAATACGAAATTAACCTTAATTTTATTTATTTTGTTGTA
GAGATTAATTAATTGTAAATATTTCAATGGTGCAAGGCAAGAGTATTAAA
TAAACCCATTGAAACTTCGCTGTATATATAAAGAAAGCTATATGTGCTAC
TAATACATATATTTCCATCTGAGGCTCATAGGGCTTACCTGACCCTATCT
AAATAATTTAATAATTATTATAAATTGCGCTTAAGTTTTTATTGTAAATA
ATTATCTCATACTATCATATACAAGTTGAAATGAATGTTAACGCGTTAAA
TAAATAAAATATTTATCTTTAGATGTAGAACCGCAGAAGAAGCAAGCAAA
ATTTTGCAGTTGAAAATGATGATGATGAGAACTATTTAATTAAGCCTACT
TAAGAAGCTCAGAATACTTAAATATAAAGTCGGAAAATTATACCTAACGT
CTAAGTTAGTTATAACTTATTATATATGTATTGAGCTCTATATATGTGAA
TAAGTGGCATATCTATGTGACATATTTGTATGTAAATGTACGCAAAAGTT
TACAGCAAAAATAAAGCCCAAAAACAAGCCCAAAAAAAAAAAAAAAA

RE42927.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:54:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG31814-RA 3847 CG31814-RA 17..3847 1..3831 19155 100 Plus
CG31814.a 3097 CG31814.a 64..3097 798..3831 15170 100 Plus
CG11320-RB 1338 CG11320-RB 505..558 754..807 180 88.8 Plus
CG11320-RB 1338 CG11320-RB 378..417 627..666 155 92.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:33:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 13675556..13677815 3831..1572 11270 99.9 Minus
chr2L 23010047 chr2L 13715678..13715967 290..1 1450 100 Minus
chr2L 23010047 chr2L 13688770..13688977 732..525 1040 100 Minus
chr2L 23010047 chr2L 13712636..13712830 485..291 975 100 Minus
chr2L 23010047 chr2L 13683071..13683236 1426..1261 830 100 Minus
chr2L 23010047 chr2L 13688272..13688432 998..838 790 99.4 Minus
chr2L 23010047 chr2L 13686209..13686346 1261..1124 690 100 Minus
chr2L 23010047 chr2L 13688042..13688171 1123..994 650 100 Minus
chr2L 23010047 chr2L 13681808..13681896 1574..1486 445 100 Minus
chr2L 23010047 chr2L 13688633..13688700 799..732 340 100 Minus
chr2L 23010047 chr2L 13682891..13682951 1486..1426 305 100 Minus
chr2L 23010047 chr2L 13689176..13689218 526..484 215 100 Minus
chr2L 23010047 chr2L 13688531..13688571 838..798 205 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:56:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:33:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13676859..13679119 3832..1572 11305 100 Minus
2L 23513712 2L 13717021..13717310 290..1 1450 100 Minus
2L 23513712 2L 13690084..13690291 732..525 1040 100 Minus
2L 23513712 2L 13713972..13714166 485..291 975 100 Minus
2L 23513712 2L 13684384..13684549 1426..1261 830 100 Minus
2L 23513712 2L 13689586..13689746 998..838 790 99.4 Minus
2L 23513712 2L 13687521..13687658 1261..1124 690 100 Minus
2L 23513712 2L 13689356..13689485 1123..994 650 100 Minus
2L 23513712 2L 13683122..13683210 1574..1486 445 100 Minus
2L 23513712 2L 13689947..13690014 799..732 340 100 Minus
2L 23513712 2L 13684204..13684264 1486..1426 305 100 Minus
2L 23513712 2L 13690490..13690532 526..484 215 100 Minus
2L 23513712 2L 13689845..13689885 838..798 205 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:26:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13676859..13679119 3832..1572 11305 100 Minus
2L 23513712 2L 13717021..13717310 290..1 1450 100 Minus
2L 23513712 2L 13690084..13690291 732..525 1040 100 Minus
2L 23513712 2L 13713972..13714166 485..291 975 100 Minus
2L 23513712 2L 13684384..13684549 1426..1261 830 100 Minus
