Clone RE43942 Report

Search the DGRC for RE43942

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:439
Well:42
Vector:pFlc-1
Associated Gene/Transcriptalpha-Man-I-RH
Protein status:RE43942.pep: gold
Preliminary Size:3450
Sequenced Size:3417

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG18799 2002-01-01 Sim4 clustering to Release 2
CG17809 2002-01-01 Sim4 clustering to Release 2
CG32684 2002-06-10 Blastp of sequenced clone
CG4989 2003-01-01 Sim4 clustering to Release 3
CG32684 2003-01-01 Sim4 clustering to Release 3
alpha-Man-I 2008-04-29 Release 5.5 accounting
alpha-Man-I 2008-08-15 Release 5.9 accounting
alpha-Man-I 2008-12-18 5.12 accounting

Clone Sequence Records

RE43942.complete Sequence

3417 bp (3417 high quality bases) assembled on 2002-06-10

GenBank Submission: BT011036

> RE43942.complete
GGAAAAAGCGGCGGGCACATTGTGGATCGGATCCAAGCTGTTTTTGGTCG
TCTCGAACTCAAAAAAAGAAACGTAAATCCAGCGGAATTAAACGCGATTG
TGGAAGGCGTCTCGTTCTTGTGATACCTCTGCCGTGAATCGATGGTCGGT
TTGCGGAAAATAATAAGGTGGCAGGTGAAACGCGCATTCCCCTCTCTCTC
GCACAAACACACCTCCTGCCAGGAACGGAAAGTAACAACAAAAACAACTG
GAAGAAGCGGCTAAGGTGGAAGCGAGATAGAGGTAGCTGGATGGATGCTA
GTGTGGGAAAGGAGAGCGAAGAGAAAGAAACTGAGAAAACATAAACATAA
CTTAAATTAAAAAGTCCACCGCCAATGCCCGAGAAGACTACAGTGAAACA
ATAATACAAATAACCCAAAACAATCAGTTAAATCGAATTGAAGCAAATAA
ACAATCGATCATGTATCGCATCAGTCCAATTGGACGCAAATCGAACTTCC
ACTCGCGCGAAAAATGTCTGATTGGACTCGTCCTGGTAACGTTGTGCTTC
CTCTGCTTCGGCGGCATCTTCCTTCTGCCGGACAATTTCGGCAGCGATCG
TGTCCTGCGCGTCTACAAGCACTTCCGAAAGGCCGGACCGGAGATCTTTA
TCCCAGCCCCGCCCCTCGCCGCACACGCCCCCCATCGCAGCGAGGATCCA
CATTTCATTGGCGATCGCCAACGTTTGGAGCAAAAGATTCGCGCCGAATT
GGGCGATATGCTCGATGAGCCACCGGCTGCGGGTGGAGGCGAACCTGGAC
AATTCCAGGTGCTCGCCCAACAGGCTCAGGCTCCAGCACCCGTCGCCGCT
CTGGCGGATCAGCCGCTGGATCAGGACGAGGGACACGCCGCCATTCCCGT
TCTGGCCGCCCCAGTTCAGGGGGACAATGCCGCCAGCCAGGCCTCGTCCC
ATCCACAAAGTTCCGCCCAGCAGCACAACCAGCAGCAACCACAACTGCCA
TTGGGTGGCGGTGGCAATGATCAGGCGCCGGACACACTGGACGCCACACT
GGAAGAACGGCGTCAGAAGGTCAAAGAGATGATGGAACATGCGTGGCACA
ATTACAAATTGTATGCGTGGGGCAAAAACGAGCTGCGTCCGCTTTCGCAG
CGACCCCATTCGGCCAGTATTTTTGGATCATACGATCTGGGTGCTACAAT
CGTCGACGGTCTGGATACCCTGTACATTATGGGACTGGAGAAGGAATATC
GCGAGGGTCGCGATTGGATCGAGCGAAAATTCTCACTGGACAATATCAGC
