Clone RE43539 Report

Search the DGRC for RE43539

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:435
Well:39
Vector:pFlc-1
Associated Gene/TranscriptCG1910-RD
Protein status:RE43539.pep: gold
Preliminary Size:2129
Sequenced Size:1800

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1910 2002-10-12 Blastp of sequenced clone
CG1910 2003-01-01 Sim4 clustering to Release 3
CG1910 2008-04-29 Release 5.5 accounting
CG1910 2008-08-15 Release 5.9 accounting
CG1910 2008-12-18 5.12 accounting

Clone Sequence Records

RE43539.complete Sequence

1800 bp (1800 high quality bases) assembled on 2002-10-12

GenBank Submission: BT001648

> RE43539.complete
ACTTGCATCCGCTCCGCGGTGTTGTGCATGTGTATGTATGCGATACGTTG
CGCTCTAGATTCGGTTCCATTTTTTAGCGGCGACTTTACTAATAGATATA
CAAACGCACTCCCAAACGCCGCTCGTTCATTGAGCGGGCGCAGAAGGAAA
GCGAGGAGCTTGTGCGAACAATGGGCGGAAGCCTGGAGCTGGCGGGCGGG
CGGCGGACGCGGTCTAGCACTCGAGGAACGCCGACGCGAGCCGCCGAGGC
AGTGACGCCGCCACCCAGCAAAAAGGCGCGCACTTCGCCGGCCTCGGCCA
CAAAGGCCAGTGCAGGAAAGGGACGCGGAGCACGTAAGCTAGACGTAGGC
GCTGATGAGCCCGAGCCTGAGCTGGAGAAGGAGAAGGAGAAGGTACAGAC
CTCGGTCAAGGGAAAGGGAGCTGTCAAGAAGGACAAGAAAGAGGTCAAGA
AGCAGGAGAAGGCAACTGAGAAATATGCGCCGGAGGAGGCAAAGGAAGAT
GTAGCTGAGGCAAAAGAGGAAGACGCCAGTCCCGCCGGGGTCCAGGACCA
ACCGGATGGTGTGGAGAATCTTCCTTCAGTGGCGGAAGCGAAGCAGAATC
ATGTCGATGAAGTCAAACCAATATCAGAAGAACCTGGGAATTCAAGCGAA
GAGGTGCCAAAAGCTGAAGAGCCCCTCAAGTCGAGCGGAGAAACGTCGGA
GAATGGAGCCGCTACAGAGACTGCCGCTGCACCTAAAGAACCTGCTTCTG
TTATGGATGTGGACGAAGATGAGACGCTCGTCGAAAACACACCATCCGCA
AATAAAGAAAAGGCATTAGATGACGAAAAAGAACCAGAACAGAAGTCAGA
GGAACATGCAGCAGCAGTTTTGGAGTCCAAGGAGCAAAATGAGCCAGCCA
AGGAGCCCACACCAGAACCTATGGAAGTGGACGGAAGTTCGAAGGGCAGT
TCGGACACCGCTCAAGTAGACACACCAGCCATCGAAAACGTTTCTGCCGC
TCCAGAAACAGAAGCAGCAGCAAAGACTACGGAGTCTAGCAATGATGTGG
TGGAAGTGGCCACAGAGGGCAAAGAAACAGTTTTAGAAGTGCCCGCTGCC
GAGCCCAAGGAAGCCGAAAGCACTGTAGAGTCCGCGGAAGAGCTTACGGA
AACCAGCACCGTGGTGGTGACTGAGCCGAAGGAAGCCGCCAGCAGCGAAG
AGGAGCCTAGCAAGGTTGTGGACTCTGCGGAACCCAAGGAGGCAGAGAGC
AATACGGATGAGAGCGCCACGCCCGTTCCTATTGATGTTTCTACCGCCCC
CGCATCCAATGATGTCAGCAAGCCCTTGGAAATCGATACAACCTTGGTTA
AGACTGCCGACAGTCCTGCAAAGGAACCACAGGAAATCTGCGAGGTCAAG
AAGGCCGAAATTAATGTAAATGGTGAGCCCAAGATCGTCAACAGTTCCGC
CGAGGTGGGCGAGAATGCTGCGCCCAAAGTGTGTAACTAAACCAATCCCA
CCGATGGACAATCAACAACTTTAATGCGTTGCAGATGTGTAAAAAAGCGT
CTTCATCTCGCCCGCCGAGTTGGTCTGATGTTGCCAACTACATGCAAACA
TTTAAGAGTTCCCCCAAACAAAGCTACAATATTCTTTTTTAATTGATAAC
TTGATTTCGTACTCCGAAATCCCTTAACTTTGATAATAGTTCGCGTCCTC
CAGTATTTGGTTGACGCGAAGGACGCCATAGGCTGCAATCGATGCTGGAC
TTTCAATGCTGCGGTGTGTGCGTCAGCTGGACAGAAAAAAAAAAAAAAAA