2L 23513712 2L 13689586..13689746 998..838 790 99.3 Minus
2L 23513712 2L 13687521..13687658 1261..1124 690 100 Minus
2L 23513712 2L 13689356..13689485 1123..994 650 100 Minus
2L 23513712 2L 13683122..13683210 1574..1486 445 100 Minus
2L 23513712 2L 13689947..13690014 799..732 340 100 Minus
2L 23513712 2L 13684204..13684264 1486..1426 305 100 Minus
2L 23513712 2L 13690490..13690532 526..484 215 100 Minus
2L 23513712 2L 13689845..13689885 838..798 205 100 Minus
Blast to na_te.dros performed 2019-03-16 03:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6900..7022 3574..3451 139 63.3 Minus
GATE 8507 GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). 1204..1470 3491..3216 124 53.2 Minus

RE42927.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:34:18 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 13681809..13681895 1487..1573 100 <- Minus
chr2L 13682891..13682950 1427..1486 100 <- Minus
chr2L 13683071..13683235 1262..1426 100 <- Minus
chr2L 13686209..13686346 1124..1261 100 <- Minus
chr2L 13688042..13688170 995..1123 100 <- Minus
chr2L 13688276..13688431 839..994 100 <- Minus
chr2L 13688531..13688570 799..838 100 <- Minus
chr2L 13688634..13688699 733..798 100 <- Minus
chr2L 13688770..13688975 527..732 100 <- Minus
chr2L 13689176..13689217 485..526 100 <- Minus
chr2L 13675556..13677813 1574..3831 94 <- Minus
chr2L 13712637..13712830 291..484 100 <- Minus
chr2L 13715678..13715967 1..290 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:04:21 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
CG31814-RA 1..2019 319..2337 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:31:49 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
CG31814-RA 1..2019 319..2337 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:46:41 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
CG31814-RA 1..2019 319..2337 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:22:09 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
CG31814-RA 1..2019 319..2337 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:08:47 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
CG31814-RA 1..2019 319..2337 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:04:20 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
CG31814-RA 1..3831 1..3831 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:31:49 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
CG31814-RA 1..3831 1..3831 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:46:41 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
CG31814-RA 11..3841 1..3831 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:22:10 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
CG31814-RA 1..3831 1..3831 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:08:47 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
CG31814-RA 11..3841 1..3831 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:34:18 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13676860..13679117 1574..3831 100 <- Minus
2L 13683123..13683209 1487..1573 100 <- Minus
2L 13684204..13684263 1427..1486 100 <- Minus
2L 13684384..13684548 1262..1426 100 <- Minus