GCAGAGTTGAGTGTTTTCGAAACGAACATTCGTTTTGTTGGCGGCATGCT
GACGCTGTACGCCTTTACGGGCGATCCACTGTACAAGGAGAAGGCCCAGC
ACGTTGCCGACAAGCTGCTGCCCGCCTTCCAAACACCAACGGGTATTCCC
TACGCGCTGGTCAACACCAAGACCGGTGTGGCCAAGAACTACGGCTGGGC
ATCCGGCGGCAGTTCTATCCTATCCGAATTTGGCACACTGCATCTGGAAT
TTGCCTATCTGAGCGACATTACCGGGAATCCACTGTATCGGGAACGAGTC
CAGACCATTCGCCAAGTGCTCAAGGAGATCGAGAAACCAAAGGGCCTCTA
TCCCAACTTCCTTAATCCCAAGACAGGCAAATGGGGGCAACTTCACATGT
CATTGGGCGCTCTGGGCGACAGCTACTACGAGTACTTGCTGAAGGCCTGG
CTGCAATCCGGCCAAACGGATGAGGAAGCCCGCGAGATGTTCGACGAGGC
AATGCTGGCCATTCTGGATAAGATGGTCCGCACAAGTCCCGGCGGACTGA
CATACGTCTCTGATCTCAAGTTCGACAGGCTGGAGCATAAGATGGACCAT
TTGGCTTGCTTCTCGGGTGGCCTCTTCGCTTTGGGAGCGGCTACACGTCA
AAATGACTATACGGACAAGTACATGGAGGTGGGCAAGGGCATTACGAATA
CCTGCCACGAGAGCTACATCAGAGCACCCACTCAGCTGGGACCCGAGGCC
TTTAGATTCAGCGAAGCTGTGGAGGCGCGAGCGCTGAGATCGCAGGAGAA
GTACTACATTCTACGGCCAGAGACTTTCGAGAGCTACTTTGTGCTGTGGC
GACTCACGCACGACCAGAAATACCGCGACTGGGGCTGGGAGGCGGTCCTC
GCCCTGGAGAAGCACTGCCGCACGGCGCACGGATATTGTGGCCTGCGCAA
CGTCTACCAGCAGGAGCCGCAAAAGGACGACGTTCAGCAAAGCTTCTTCC
TCGCCGAAACGCTTAAGTACCTGTACTTGCTGTTCTCGGACGATTCGGTG
CTGCCGCTGGACGAATGGGTGTTCAACACGGAGGCCCATCCGCTGCCGAT
CAAGGGTGCGAATGCGTACTATAGACAGGCGCCCGTAACGCTTCCGGTTT
CGAACGCATCGTAAACGGGCGCCATGTTGCGCCGCTGGCTATTCGGCCTG
TCCCTAGCAATGCACCTTACTTAGCTCGCGATATTTGGATATCTACACAT
GTGTGTACCAGATCGTAACATTTTTTTTTTTTTTGTTTTGTTTAAGTTAT
TAGTTAGATTACGTGAGGATGACAACTGCGTACGAAAGATATTGTATGTT
TACAATCAATCCAGGCACACACACACACACACTCGAGAAACTGTCAATGT
AACATATTTATAAAGCTTGCACATATATAGGAACGTAAACTTAAACGGAT
ATATCGTAGTTTAGTTCTTAACTGTTTGCACAAGTTTCTCCAAGTCTCTC
TTCTTGATTTATCTTATGGAATTAATAGCAATCCAAATAGTTGACAGAGG
TGGATGGTGGGAAGACCTCAATTTCCATTTAAATGCGAATGACGTAGACG
TAGGCAAAAACTCTTGATATTAATTATGATATGATATATAATATGATATA
CGTGTAAATGTAAAACTCAGGTGTTCTTATTATGATTTTCCTTGCGCTCA
CACAAGGCACTTTTTCAACTAAACCAGCTACGTAACTATCTCTACAAGCA
TTCTATACGCAATTCTCGATCTGCGACTATATCTCTGTGTGGATTTATGG
CCACTTGGCGGGCATTTCGTTAGATCTACTCTGCTAATTTCCAATTCGAA
TCTTTGACCACTTTATTTTGTATATAATTTCTACTGACTTTCCTCGCAAA
ATGAAGGCAGAAGAAAATCGAATTGATATTTATACAAATATATTCTTACA
CAATATTGTTTACTTTGTAGCCTAAATATTTAAATATAAATCTAATATAG
AGTCTAGCTTACTGTATGTGACGAAAGAAATGTAACGCAAATTACCTTAA
ATCGAGAACATCAAGCGAAAAGAACGCAAATGAATATATATAAAGTAAAA
TAAAAAAAAAAAAAAAA