RE43539.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:39:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG1910-RD 1801 CG1910-RD 1..1800 1..1800 8985 99.9 Plus
CG1910.h 2527 CG1910.h 1..1800 1..1800 8985 99.9 Plus
CG1910.d 2556 CG1910.d 486..2185 101..1800 8485 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:29:28
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 27571929..27572943 414..1428 5030 99.7 Plus
chr3R 27901430 chr3R 27572995..27573357 1422..1784 1815 100 Plus
chr3R 27901430 chr3R 27571558..27571873 102..417 1580 100 Plus
chr3R 27901430 chr3R 27570936..27571036 1..101 490 99 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:56:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:29:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31749578..31750592 414..1428 5060 99.9 Plus
3R 32079331 3R 31750644..31751022 1422..1800 1880 99.7 Plus
3R 32079331 3R 31749207..31749522 102..417 1580 100 Plus
3R 32079331 3R 31748585..31748685 1..101 505 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:12:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 31490409..31491423 414..1428 5060 99.9 Plus
3R 31820162 3R 31491475..31491853 1422..1800 1880 99.7 Plus
3R 31820162 3R 31490038..31490353 102..417 1580 100 Plus
3R 31820162 3R 31489416..31489516 1..101 505 100 Plus
Blast to na_te.dros performed 2019-03-15 16:29:26
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy3 6973 gypsy3 GYPSY3 6973bp 2110..2139 903..932 114 86.7 Plus

RE43539.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:30:21 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 27570936..27571036 1..101 99 -> Plus
chr3R 27571558..27571872 102..416 93 -> Plus
chr3R 27571932..27572937 417..1422 99 -> Plus
chr3R 27572996..27573357 1423..1784 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:17:13 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
CG1910-RA 74..1470 94..1490 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:11:24 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
CG1910-RA 74..1470 94..1490 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:03:13 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
CG1910-RA 74..1470 94..1490 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:02:14 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
CG1910-RA 74..1470 94..1490 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:38:04 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
CG1910-RA 74..1470 94..1490 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:33:07 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
CG1910-RD 1..1784 1..1784 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:11:24 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
CG1910-RD 1..1784 1..1784 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:03:13 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
CG1910-RD 27..1810 1..1784 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:02:14 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
CG1910-RD 1..1784 1..1784 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:38:04 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
CG1910-RD 27..1810 1..1784 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:30:21 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31748585..31748685 1..101 100 -> Plus
3R 31749207..31749521 102..416 100 -> Plus
3R 31749581..31750586 417..1422 100 -> Plus
3R 31750645..31751006 1423..1784 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:30:21 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31748585..31748685 1..101 100 -> Plus
3R 31749207..31749521 102..416 100 -> Plus
3R 31749581..31750586 417..1422 100 -> Plus
3R 31750645..31751006 1423..1784 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:30:21 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31748585..31748685 1..101 100 -> Plus
3R 31749207..31749521 102..416 100 -> Plus
3R 31749581..31750586 417..1422 100 -> Plus
3R 31750645..31751006 1423..1784 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:03:13 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27574307..27574407 1..101 100 -> Plus
arm_3R 27574929..27575243 102..416 100 -> Plus
arm_3R 27575303..27576308 417..1422 100 -> Plus
arm_3R 27576367..27576728 1423..1784 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:33:57 Download gff for RE43539.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31490038..31490352 102..416 100 -> Plus
3R 31490412..31491417 417..1422 100 -> Plus
3R 31491476..31491837 1423..1784 100   Plus
3R 31489416..31489516 1..101 100 -> Plus