2L 13687521..13687658 1124..1261 100 <- Minus
2L 13689356..13689484 995..1123 100 <- Minus
2L 13689590..13689745 839..994 100 <- Minus
2L 13689845..13689884 799..838 100 <- Minus
2L 13689948..13690013 733..798 100 <- Minus
2L 13690084..13690289 527..732 100 <- Minus
2L 13690490..13690531 485..526 100 <- Minus
2L 13713973..13714166 291..484 100 <- Minus
2L 13717021..13717310 1..290 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:34:18 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13676860..13679117 1574..3831 100 <- Minus
2L 13683123..13683209 1487..1573 100 <- Minus
2L 13684204..13684263 1427..1486 100 <- Minus
2L 13684384..13684548 1262..1426 100 <- Minus
2L 13687521..13687658 1124..1261 100 <- Minus
2L 13689356..13689484 995..1123 100 <- Minus
2L 13689590..13689745 839..994 100 <- Minus
2L 13689845..13689884 799..838 100 <- Minus
2L 13689948..13690013 733..798 100 <- Minus
2L 13690084..13690289 527..732 100 <- Minus
2L 13690490..13690531 485..526 100 <- Minus
2L 13713973..13714166 291..484 100 <- Minus
2L 13717021..13717310 1..290 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:34:18 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13676860..13679117 1574..3831 100 <- Minus
2L 13683123..13683209 1487..1573 100 <- Minus
2L 13684204..13684263 1427..1486 100 <- Minus
2L 13684384..13684548 1262..1426 100 <- Minus
2L 13687521..13687658 1124..1261 100 <- Minus
2L 13689356..13689484 995..1123 100 <- Minus
2L 13689590..13689745 839..994 100 <- Minus
2L 13689845..13689884 799..838 100 <- Minus
2L 13689948..13690013 733..798 100 <- Minus
2L 13690084..13690289 527..732 100 <- Minus
2L 13690490..13690531 485..526 100 <- Minus
2L 13713973..13714166 291..484 100 <- Minus
2L 13717021..13717310 1..290 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:46:41 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13689356..13689484 995..1123 100 <- Minus
arm_2L 13689590..13689745 839..994 100 <- Minus
arm_2L 13689845..13689884 799..838 100 <- Minus
arm_2L 13689948..13690013 733..798 100 <- Minus
arm_2L 13684384..13684548 1262..1426 100 <- Minus
arm_2L 13687521..13687658 1124..1261 100 <- Minus
arm_2L 13676860..13679117 1574..3831 100 <- Minus
arm_2L 13683123..13683209 1487..1573 100 <- Minus
arm_2L 13684204..13684263 1427..1486 100 <- Minus
arm_2L 13690084..13690289 527..732 100 <- Minus
arm_2L 13690490..13690531 485..526 100 <- Minus
arm_2L 13713973..13714166 291..484 100 <- Minus
arm_2L 13717021..13717310 1..290 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:55:46 Download gff for RE42927.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13676860..13679117 1574..3831 100 <- Minus
2L 13683123..13683209 1487..1573 100 <- Minus
2L 13684204..13684263 1427..1486 100 <- Minus
2L 13684384..13684548 1262..1426 100 <- Minus
2L 13687521..13687658 1124..1261 100 <- Minus
2L 13689356..13689484 995..1123 100 <- Minus
2L 13689590..13689745 839..994 100 <- Minus
2L 13689845..13689884 799..838 100 <- Minus
2L 13717021..13717310 1..290 100   Minus
2L 13690084..13690289 527..732 100 <- Minus
2L 13690490..13690531 485..526 100 <- Minus
2L 13713973..13714166 291..484 100 <- Minus