RE43942.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:50:09
Subject Length Description Subject Range Query Range Score Percent Strand
alpha-Man-I-RJ 3409 alpha-Man-I-RJ 8..3409 1..3401 16955 99.9 Plus
alpha-Man-I.b 4003 alpha-Man-I.b 364..3447 326..3408 15350 99.9 Plus
alpha-Man-I-RM 3960 alpha-Man-I-RM 321..3404 326..3408 15350 99.9 Plus
alpha-Man-I.b 4003 alpha-Man-I.b 1..325 1..325 1625 100 Plus
alpha-Man-I-RM 3960 alpha-Man-I-RM 1..283 1..283 1415 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:52:19
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 10168202..10169288 3401..2316 5385 99.9 Minus
chrX 22417052 chrX 10215037..10215789 1078..326 3765 100 Minus
chrX 22417052 chrX 10170163..10170777 1691..1077 3075 100 Minus
chrX 22417052 chrX 10217104..10217428 325..1 1625 100 Minus
chrX 22417052 chrX 10169345..10169611 2317..2051 1320 99.6 Minus
chrX 22417052 chrX 10169875..10170101 1918..1692 1135 100 Minus
chrX 22417052 chrX 10169676..10169815 2055..1916 700 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:57:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:52:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10276611..10277704 3408..2316 5405 99.8 Minus
X 23542271 X 10323566..10324318 1078..326 3765 100 Minus
X 23542271 X 10278579..10279193 1691..1077 3075 100 Minus
X 23542271 X 10325633..10325957 325..1 1625 100 Minus
X 23542271 X 10277761..10278027 2317..2051 1320 99.6 Minus
X 23542271 X 10278291..10278517 1918..1692 1135 100 Minus
X 23542271 X 10278092..10278231 2055..1916 700 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:22:52
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 10284709..10285802 3408..2316 5415 99.8 Minus
X 23527363 X 10331664..10332416 1078..326 3765 100 Minus
X 23527363 X 10286677..10287291 1691..1077 3075 100 Minus
X 23527363 X 10333731..10334055 325..1 1625 100 Minus
X 23527363 X 10285859..10286125 2317..2051 1320 99.6 Minus
X 23527363 X 10286389..10286615 1918..1692 1135 100 Minus
X 23527363 X 10286190..10286329 2055..1916 700 100 Minus
Blast to na_te.dros performed on 2019-03-15 19:52:18 has no hits.