RE43539.pep Sequence

Translation from 170 to 1489

> RE43539.pep
MGGSLELAGGRRTRSSTRGTPTRAAEAVTPPPSKKARTSPASATKASAGK
GRGARKLDVGADEPEPELEKEKEKVQTSVKGKGAVKKDKKEVKKQEKATE
KYAPEEAKEDVAEAKEEDASPAGVQDQPDGVENLPSVAEAKQNHVDEVKP
ISEEPGNSSEEVPKAEEPLKSSGETSENGAATETAAAPKEPASVMDVDED
ETLVENTPSANKEKALDDEKEPEQKSEEHAAAVLESKEQNEPAKEPTPEP
MEVDGSSKGSSDTAQVDTPAIENVSAAPETEAAAKTTESSNDVVEVATEG
KETVLEVPAAEPKEAESTVESAEELTETSTVVVTEPKEAASSEEEPSKVV
DSAEPKEAESNTDESATPVPIDVSTAPASNDVSKPLEIDTTLVKTADSPA
KEPQEICEVKKAEINVNGEPKIVNSSAEVGENAAPKVCN*

RE43539.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:19:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22985-PA 492 GF22985-PA 54..492 1..439 768 56.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:19:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11830-PA 490 GG11830-PA 51..490 1..439 1496 82 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:19:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14197-PA 530 GH14197-PA 59..212 1..149 259 50 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG1910-PC 466 CG1910-PC 28..466 1..439 2186 100 Plus
CG1910-PD 439 CG1910-PD 1..439 1..439 2186 100 Plus
CG1910-PA 489 CG1910-PA 51..489 1..439 2186 100 Plus
PPP4R2r-PD 522 CG2890-PD 127..503 56..434 203 23.3 Plus
PPP4R2r-PC 609 CG2890-PC 214..590 56..434 203 23.3 Plus
PPP4R2r-PB 609 CG2890-PB 214..590 56..434 203 23.3 Plus
PPP4R2r-PA 609 CG2890-PA 214..590 56..434 203 23.3 Plus
tnc-PD 2819 CG13648-PD 2158..2573 30..435 202 23.8 Plus
tnc-PC 2819 CG13648-PC 2158..2573 30..435 202 23.8 Plus
futsch-PF 5495 CG34387-PF 3413..3840 21..414 198 23.2 Plus
futsch-PE 5495 CG34387-PE 3413..3840 21..414 198 23.2 Plus
futsch-PC 5495 CG34387-PC 3413..3840 21..414 198 23.2 Plus
Strn-Mlck-PT 7905 CG44162-PT 4831..5217 34..408 198 23.5 Plus
Strn-Mlck-PV 7944 CG44162-PV 4870..5256 34..408 198 23.5 Plus
Strn-Mlck-PS 8216 CG44162-PS 4831..5217 34..408 198 23.5 Plus
Strn-Mlck-PU 8255 CG44162-PU 4870..5256 34..408 198 23.5 Plus
tnc-PD 2819 CG13648-PD 1242..1636 21..402 193 23.8 Plus
tnc-PC 2819 CG13648-PC 1242..1636 21..402 193 23.8 Plus
Strn-Mlck-PT 7905 CG44162-PT 3921..4325 34..413 191 24.8 Plus
Strn-Mlck-PV 7944 CG44162-PV 3960..4364 34..413 191 24.8 Plus
Strn-Mlck-PS 8216 CG44162-PS 3921..4325 34..413 191 24.8 Plus
Strn-Mlck-PU 8255 CG44162-PU 3960..4364 34..413 191 24.8 Plus
Muc68D-PB 1514 CG6004-PB 646..1065 15..434 189 20.7 Plus
tnc-PD 2819 CG13648-PD 1844..2189 26..405 188 26.7 Plus
tnc-PC 2819 CG13648-PC 1844..2189 26..405 188 26.7 Plus
CG14692-PE 2851 CG14692-PE 1041..1387 70..408 188 25.1 Plus
futsch-PF 5495 CG34387-PF 3542..4021 29..428 184 23.7 Plus
futsch-PE 5495 CG34387-PE 3542..4021 29..428 184 23.7 Plus
futsch-PC 5495 CG34387-PC 3542..4021 29..428 184 23.7 Plus
futsch-PF 5495 CG34387-PF 1963..2398 26..413 183 19.6 Plus
futsch-PF 5495 CG34387-PF 3162..3581 14..414 183 21.4 Plus
futsch-PE 5495 CG34387-PE 1963..2398 26..413 183 19.6 Plus
futsch-PE 5495 CG34387-PE 3162..3581 14..414 183 21.4 Plus
futsch-PC 5495 CG34387-PC 1963..2398 26..413 183 19.6 Plus