2L 13689948..13690013 733..798 100 <- Minus

RE42927.pep Sequence

Translation from 318 to 2336

> RE42927.pep
MAMAGPHRLPRPHTRRRFRLQAEFNVRQLAITIIATAAVTMLMTATPTLA
EIPSKGKHTRLDTQQTAQEDSDFPRFAEPIANVTVSVGRDALMACVVENL
KGYKVAWVRVDTQTILSIHHNVISQNSRISLTYNDHRSWYLHIKEVEETD
RGWYMCQVNTDPMRSRKGYLQVVVPPIIVEGLTSNDMVVREGQNISLVCK
ARGYPEPYVMWRREDGEEMLIGGEHVNVVDGELLHITKVSRLHMAAYLCV
ASNGVPPSISKRVHLRVQFPPMLSIPNQLEGAYLGQDVILECHTEAYPAS
INYWTTERGDMIISDTSRAGDKYETTSTVSGYTKYMKLKIRAVGPNDFGT
YRCVAKNSLGETDGNIKLDEMPTPTTAIISEMSLLNRSYDGKRRHRNKFD
SANALPDYGVEEWRDGAQGNNAGNNGDNNQTPVRNPPGAFHNSAGSLAQH
NLLAKIMLGIKTQSFGIFKRLSSSLPLAAGQSFLWLSTLSLVSAPSRWRM
SNVENRPNSPETVVNNDTAAECWETRSHCVSESNNNNNSRITQRPPMWAR
HLRIFHIAHTPCGASTQYQRLCERQWQWQRLWQWQCQWKWQHQWQWPMLI
CIVILAGCFVRWLPMLLHFIGRHIGTFSISATHRQHLMCTFWDNRGNKVV
AKNTTPARPSTFEMLCSRMFSR*

RE42927.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:03:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21699-PA 655 GF21699-PA 3..655 8..672 2814 81.6 Plus
Dana\GF14310-PA 570 GF14310-PA 72..393 49..372 877 52.4 Plus
Dana\GF14311-PA 396 GF14311-PA 1..309 83..397 867 51.7 Plus
Dana\GF22310-PA 554 GF22310-PA 20..321 74..374 823 49.4 Plus
Dana\GF22082-PA 499 GF22082-PA 103..407 74..377 789 51.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:03:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10188-PA 672 GG10188-PA 1..672 1..672 3230 94.7 Plus
Dere\GG24289-PA 606 GG24289-PA 104..498 49..429 890 45.6 Plus
Dere\GG24291-PA 446 GG24291-PA 16..315 74..372 879 54.1 Plus
Dere\GG18577-PA 555 GG18577-PA 42..343 74..374 834 49.5 Plus
Dere\GG24038-PA 537 GG24038-PA 118..422 74..377 791 51.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:03:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13877-PA 391 GH13877-PA 8..371 56..419 1918 95.9 Plus
Dgri\GH10699-PA 403 GH10699-PA 9..304 74..372 916 56.1 Plus
Dgri\GH10697-PA 567 GH10697-PA 83..390 60..372 892 54.1 Plus
Dgri\GH24041-PA 569 GH24041-PA 42..343 74..374 845 50.3 Plus
Dgri\GH13645-PA 518 GH13645-PA 105..409 74..377 795 51.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:24:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG31814-PA 672 CG31814-PA 1..672 1..672 3616 100 Plus
CG31814-PB 643 CG31814-PB 1..643 1..672 3414 95.7 Plus
DIP-eta-PB 450 CG14010-PB 43..360 74..397 875 51.5 Plus
DIP-eta-PD 450 CG14010-PD 43..360 74..397 875 51.5 Plus
DIP-theta-PA 606 CG31646-PA 102..496 49..429 875 45.9 Plus
DIP-delta-PE 469 CG34391-PE 42..341 72..376 842 53.4 Plus
DIP-delta-PD 469 CG34391-PD 42..341 72..376 842 53.4 Plus
DIP-alpha-PC 554 CG32791-PC 42..343 74..374 811 49.5 Plus
DIP-alpha-PA 554 CG32791-PA 42..343 74..374 811 49.5 Plus
DIP-zeta-PC 512 CG31708-PC 113..417 74..377 782 51.3 Plus
DIP-zeta-PB 532 CG31708-PB 113..417 74..377 782 51.3 Plus
DIP-zeta-PA 532 CG31708-PA 113..417 74..377 782 51.3 Plus
DIP-beta-PG 534 CG42343-PG 88..399 74..384 781 47.3 Plus
DIP-epsilon-PA 467 CG42368-PA 49..355 71..376 770 47.6 Plus
DIP-beta-PF 555 CG42343-PF 98..420 74..384 762 46 Plus
DIP-beta-PC 555 CG42343-PC 98..420 74..384 762 46 Plus
DIP-iota-PB 376 CG11320-PB 31..316 74..363 737 49.8 Plus
