Clone RE44118 Report

Gene	Date	Evidence
Dsp1-RD	2011-02-22	Manual selection by Sue Celniker

Clone Sequence Records

RE44118.complete Sequence

2369 bp assembled on 2011-03-28

GenBank Submission: BT126193.1

> RE44118.complete
CCCCGTTTGGATTTGGAAGCACAGTGAGAAGGAATAAAAGTGAAAGATAT
AGAACGGAAATCCCAGTATAAAGCCAATCCACGATTGAAACATTCGGACT
AGATCCGAAATCTCACAGTTATGGAACACTTTCATCAAATACAGCAGCAA
TTGGCTGCTCAGCAACAACAACAAGTACAACAGCAACAGTTGCAACAACA
CCAGGTGGTCGTCCAGCAGAATCAGCAGCAGGCGCACCAGAACAGCTCCA
ATACCACAGCCGGCGTGGGCACCCAACAGCTGTTCACATACAAAATGGCC
AGCAGTTTTCCGAATCCGGCCACGACGATGGCCCAAGTGGTGGCCACATC
GAACGCAGCCGGCACCACGGGCTATGATTATCGTCTAAATATGGCACAGG
CAGCCGCAGCAGCAGCCGTACCCGGCTCCCAGTGGTGGTATTCGGCCGCC
AATCAGGGACAGGTCGATGCCAATACAGCGGCGCAACTGCAGCACCAGCA
GCAGCAACAGCAACAGCAACAACAGCAGCAGCAGCAACAGCACCAGCAGC
AACAACAGATGCAACAGCAGCAGCAGCAACAGAATGTCATCAATTCGGCG
AGCCCCATGAGCAGAGTCAAGGCCGATGCCAAGCCCAGAGGCCGAATGAC
CGCCTACGCATACTTTGTACAAACTTGCAGAGAGGAGCACAAAAAGAAAC
ATCCCGATGAGACGGTGATATTCGCCGAATTCTCGCGGAAGTGCGCCGAA
CGGTGGAAGACAATGGTGGACAAGGAGAAGAAGCGCTTCCACGAAATGGC
CGAGAAGGACAAGCAGCGATATGAGGCGGAAATGCAGAACTATGTGCCGC
CCAAGGGAGCGGTTGTGGGACGCGGCAAGAAGAGGAAACAGATCAAGGAC
CCCAATGCTCCAAAACGTTCATTGTCTGCGTTCTTCTGGTTCTGCAATGA
CGAGAGAAATAAGGTGAAGGCACTTAATCCCGAGTTCGGAGTGGGCGACA
TCGCCAAAGAGCTGGGACGAAAGTGGTCCGATGTGGATCCCGAGGTCAAG
CAGAAGTACGAGTCGATGGCCGAGCGGGACAAGGCTCGATATGAACGCGA
GATGACCGAGTACAAGACGAGCGGGAAAATAGCCATGTCCGCACCGTCGA
TGCAGGCGTCGATGCAGGCGCAGGCACAGAAAGCCGCGTTACTTGCCGCC
GCTGCCCAGCAGCAGCACCAGCAGCTGGAAGAGCAGCACGACGACGACGA
CGGCGATGGAGATGATGACGAGAACCAATAGGTTTAGCAGTAAATACTCT
TCACTATTTATACACACGATCGTTGTCGCGATGGAGGAAAGAAACATGAT
AACGTTGGTTGATCTATTATCAGGTTGGCCAATGTGTGTTGAATATAAAT
TTATATATATAAGGGTGTGCCCGCTTTAGAGGTTTCGCTTTCCGGTAACA
GAACACCGTCACAATTTGTTCAGAAATTTGTCTGGAAAAGTTAATATCAA
TCGTATTTTGATCAAAGAATAAGTTAAAAATCATGGTGGAATGGTTAATC
TTTTTTTTTTTTTTTTGTATTCTTTTTAAGCAGTGCGCATAGAGCTCTTT
TGAATCTCTTTTTTCCTTTTTTTTTTTGCATTCATATTTAGCATCTCCGT
ATGAGCGGTGTAACTCTTTTGTATTAGAAATATTTGTGTACCAATCAATG
TCCAACTAAAAATCCAACTATCACAGAAATCTCTTGAACTTTCAGTAGAG
GTTTTCATAGTTAATCGAAGAGAAGAGAAACCATTGTTCCTAGTGCATTT
CGAAAAAAAAAAAACGAAATCTTGTGGAGATTCTGTGAAATTTGAGGATT
TTTTCGTGCGATTTTCATGCCAGCCGTGGGCAAAATGTCTGCAGAAGATT
TCTGTGATTGGAAAAACCAAAGCATAAATTGTTTTGATTTATTTTTTTTT
CTGTGACAATTTGATGATTACCTGGAAGTGGAATCTCTAAGAAAATCACC
TATTATGTATATGTAAATGCATATATATAAATAATATATAATTTTTTTTT
TTAACATAAGTAATCAAATTTCCATGAATTATGAAGATAAATCACAAAGA
AACCTTTTATAAGTTCTATGTTAAGATGAATACGATTAAGTATGGTTAGA
TTAAAATGACACTCAACTGTCTGCGAACCTTATTTGTGCTTCAGTGCTAA
GTTTCTCCCTAAAGTAATAAGAAAGAACTATTTTATAAATTGAAGAAATT
CATCATGATGTCATTCGTTCTCAGCAACTATGAAGGTTACCACTACATTT
ATAAATATTGGTACATATTTCCCATTTATTAAAGTTAGATTCACCATAAT
GAAACAAAAAAAAAAAAAA