futsch-PC 5495 CG34387-PC 3162..3581 14..414 183 21.4 Plus
Muc68D-PB 1514 CG6004-PB 474..892 11..428 182 18.9 Plus
Nopp140-PF 685 CG7421-PF 53..427 70..436 182 21.6 Plus
Nopp140-PB 686 CG7421-PB 53..427 70..436 182 21.6 Plus
Nopp140-PA 720 CG7421-PA 53..427 70..436 182 21.6 Plus
Nopp140-PE 773 CG7421-PE 53..427 70..436 182 21.6 Plus
sls-PY 10625 CG1915-PY 5733..6125 62..405 182 23.9 Plus
sls-PS 15481 CG1915-PS 5733..6125 62..405 182 23.9 Plus
sls-PU 15953 CG1915-PU 5733..6125 62..405 182 23.9 Plus
sls-PV 16146 CG1915-PV 5733..6125 62..405 182 23.9 Plus
sls-PT 18017 CG1915-PT 5733..6125 62..405 182 23.9 Plus
sls-PX 18031 CG1915-PX 5733..6125 62..405 182 23.9 Plus
sls-PR 18117 CG1915-PR 5733..6125 62..405 182 23.9 Plus
sls-PQ 18440 CG1915-PQ 5733..6125 62..405 182 23.9 Plus
sls-PP 18468 CG1915-PP 5733..6125 62..405 182 23.9 Plus
bnb-PD 442 CG7088-PD 40..438 20..363 181 26.9 Plus
bnb-PA 442 CG7088-PA 40..438 20..363 181 26.9 Plus
bnb-PC 442 CG7088-PC 40..438 20..363 181 26.9 Plus
bnb-PB 442 CG7088-PB 40..438 20..363 181 26.9 Plus
Akap200-PE 753 CG13388-PE 40..454 39..431 181 25.8 Plus
Akap200-PA 753 CG13388-PA 40..454 39..431 181 25.8 Plus
Strn-Mlck-PT 7905 CG44162-PT 4311..4715 34..413 178 24.1 Plus
Strn-Mlck-PT 7905 CG44162-PT 4740..5143 23..413 178 21.4 Plus
Strn-Mlck-PV 7944 CG44162-PV 4350..4754 34..413 178 24.1 Plus
Strn-Mlck-PV 7944 CG44162-PV 4779..5182 23..413 178 21.4 Plus
Strn-Mlck-PS 8216 CG44162-PS 4311..4715 34..413 178 24.1 Plus
Strn-Mlck-PS 8216 CG44162-PS 4740..5143 23..413 178 21.4 Plus
Strn-Mlck-PU 8255 CG44162-PU 4350..4754 34..413 178 24.1 Plus
Strn-Mlck-PU 8255 CG44162-PU 4779..5182 23..413 178 21.4 Plus
Muc68D-PB 1514 CG6004-PB 575..965 11..434 178 19.6 Plus
Strn-Mlck-PT 7905 CG44162-PT 4181..4585 34..413 177 23.3 Plus
Strn-Mlck-PV 7944 CG44162-PV 4220..4624 34..413 177 23.3 Plus
Strn-Mlck-PS 8216 CG44162-PS 4181..4585 34..413 177 23.3 Plus
Strn-Mlck-PU 8255 CG44162-PU 4220..4624 34..413 177 23.3 Plus
tnc-PD 2819 CG13648-PD 362..768 67..431 176 23.7 Plus
tnc-PC 2819 CG13648-PC 362..768 67..431 176 23.7 Plus
Strn-Mlck-PT 7905 CG44162-PT 3505..3935 23..413 176 23.1 Plus
Strn-Mlck-PV 7944 CG44162-PV 3544..3974 23..413 176 23.1 Plus
Strn-Mlck-PS 8216 CG44162-PS 3505..3935 23..413 176 23.1 Plus
Strn-Mlck-PU 8255 CG44162-PU 3544..3974 23..413 176 23.1 Plus
ImpE1-PC 1616 CG32356-PC 510..893 38..434 176 24.9 Plus
ImpE1-PA 1616 CG32356-PA 510..893 38..434 176 24.9 Plus
CG13185-PD 5526 CG13185-PD 4593..4996 31..421 176 23.7 Plus
Muc68E-PA 1799 CG33265-PA 854..1237 58..405 175 22.2 Plus
Strn-Mlck-PT 7905 CG44162-PT 4116..4520 34..413 174 24.1 Plus
Strn-Mlck-PV 7944 CG44162-PV 4155..4559 34..413 174 24.1 Plus
Strn-Mlck-PS 8216 CG44162-PS 4116..4520 34..413 174 24.1 Plus
Strn-Mlck-PU 8255 CG44162-PU 4155..4559 34..413 174 24.1 Plus
Nopp140-PF 685 CG7421-PF 115..546 14..434 174 22.5 Plus
Nopp140-PB 686 CG7421-PB 115..546 14..434 174 22.5 Plus
Nopp140-PA 720 CG7421-PA 115..546 14..434 174 22.5 Plus
Nopp140-PE 773 CG7421-PE 115..546 14..434 174 22.5 Plus