CG45781-PA 548 CG45781-PA 3..375 14..395 676 37.7 Plus
DIP-gamma-PA 413 CG14521-PA 30..372 64..386 675 42.4 Plus
DIP-alpha-PB 432 CG32791-PB 1..221 155..374 580 49.1 Plus
Lac-PA 359 CG12369-PA 42..324 87..374 357 32.2 Plus
CG6867-PA 949 CG6867-PA 427..671 172..420 333 31.2 Plus
Ama-PC 333 CG2198-PC 25..332 74..378 325 28.7 Plus
Ama-PA 333 CG2198-PA 25..332 74..378 325 28.7 Plus
Ama-PB 341 CG2198-PB 33..340 74..378 325 28.7 Plus
CG7166-PC 467 CG7166-PC 39..327 74..383 285 27.7 Plus
CG7166-PB 467 CG7166-PB 39..327 74..383 285 27.7 Plus
klg-PA 545 CG6669-PA 71..379 50..372 283 26.7 Plus
CG34353-PB 566 CG34353-PB 86..364 74..372 267 28.9 Plus
CG34353-PA 566 CG34353-PA 86..364 74..372 267 28.9 Plus
CG34353-PC 581 CG34353-PC 86..364 74..372 267 28.9 Plus
wrapper-PA 500 CG10382-PA 32..328 65..374 222 26.3 Plus
dpr10-PD 362 CG32057-PD 25..251 54..265 221 30.3 Plus
dpr17-PE 508 CG31361-PE 255..456 79..263 221 30.6 Plus
dpr17-PC 508 CG31361-PC 255..456 79..263 221 30.6 Plus
dpr17-PB 508 CG31361-PB 255..456 79..263 221 30.6 Plus
dpr17-PD 664 CG31361-PD 411..612 79..263 221 30.6 Plus
dpr17-PA 664 CG31361-PA 411..612 79..263 221 30.6 Plus
dpr6-PE 283 CG14162-PE 43..271 42..265 214 30.4 Plus
dpr6-PA 283 CG14162-PA 43..271 42..265 214 30.4 Plus
dpr6-PD 286 CG14162-PD 43..271 42..265 214 30.4 Plus
dpr6-PC 390 CG14162-PC 43..271 42..265 214 30.4 Plus
dpr6-PF 396 CG14162-PF 43..271 42..265 214 30.4 Plus
Dscam1-PR 2013 CG17800-PR 652..908 105..374 210 23.9 Plus
Dscam1-PX 2031 CG17800-PX 655..911 105..374 210 23.9 Plus
Dscam1-PW 2019 CG17800-PW 664..914 123..374 208 25.2 Plus
Dscam1-PBH 2035 CG17800-PBH 677..915 135..374 207 25.2 Plus
Dscam1-PC 2016 CG17800-PC 660..911 122..374 206 24.6 Plus
Dscam1-PA 2016 CG17800-PA 660..911 122..374 206 24.6 Plus
dpr11-PC 360 CG33202-PC 125..255 81..211 201 36.8 Plus
dpr11-PB 360 CG33202-PB 125..255 81..211 201 36.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:03:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10093-PA 691 GI10093-PA 11..639 17..651 2365 72.4 Plus
Dmoj\GI11247-PA 470 GI11247-PA 47..342 74..372 910 56.1 Plus
Dmoj\GI11243-PA 571 GI11243-PA 87..423 60..394 893 50.9 Plus
Dmoj\GI13190-PA 467 GI13190-PA 16..307 72..368 836 53.8 Plus
Dmoj\GI11934-PA 527 GI11934-PA 115..419 74..377 793 51.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:03:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25687-PA 395 GL25687-PA 16..395 269..672 1289 64.7 Plus
Dper\GL25686-PA 232 GL25686-PA 1..230 3..268 946 70.8 Plus
Dper\GL26643-PA 462 GL26643-PA 50..345 74..372 893 55.1 Plus
Dper\GL26641-PA 603 GL26641-PA 100..421 49..372 889 52.4 Plus
Dper\GL25539-PA 523 GL25539-PA 101..513 74..466 781 42.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:03:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16498-PA 684 GA16498-PA 1..684 3..672 2749 78 Plus
Dpse\GA29001-PA 462 GA29001-PA 50..345 74..372 892 55.1 Plus
Dpse\GA28999-PA 579 GA28999-PA 76..397 49..372 889 52.4 Plus
Dpse\GA23467-PA 453 GA23467-PA 16..315 72..376 858 53.7 Plus
Dpse\GA23218-PA 565 GA23218-PA 38..339 74..374 829 49.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:03:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25389-PA 675 GM25389-PA 1..675 1..672 3573 98.1 Plus