RE44118.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:51:18

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chrX	22417052	chrX	16227348..16228604	1099..2355	6160	99.7	Plus
chrX	22417052	chrX	16226006..16226464	142..600	2265	99.6	Plus
chrX	22417052	chrX	16227102..16227277	924..1099	880	100	Plus
chrX	22417052	chrX	16226805..16226972	758..925	840	100	Plus
chrX	22417052	chrX	16226571..16226730	600..759	785	99.4	Plus
chrX	22417052	chrX	16224025..16224139	30..144	560	99.1	Plus

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:51:16

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23542271	X	16337625..16338884	1099..2355	6220	99.8	Plus
X	23542271	X	16336285..16336743	142..600	2295	100	Plus
X	23542271	X	16337381..16337556	924..1099	880	100	Plus
X	23542271	X	16337084..16337251	758..925	840	100	Plus
X	23542271	X	16336850..16337009	600..759	800	100	Plus
X	23542271	X	16334299..16334413	30..144	575	100	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:09:43

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23527363	X	16345723..16346982	1099..2355	6230	99.7	Plus
X	23527363	X	16344383..16344841	142..600	2295	100	Plus
X	23527363	X	16345479..16345654	924..1099	880	100	Plus
X	23527363	X	16345182..16345349	758..925	840	100	Plus
X	23527363	X	16344948..16345107	600..759	800	100	Plus
X	23527363	X	16342397..16342511	30..144	575	100	Plus
X	23527363	X	19552827..19552885	534..476	205	89.8	Minus
X	23527363	X	16341712..16341742	2..32	155	100	Plus

Blast to na_te.dros performed 2019-03-16 22:51:17

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2402..2854	123..584	333	56.8	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2358..2837	133..582	288	58.7	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6755..6886	1165..1293	128	60.2	Plus
gypsy12	10218	gypsy12 GYPSY12 10218bp	1691..1779	1567..1485	116	64.4	Minus
gypsy12	10218	gypsy12 GYPSY12 10218bp	9573..9661	1567..1485	116	64.4	Minus

RE44118.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:52:09 Download gff for RE44118.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chrX	16227102..16227276	924..1098	100	->	Plus
chrX	16223339..16223370	1..31	96	->	Plus
chrX	16224027..16224139	32..144	99	->	Plus
chrX	16226009..16226352	145..488	86	==	Plus
chrX	16226571..16226730	600..759	99	->	Plus
chrX	16226807..16226970	760..923	100	->	Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-28 10:05:30 Download gff for RE44118.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dsp1-RD	1..1161	121..1281	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:59:30 Download gff for RE44118.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dsp1-RD	1..1161	121..1281	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:31:49 Download gff for RE44118.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dsp1-RD	1..1161	121..1281	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-28 10:05:30 Download gff for RE44118.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dsp1-RC	1..32	1..31	96	->	Plus
Dsp1-RC	627..2952	32..2355	99		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:59:30 Download gff for RE44118.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dsp1-RG	1..2359	1..2355	99		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:31:49 Download gff for RE44118.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Dsp1-RG	1..2359	1..2355	99		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:52:09 Download gff for RE44118.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	16333612..16333643	1..31	96	->	Plus
X	16334301..16334413	32..144	100	->	Plus
X	16336288..16336743	145..600	100	->	Plus
X	16336851..16337009	601..759	100	->	Plus
X	16337086..16337249	760..923	100	->	Plus
X	16337381..16337555	924..1098	100	->	Plus
X	16337625..16338884	1099..2355	99		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:52:09 Download gff for RE44118.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	16333612..16333643	1..31	96	->	Plus
X	16334301..16334413	32..144	100	->	Plus
X	16336288..16336743	145..600	100	->	Plus
X	16336851..16337009	601..759	100	->	Plus
X	16337086..16337249	760..923	100	->	Plus
X	16337381..16337555	924..1098	100	->	Plus
X	16337625..16338884	1099..2355	99		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:52:09 Download gff for RE44118.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	16333612..16333643	1..31	96	->	Plus
X	16334301..16334413	32..144	100	->	Plus
X	16336288..16336743	145..600	100	->	Plus
X	16336851..16337009	601..759	100	->	Plus
X	16337086..16337249	760..923	100	->	Plus
X	16337381..16337555	924..1098	100	->	Plus
X	16337625..16338884	1099..2355	99		Plus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:59:30 Download gff for RE44118.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_X	16227645..16227676	1..31	96	->	Plus
arm_X	16228334..16228446	32..144	100	->	Plus
arm_X	16230321..16230776	145..600	100	->	Plus
arm_X	16230884..16231042	601..759	100	->	Plus
arm_X	16231119..16231282	760..923	100	->	Plus
arm_X	16231414..16231588	924..1098	100	->	Plus
arm_X	16231658..16232917	1099..2355	99		Plus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:03:22 Download gff for RE44118.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	16344386..16344841	145..600	100	->	Plus
X	16344949..16345107	601..759	100	->	Plus
X	16345184..16345347	760..923	100	->	Plus
X	16345479..16345653	924..1098	100	->	Plus
X	16345723..16346982	1099..2355	99		Plus
X	16341710..16341741	1..31	96	->	Plus
X	16342399..16342511	32..144	100	->	Plus