Rrp1-PA 679 CG3178-PA 116..407 5..313 174 27.2 Plus
futsch-PF 5495 CG34387-PF 1296..1718 20..418 173 24.7 Plus
futsch-PF 5495 CG34387-PF 2903..3313 24..434 173 21.9 Plus
futsch-PF 5495 CG34387-PF 3657..4044 15..365 173 22.8 Plus
futsch-PE 5495 CG34387-PE 1296..1718 20..418 173 24.7 Plus
futsch-PE 5495 CG34387-PE 2903..3313 24..434 173 21.9 Plus
futsch-PE 5495 CG34387-PE 3657..4044 15..365 173 22.8 Plus
futsch-PC 5495 CG34387-PC 1296..1718 20..418 173 24.7 Plus
futsch-PC 5495 CG34387-PC 2903..3313 24..434 173 21.9 Plus
futsch-PC 5495 CG34387-PC 3657..4044 15..365 173 22.8 Plus
Strn-Mlck-PT 7905 CG44162-PT 4571..4964 34..428 173 21.6 Plus
Strn-Mlck-PV 7944 CG44162-PV 4610..5003 34..428 173 21.6 Plus
Strn-Mlck-PS 8216 CG44162-PS 4571..4964 34..428 173 21.6 Plus
Strn-Mlck-PU 8255 CG44162-PU 4610..5003 34..428 173 21.6 Plus
tnc-PD 2819 CG13648-PD 393..820 15..428 172 24.2 Plus
tnc-PC 2819 CG13648-PC 393..820 15..428 172 24.2 Plus
Sh3beta-PE 485 CG8582-PE 117..435 106..423 172 25.1 Plus
Claspin-PB 1465 CG32251-PB 116..475 62..435 172 20.1 Plus
Claspin-PA 1465 CG32251-PA 116..475 62..435 172 20.1 Plus
Nopp140-PF 685 CG7421-PF 78..457 33..436 171 23.4 Plus
Nopp140-PB 686 CG7421-PB 78..457 33..436 171 23.4 Plus
Nopp140-PA 720 CG7421-PA 78..457 33..436 171 23.4 Plus
Nopp140-PE 773 CG7421-PE 78..457 33..436 171 23.4 Plus
Muc68E-PA 1799 CG33265-PA 611..997 55..405 170 21.1 Plus
sls-PY 10625 CG1915-PY 7436..7860 20..428 169 26.8 Plus
sls-PS 15481 CG1915-PS 12292..12716 20..428 169 26.8 Plus
sls-PU 15953 CG1915-PU 12764..13188 20..428 169 26.8 Plus
sls-PV 16146 CG1915-PV 12957..13381 20..428 169 26.8 Plus
sls-PT 18017 CG1915-PT 14828..15252 20..428 169 26.8 Plus
sls-PX 18031 CG1915-PX 14842..15266 20..428 169 26.8 Plus
sls-PR 18117 CG1915-PR 15251..15675 20..428 169 26.8 Plus
sls-PQ 18440 CG1915-PQ 15251..15675 20..428 169 26.8 Plus
sls-PP 18468 CG1915-PP 15272..15696 20..428 169 26.8 Plus
Sh3beta-PE 485 CG8582-PE 132..468 22..402 169 23.8 Plus
Rrp1-PB 706 CG3178-PB 116..390 5..292 169 27.4 Plus
tn-PC 1517 CG15105-PC 518..882 9..379 169 21.3 Plus
sls-PZ 15155 CG1915-PZ 12289..12713 20..428 169 26.8 Plus
sls-PW 15478 CG1915-PW 12289..12713 20..428 169 26.8 Plus
Strn-Mlck-PT 7905 CG44162-PT 3791..4192 34..436 167 22 Plus
Strn-Mlck-PV 7944 CG44162-PV 3830..4231 34..436 167 22 Plus
Strn-Mlck-PS 8216 CG44162-PS 3791..4192 34..436 167 22 Plus
Strn-Mlck-PU 8255 CG44162-PU 3830..4231 34..436 167 22 Plus
bnb-PD 442 CG7088-PD 104..441 24..357 167 24.5 Plus
bnb-PA 442 CG7088-PA 104..441 24..357 167 24.5 Plus
bnb-PC 442 CG7088-PC 104..441 24..357 167 24.5 Plus
bnb-PB 442 CG7088-PB 104..441 24..357 167 24.5 Plus
tnc-PD 2819 CG13648-PD 1520..1941 28..422 166 21.4 Plus
tnc-PC 2819 CG13648-PC 1520..1941 28..422 166 21.4 Plus
Strn-Mlck-PT 7905 CG44162-PT 3986..4390 34..413 166 23.2 Plus
Strn-Mlck-PV 7944 CG44162-PV 4025..4429 34..413 166 23.2 Plus
Strn-Mlck-PS 8216 CG44162-PS 3986..4390 34..413 166 23.2 Plus
Strn-Mlck-PU 8255 CG44162-PU 4025..4429 34..413 166 23.2 Plus