Dsec\GM18007-PA 604 GM18007-PA 102..496 49..429 895 46 Plus
Dsec\GM18009-PA 449 GM18009-PA 16..311 74..372 894 54.8 Plus
Dsec\GM12720-PA 550 GM12720-PA 42..343 74..374 835 49.5 Plus
Dsec\GM12550-PA 512 GM12550-PA 113..417 74..377 788 51.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:03:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22051-PA 675 GD22051-PA 1..675 1..672 3571 98.1 Plus
Dsim\GD22639-PA 514 GD22639-PA 102..477 49..407 899 49 Plus
Dsim\GD16325-PA 648 GD16325-PA 140..441 74..374 829 49.5 Plus
Dsim\GD22365-PA 512 GD22365-PA 113..417 74..377 788 51.3 Plus
Dsim\GD22562-PA 377 GD22562-PA 32..317 74..363 752 49.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:03:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18366-PA 670 GJ18366-PA 18..670 28..672 2443 70.2 Plus
Dvir\GJ12356-PA 423 GJ12356-PA 47..342 74..372 906 55.8 Plus
Dvir\GJ12336-PA 560 GJ12336-PA 83..390 60..372 886 53.8 Plus
Dvir\GJ15333-PA 556 GJ15333-PA 42..343 74..374 832 50.2 Plus
Dvir\GJ14067-PA 518 GJ14067-PA 101..405 74..377 793 51.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:03:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24547-PA 614 GK24547-PA 16..602 29..643 2432 78.3 Plus
Dwil\GK15428-PA 950 GK15428-PA 547..866 74..399 907 51.8 Plus
Dwil\GK15428-PA 950 GK15428-PA 98..419 49..372 888 52.4 Plus
Dwil\GK16718-PA 551 GK16718-PA 42..350 74..381 843 50 Plus
Dwil\GK23705-PA 528 GK23705-PA 104..408 74..377 788 51 Plus
Dwil\GK24515-PA 357 GK24515-PA 11..303 74..368 761 48 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:03:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11503-PA 661 GE11503-PA 1..661 1..672 3276 94.5 Plus
Dyak\GE18986-PA 422 GE18986-PA 16..311 74..372 893 54.8 Plus
Dyak\GE18984-PA 573 GE18984-PA 71..464 49..429 888 46.2 Plus
Dyak\GE16888-PA 551 GE16888-PA 42..343 74..374 833 49.5 Plus
Dyak\GE10621-PA 535 GE10621-PA 114..418 74..377 790 51.3 Plus

RE42927.hyp Sequence

Translation from 318 to 2336

> RE42927.hyp
MAMAGPHRLPRPHTRRRFRLQAEFNVRQLAITIIATAAVTMLMTATPTLA
EIPSKGKHTRLDTQQTAQEDSDFPRFAEPIANVTVSVGRDALMACVVENL
KGYKVAWVRVDTQTILSIHHNVISQNSRISLTYNDHRSWYLHIKEVEETD
RGWYMCQVNTDPMRSRKGYLQVVVPPIIVEGLTSNDMVVREGQNISLVCK
ARGYPEPYVMWRREDGEEMLIGGEHVNVVDGELLHITKVSRLHMAAYLCV
ASNGVPPSISKRVHLRVQFPPMLSIPNQLEGAYLGQDVILECHTEAYPAS
INYWTTERGDMIISDTSRAGDKYETTSTVSGYTKYMKLKIRAVGPNDFGT
YRCVAKNSLGETDGNIKLDEMPTPTTAIISEMSLLNRSYDGKRRHRNKFD
SANALPDYGVEEWRDGAQGNNAGNNGDNNQTPVRNPPGAFHNSAGSLAQH
NLLAKIMLGIKTQSFGIFKRLSSSLPLAAGQSFLWLSTLSLVSAPSRWRM
SNVENRPNSPETVVNNDTAAECWETRSHCVSESNNNNNSRITQRPPMWAR
HLRIFHIAHTPCGASTQYQRLCERQWQWQRLWQWQCQWKWQHQWQWPMLI
CIVILAGCFVRWLPMLLHFIGRHIGTFSISATHRQHLMCTFWDNRGNKVV
AKNTTPARPSTFEMLCSRMFSR*

RE42927.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:34:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG31814-PA 672 CG31814-PA 1..672 1..672 3616 100 Plus
CG31814-PB 643 CG31814-PB 1..643 1..672 3414 95.7 Plus
CG14010-PB 450 CG14010-PB 43..360 74..397 875 51.5 Plus
CG14010-PD 450 CG14010-PD 43..360 74..397 875 51.5 Plus
CG31646-PA 606 CG31646-PA 102..496 49..429 875 45.9 Plus