RE44118.pep Sequence

Translation from 120 to 1280

> RE44118.pep
MEHFHQIQQQLAAQQQQQVQQQQLQQHQVVVQQNQQQAHQNSSNTTAGVG
TQQLFTYKMASSFPNPATTMAQVVATSNAAGTTGYDYRLNMAQAAAAAAV
PGSQWWYSAANQGQVDANTAAQLQHQQQQQQQQQQQQQQQHQQQQQMQQQ
QQQQNVINSASPMSRVKADAKPRGRMTAYAYFVQTCREEHKKKHPDETVI
FAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVG
RGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGR
KWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQASMQA
QAQKAALLAAAAQQQHQQLEEQHDDDDGDGDDDENQ*

RE44118.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:35:37

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF19115-PA	387	GF19115-PA	1..387	1..386	1981	98.2	Plus
Dana\GF20527-PA	93	GF20527-PA	1..60	282..341	283	88.3	Plus
Dana\GF20526-PA	98	GF20526-PA	1..98	91..205	254	76.7	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:35:40

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG17955-PA	393	GG17955-PA	49..393	42..386	1428	99.4	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:35:46

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH12282-PA	402	GH12282-PA	52..357	42..344	1348	94.8	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:09:53

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsp1-PG	386	CG12223-PG	1..386	1..386	2010	100	Plus
Dsp1-PD	386	CG12223-PD	1..386	1..386	2010	100	Plus
Dsp1-PC	385	CG12223-PC	1..385	1..386	1993	99.7	Plus
Dsp1-PA	385	CG12223-PA	1..385	1..386	1993	99.7	Plus
Dsp1-PB	385	CG12223-PB	1..385	1..386	1993	99.7	Plus
Dsp1-PE	393	CG12223-PE	1..393	1..386	1992	98.2	Plus
Dsp1-PF	397	CG12223-PF	19..397	8..386	1969	100	Plus
Smr-PG	3607	CG4013-PG	67..235	2..154	215	38.6	Plus
CG15740-PB	975	CG15740-PB	388..540	4..155	205	40	Plus
Smr-PF	3601	CG4013-PF	69..246	5..156	199	36.7	Plus
Smr-PE	3601	CG4013-PE	69..246	5..156	199	36.7	Plus
Smr-PD	3601	CG4013-PD	69..246	5..156	199	36.7	Plus
Smr-PF	3601	CG4013-PF	67..244	2..155	195	36.5	Plus
Smr-PE	3601	CG4013-PE	67..244	2..155	195	36.5	Plus
Smr-PD	3601	CG4013-PD	67..244	2..155	195	36.5	Plus
Smr-PG	3607	CG4013-PG	69..266	5..162	193	34.3	Plus
Smr-PG	3607	CG4013-PG	218..393	1..177	192	34.9	Plus
Smr-PF	3601	CG4013-PF	212..387	1..177	192	34.9	Plus
Smr-PE	3601	CG4013-PE	212..387	1..177	192	34.9	Plus
Smr-PD	3601	CG4013-PD	212..387	1..177	192	34.9	Plus
mei-P26-PD	1189	CG12218-PD	558..715	2..164	188	36.4	Plus
mei-P26-PB	1189	CG12218-PB	558..715	2..164	188	36.4	Plus
mei-P26-PA	1189	CG12218-PA	558..715	2..164	188	36.4	Plus
mei-P26-PC	1206	CG12218-PC	558..715	2..164	188	36.4	Plus
mei-P26-PE	1206	CG12218-PE	558..715	2..164	188	36.4	Plus
srp-PB	1249	CG3992-PB	401..558	1..155	184	35.1	Plus
srp-PA	1264	CG3992-PA	401..558	1..155	184	35.1	Plus