RE43942.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:53:01 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 10168221..10169286 2318..3382 99 <- Minus
chrX 10169345..10169606 2056..2317 99 <- Minus
chrX 10169676..10169814 1917..2055 100 <- Minus
chrX 10169877..10170101 1692..1916 100 <- Minus
chrX 10170163..10170775 1079..1691 100 <- Minus
chrX 10215037..10215789 326..1078 100 <- Minus
chrX 10217104..10217428 1..325 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:14:04 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
alpha-Man-I-RE 1..2004 461..2464 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:26:01 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
alpha-Man-I-RL 1..2004 461..2464 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:59:50 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
alpha-Man-I-RM 1..2004 461..2464 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:16:28 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
alpha-Man-I-RE 1..2004 461..2464 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:25:46 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
alpha-Man-I-RM 1..2004 461..2464 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:14:03 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
alpha-Man-I-RB 1..3402 1..3401 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:26:00 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
alpha-Man-I-RJ 1..3402 1..3401 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:59:50 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
alpha-Man-I-RJ 1..3402 1..3401 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:16:28 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
alpha-Man-I-RB 1..3402 1..3401 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:25:46 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
alpha-Man-I-RJ 2..3403 1..3401 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:53:01 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
X 10276618..10277702 2318..3401 99 <- Minus
X 10277761..10278022 2056..2317 99 <- Minus
X 10278092..10278230 1917..2055 100 <- Minus
X 10278293..10278517 1692..1916 100 <- Minus
X 10278579..10279191 1079..1691 100 <- Minus
X 10323566..10324318 326..1078 100 <- Minus
X 10325633..10325957 1..325 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:53:01 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
X 10276618..10277702 2318..3401 99 <- Minus
X 10277761..10278022 2056..2317 99 <- Minus
X 10278092..10278230 1917..2055 100 <- Minus
X 10278293..10278517 1692..1916 100 <- Minus
X 10278579..10279191 1079..1691 100 <- Minus
X 10323566..10324318 326..1078 100 <- Minus
X 10325633..10325957 1..325 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:53:01 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
X 10276618..10277702 2318..3401 99 <- Minus
X 10277761..10278022 2056..2317 99 <- Minus
X 10278092..10278230 1917..2055 100 <- Minus
X 10278293..10278517 1692..1916 100 <- Minus
X 10278579..10279191 1079..1691 100 <- Minus
X 10323566..10324318 326..1078 100 <- Minus
X 10325633..10325957 1..325 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:59:50 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10170651..10171735 2318..3401 99 <- Minus
arm_X 10171794..10172055 2056..2317 99 <- Minus
arm_X 10172125..10172263 1917..2055 100 <- Minus
arm_X 10172326..10172550 1692..1916 100 <- Minus
arm_X 10172612..10173224 1079..1691 100 <- Minus
arm_X 10217599..10218351 326..1078 100 <- Minus
arm_X 10219666..10219990 1..325 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:49:47 Download gff for RE43942.complete
Subject Subject Range Query Range Percent Splice Strand
X 10333731..10334055 1..325 100   Minus
X 10284716..10285800 2318..3401 99 <- Minus
X 10285859..10286120 2056..2317 99 <- Minus
X 10286190..10286328 1917..2055 100 <- Minus
X 10286391..10286615 1692..1916 100 <- Minus
X 10286677..10287289 1079..1691 100 <- Minus
X 10331664..10332416 326..1078 100 <- Minus

RE43942.pep Sequence

Translation from 460 to 2463

> RE43942.pep
MYRISPIGRKSNFHSREKCLIGLVLVTLCFLCFGGIFLLPDNFGSDRVLR
VYKHFRKAGPEIFIPAPPLAAHAPHRSEDPHFIGDRQRLEQKIRAELGDM
LDEPPAAGGGEPGQFQVLAQQAQAPAPVAALADQPLDQDEGHAAIPVLAA
PVQGDNAASQASSHPQSSAQQHNQQQPQLPLGGGGNDQAPDTLDATLEER
RQKVKEMMEHAWHNYKLYAWGKNELRPLSQRPHSASIFGSYDLGATIVDG
LDTLYIMGLEKEYREGRDWIERKFSLDNISAELSVFETNIRFVGGMLTLY
AFTGDPLYKEKAQHVADKLLPAFQTPTGIPYALVNTKTGVAKNYGWASGG
SSILSEFGTLHLEFAYLSDITGNPLYRERVQTIRQVLKEIEKPKGLYPNF
LNPKTGKWGQLHMSLGALGDSYYEYLLKAWLQSGQTDEEAREMFDEAMLA
ILDKMVRTSPGGLTYVSDLKFDRLEHKMDHLACFSGGLFALGAATRQNDY
TDKYMEVGKGITNTCHESYIRAPTQLGPEAFRFSEAVEARALRSQEKYYI
LRPETFESYFVLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQ
QEPQKDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVFNTEAHPLPIKGA
NAYYRQAPVTLPVSNAS*