Muc68D-PB 1514 CG6004-PB 745..1117 15..372 166 18.6 Plus
Muc68E-PA 1799 CG33265-PA 112..421 120..405 166 22.2 Plus
Muc68E-PA 1799 CG33265-PA 286..666 64..402 165 21.7 Plus
Akap200-PG 837 CG13388-PG 91..538 33..431 165 24 Plus
Akap200-PD 837 CG13388-PD 91..538 33..431 165 24 Plus
Strn-Mlck-PT 7905 CG44162-PT 4701..5107 34..413 164 23.3 Plus
Strn-Mlck-PV 7944 CG44162-PV 4740..5146 34..413 164 23.3 Plus
Strn-Mlck-PS 8216 CG44162-PS 4701..5107 34..413 164 23.3 Plus
Strn-Mlck-PU 8255 CG44162-PU 4740..5146 34..413 164 23.3 Plus
Akap200-PE 753 CG13388-PE 147..643 8..434 164 24 Plus
Akap200-PA 753 CG13388-PA 147..643 8..434 164 24 Plus
Muc68D-PB 1514 CG6004-PB 676..1102 11..402 162 19.2 Plus
tnc-PD 2819 CG13648-PD 1671..2074 19..437 161 23 Plus
tnc-PC 2819 CG13648-PC 1671..2074 19..437 161 23 Plus
futsch-PF 5495 CG34387-PF 3805..4233 15..408 161 22.9 Plus
futsch-PE 5495 CG34387-PE 3805..4233 15..408 161 22.9 Plus
futsch-PC 5495 CG34387-PC 3805..4233 15..408 161 22.9 Plus
Strn-Mlck-PT 7905 CG44162-PT 3856..4268 34..414 161 23.6 Plus
Strn-Mlck-PV 7944 CG44162-PV 3895..4307 34..414 161 23.6 Plus
Strn-Mlck-PS 8216 CG44162-PS 3856..4268 34..414 161 23.6 Plus
Strn-Mlck-PU 8255 CG44162-PU 3895..4307 34..414 161 23.6 Plus
Muc68D-PB 1514 CG6004-PB 337..732 13..434 161 18.9 Plus
futsch-PF 5495 CG34387-PF 1736..2138 15..414 159 22.3 Plus
futsch-PE 5495 CG34387-PE 1736..2138 15..414 159 22.3 Plus
futsch-PC 5495 CG34387-PC 1736..2138 15..414 159 22.3 Plus
CG14692-PE 2851 CG14692-PE 1238..1592 15..402 158 21.8 Plus
Strn-Mlck-PT 7905 CG44162-PT 4961..5262 34..347 157 25 Plus
Strn-Mlck-PV 7944 CG44162-PV 5000..5301 34..347 157 25 Plus
Strn-Mlck-PS 8216 CG44162-PS 4961..5262 34..347 157 25 Plus
Strn-Mlck-PU 8255 CG44162-PU 5000..5301 34..347 157 25 Plus
Muc68D-PB 1514 CG6004-PB 173..571 13..405 156 18.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 03:19:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22107-PA 494 GI22107-PA 62..132 1..76 270 72.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:19:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23999-PA 475 GL23999-PA 54..475 1..439 603 49 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:19:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15126-PD 424 GA15126-PD 1..424 1..439 649 48.4 Plus
Dpse\GA15126-PC 477 GA15126-PC 54..477 1..439 649 48.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16450-PA 614 GM16450-PA 51..473 1..427 1578 91.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\anon-EST:fe1A3-PA 484 GD21602-PA 51..484 1..439 1635 91.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 03:19:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24223-PA 486 GJ24223-PA 62..486 1..439 380 36.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:19:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13244-PA 531 GK13244-PA 48..531 1..439 270 36.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:19:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\anon-EST:fe1A3-PA 484 GE10964-PA 51..484 1..439 1367 82.9 Plus