RE43942.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:05:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22633-PA 670 GF22633-PA 1..670 1..667 3078 89.2 Plus
Dana\GF16219-PA 478 GF16219-PA 18..476 201..665 1208 49.6 Plus
Dana\GF21701-PA 464 GF21701-PA 29..451 191..647 840 39.8 Plus
Dana\GF18725-PA 678 GF18725-PA 227..673 199..647 805 38.2 Plus
Dana\GF19471-PA 959 GF19471-PA 40..490 199..649 490 33.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:05:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18934-PA 641 GG18934-PA 85..641 133..667 2536 85.9 Plus
Dere\GG11985-PA 465 GG11985-PA 2..450 201..655 1179 50.3 Plus
Dere\GG18932-PA 206 GG18932-PA 1..205 1..206 898 93.2 Plus
Dere\GG12040-PA 685 GG12040-PA 234..680 199..647 811 38.2 Plus
Dere\GG12667-PA 984 GG12667-PA 40..490 199..649 494 33.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:05:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17781-PA 629 GH17781-PA 64..629 63..667 2423 76.4 Plus
Dgri\GH18910-PA 691 GH18910-PA 241..688 198..647 825 39.3 Plus
Dgri\GH17780-PA 340 GH17780-PA 1..191 1..206 532 56.3 Plus
Dgri\GH17843-PA 995 GH17843-PA 37..492 199..652 468 32.8 Plus
Dgri\GH11090-PA 817 GH11090-PA 52..500 199..650 467 31.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:31
Subject Length Description Subject Range Query Range Score Percent Strand
alpha-Man-Ia-PO 667 CG42275-PO 1..667 1..667 3541 100 Plus
alpha-Man-Ia-PN 667 CG42275-PN 1..667 1..667 3541 100 Plus
alpha-Man-Ia-PM 667 CG42275-PM 1..667 1..667 3541 100 Plus
alpha-Man-Ia-PL 667 CG42275-PL 1..667 1..667 3541 100 Plus
alpha-Man-Ia-PH 667 CG32684-PG 1..667 1..667 3541 100 Plus
alpha-Man-Ia-PJ 667 CG42275-PJ 1..667 1..667 3541 100 Plus
alpha-Man-Ia-PI 684 CG42275-PI 110..684 86..667 2498 84 Plus
alpha-Man-Ia-PP 643 CG42275-PP 156..643 177..667 2491 95.7 Plus
alpha-Man-Ia-PK 643 CG42275-PK 156..643 177..667 2491 95.7 Plus
alpha-Man-Ic-PA 526 CG31202-PA 65..521 194..656 1223 51.2 Plus
alpha-Man-Ib-PA 685 CG11874-PA 150..680 123..647 800 34.7 Plus
Edem1-PD 982 CG3810-PD 40..486 199..645 473 33.2 Plus
Edem1-PA 982 CG3810-PA 40..486 199..645 473 33.2 Plus
Edem1-PB 982 CG3810-PB 40..486 199..645 473 33.2 Plus
Edem1-PC 982 CG3810-PC 40..486 199..645 473 33.2 Plus
Edem1-PE 1004 CG3810-PE 40..486 199..645 473 33.2 Plus
Edem2-PB 792 CG5682-PB 49..494 199..647 460 31.7 Plus
Edem2-PA 801 CG5682-PA 49..494 199..647 460 31.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:05:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15126-PA 656 GI15126-PA 1..656 1..667 2890 84.4 Plus
Dmoj\GI23409-PA 676 GI23409-PA 218..673 190..647 812 38.1 Plus
Dmoj\GI17606-PA 811 GI17606-PA 48..496 199..650 473 32.1 Plus
Dmoj\GI21757-PA 971 GI21757-PA 37..488 199..649 462 32.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:05:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15936-PA 667 GL15936-PA 1..667 1..667 3039 87.3 Plus
Dper\GL13496-PA 482 GL13496-PA 31..478 197..653 1323 53.2 Plus
Dper\GL23057-PA 675 GL23057-PA 137..670 110..647 808 34.4 Plus
Dper\GL18344-PA 972 GL18344-PA 33..487 195..649 488 33.3 Plus
Dper\GL26304-PA 804 GL26304-PA 34..499 185..650 460 31.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:05:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17071-PA 461 GA17071-PA 1..461 207..667 2420 96.7 Plus
Dpse\GA16089-PA 482 GA16089-PA 31..478 197..653 1313 52.7 Plus
Dpse\GA11250-PA 681 GA11250-PA 230..676 199..647 804 38 Plus
Dpse\GA25722-PA 211 GA25722-PA 1..204 1..207 692 71.8 Plus
Dpse\GA17701-PA 972 GA17701-PA 33..487 195..649 488 33.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:05:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11326-PA 647 GM11326-PA 160..647 177..667 2540 95.9 Plus
Dsec\GM12204-PA 516 GM12204-PA 55..511 178..656 1196 49.2 Plus
Dsec\GM11323-PA 256 GM11323-PA 1..205 1..206 1058 96.6 Plus
Dsec\GM12266-PA 685 GM12266-PA 234..680 199..647 818 38.4 Plus
Dsec\GM10224-PA 801 GM10224-PA 49..497 199..650 472 31.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:05:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24646-PA 678 GD24646-PA 315..669 177..534 1799 93.9 Plus
Dsim\GD17544-PA 526 GD17544-PA 70..521 199..656 1218 50.2 Plus
Dsim\GD24646-PA 678 GD24646-PA 1..209 1..214 867 91.6 Plus
Dsim\GD17996-PA 561 GD17996-PA 110..556 199..647 815 38.4 Plus
Dsim\GD23871-PA 801 GD23871-PA 49..497 199..650 470 31.7 Plus
Dsim\GD16401-PA 984 GD16401-PA 40..490 199..649 470 33.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:05:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18983-PA 655 GJ18983-PA 1..655 1..667 2882 84.8 Plus
Dvir\GJ10615-PA 684 GJ10615-PA 28..681 5..647 814 31.2 Plus
Dvir\GJ19135-PA 967 GJ19135-PA 37..489 199..649 471 33.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:06:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25495-PA 665 GK25495-PA 175..653 177..662 2437 92.6 Plus
Dwil\GK18972-PA 477 GK18972-PA 7..477 187..661 1408 54.2 Plus
Dwil\GK22601-PA 1215 GK22601-PA 29..673 18..646 821 32.1 Plus
Dwil\GK22601-PA 1215 GK22601-PA 768..1210 199..646 795 38.1 Plus
Dwil\GK25494-PA 360 GK25494-PA 1..227 1..206 597 60.9 Plus
Dwil\GK14543-PA 811 GK14543-PA 51..499 199..650 469 32.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:06:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15405-PA 669 GE15405-PA 182..669 177..667 2526 95.5 Plus
Dyak\GE15403-PA 302 GE15403-PA 1..211 1..206 825 92.5 Plus
Dyak\GE10478-PA 674 GE10478-PA 223..669 199..647 811 38.4 Plus
Dyak\GE16995-PA 985 GE16995-PA 41..491 199..649 491 33.3 Plus
Dyak\GE18623-PA 801 GE18623-PA 49..497 199..650 471 31.9 Plus