RE43539.hyp Sequence

Translation from 170 to 1489

> RE43539.hyp
MGGSLELAGGRRTRSSTRGTPTRAAEAVTPPPSKKARTSPASATKASAGK
GRGARKLDVGADEPEPELEKEKEKVQTSVKGKGAVKKDKKEVKKQEKATE
KYAPEEAKEDVAEAKEEDASPAGVQDQPDGVENLPSVAEAKQNHVDEVKP
ISEEPGNSSEEVPKAEEPLKSSGETSENGAATETAAAPKEPASVMDVDED
ETLVENTPSANKEKALDDEKEPEQKSEEHAAAVLESKEQNEPAKEPTPEP
MEVDGSSKGSSDTAQVDTPAIENVSAAPETEAAAKTTESSNDVVEVATEG
KETVLEVPAAEPKEAESTVESAEELTETSTVVVTEPKEAASSEEEPSKVV
DSAEPKEAESNTDESATPVPIDVSTAPASNDVSKPLEIDTTLVKTADSPA
KEPQEICEVKKAEINVNGEPKIVNSSAEVGENAAPKVCN*

RE43539.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:13:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG1910-PC 466 CG1910-PC 28..466 1..439 2186 100 Plus
CG1910-PD 439 CG1910-PD 1..439 1..439 2186 100 Plus
CG1910-PA 489 CG1910-PA 51..489 1..439 2186 100 Plus
PPP4R2r-PD 522 CG2890-PD 127..503 56..434 203 23.3 Plus
PPP4R2r-PC 609 CG2890-PC 214..590 56..434 203 23.3 Plus