RE43942.hyp Sequence

Translation from 460 to 2463

> RE43942.hyp
MYRISPIGRKSNFHSREKCLIGLVLVTLCFLCFGGIFLLPDNFGSDRVLR
VYKHFRKAGPEIFIPAPPLAAHAPHRSEDPHFIGDRQRLEQKIRAELGDM
LDEPPAAGGGEPGQFQVLAQQAQAPAPVAALADQPLDQDEGHAAIPVLAA
PVQGDNAASQASSHPQSSAQQHNQQQPQLPLGGGGNDQAPDTLDATLEER
RQKVKEMMEHAWHNYKLYAWGKNELRPLSQRPHSASIFGSYDLGATIVDG
LDTLYIMGLEKEYREGRDWIERKFSLDNISAELSVFETNIRFVGGMLTLY
AFTGDPLYKEKAQHVADKLLPAFQTPTGIPYALVNTKTGVAKNYGWASGG
SSILSEFGTLHLEFAYLSDITGNPLYRERVQTIRQVLKEIEKPKGLYPNF
LNPKTGKWGQLHMSLGALGDSYYEYLLKAWLQSGQTDEEAREMFDEAMLA
ILDKMVRTSPGGLTYVSDLKFDRLEHKMDHLACFSGGLFALGAATRQNDY
TDKYMEVGKGITNTCHESYIRAPTQLGPEAFRFSEAVEARALRSQEKYYI
LRPETFESYFVLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQ
QEPQKDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVFNTEAHPLPIKGA
NAYYRQAPVTLPVSNAS*

RE43942.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:17:39
Subject Length Description Subject Range Query Range Score Percent Strand
alpha-Man-I-PO 667 CG42275-PO 1..667 1..667 3541 100 Plus
alpha-Man-I-PN 667 CG42275-PN 1..667 1..667 3541 100 Plus
alpha-Man-I-PM 667 CG42275-PM 1..667 1..667 3541 100 Plus
alpha-Man-I-PL 667 CG42275-PL 1..667 1..667 3541 100 Plus
alpha-Man-I-PH 667 CG32684-PG 1..667 1..667 3541 100 Plus