srp-PB	1249	CG3992-PB	410..571	2..162	183	33.1	Plus
srp-PA	1264	CG3992-PA	410..571	2..162	183	33.1	Plus
fs(1)h-PB	2038	CG2252-PB	1381..1557	5..156	180	36.5	Plus
fs(1)h-PG	2046	CG2252-PG	1389..1565	5..156	180	36.5	Plus
CG15740-PB	975	CG15740-PB	270..444	2..154	179	37.5	Plus
Mrtf-PD	1495	CG32296-PD	710..893	8..157	179	35.7	Plus
Mrtf-PG	1495	CG32296-PG	710..893	8..157	179	35.7	Plus
Mrtf-PH	1788	CG32296-PH	1003..1186	8..157	179	35.7	Plus
Smr-PG	3607	CG4013-PG	217..365	10..154	178	36.9	Plus
Smr-PF	3601	CG4013-PF	211..359	10..154	178	36.9	Plus
Smr-PE	3601	CG4013-PE	211..359	10..154	178	36.9	Plus
Smr-PD	3601	CG4013-PD	211..359	10..154	178	36.9	Plus
srp-PB	1249	CG3992-PB	404..575	2..174	176	31.3	Plus
srp-PA	1264	CG3992-PA	404..575	2..174	176	31.3	Plus
Mrtf-PD	1495	CG32296-PD	716..889	6..154	176	36.3	Plus
Mrtf-PG	1495	CG32296-PG	716..889	6..154	176	36.3	Plus
Mrtf-PH	1788	CG32296-PH	1009..1182	6..154	176	36.3	Plus
Trl-PF	582	CG33261-PF	428..582	6..156	176	38.2	Plus
Trl-PA	582	CG33261-PA	428..582	6..156	176	38.2	Plus
Trl-PK	623	CG33261-PK	469..623	6..156	176	38.2	Plus
CG10631-PA	3781	CG10631-PA	28..242	16..206	176	31.3	Plus
CG15740-PB	975	CG15740-PB	268..420	6..157	173	36.2	Plus
CG17233-PI	772	CG17233-PI	70..267	22..239	173	26.8	Plus
CG17233-PD	772	CG17233-PD	70..267	22..239	173	26.8	Plus
CG17233-PA	1173	CG17233-PA	70..267	22..239	173	26.8	Plus
Ssrp-PA	723	CG4817-PA	521..674	218..384	172	29.2	Plus
Dsp1-PF	397	CG12223-PF	6..252	111..331	171	23.4	Plus
fkh-PC	692	CG10002-PC	523..666	2..184	170	32.8	Plus
CG16711-PC	1497	CG16711-PC	1277..1418	6..154	170	36.6	Plus
Trl-PF	582	CG33261-PF	456..579	2..146	168	37	Plus
Trl-PF	582	CG33261-PF	418..580	6..153	168	36.7	Plus
Trl-PA	582	CG33261-PA	456..579	2..146	168	37	Plus
Trl-PA	582	CG33261-PA	418..580	6..153	168	36.7	Plus
Trl-PK	623	CG33261-PK	459..621	6..153	168	36.7	Plus
Trl-PK	623	CG33261-PK	497..620	2..146	168	37	Plus
dy-PA	699	CG9355-PA	92..223	8..152	168	38.4	Plus
CG32532-PD	688	CG32532-PD	108..240	12..159	167	36.5	Plus
CG43689-PF	1251	CG43689-PF	730..851	6..166	167	37.3	Plus
CG43689-PD	1309	CG43689-PD	788..909	6..166	167	37.3	Plus
CG43689-PC	1332	CG43689-PC	811..932	6..166	167	37.3	Plus
CG43689-PH	1618	CG43689-PH	700..821	6..166	167	37.3	Plus
CG43689-PI	1648	CG43689-PI	730..851	6..166	167	37.3	Plus
CG43689-PG	1648	CG43689-PG	730..851	6..166	167	37.3	Plus
CG43689-PE	1706	CG43689-PE	788..909	6..166	167	37.3	Plus
Dsp1-PF	397	CG12223-PF	125..342	6..241	166	23.2	Plus
CG17233-PI	772	CG17233-PI	252..431	5..180	166	33.5	Plus
CG17233-PD	772	CG17233-PD	252..431	5..180	166	33.5	Plus
CG17233-PA	1173	CG17233-PA	252..431	5..180	166	33.5	Plus
CG17233-PH	1006	CG17233-PH	521..700	5..180	166	33.5	Plus
CG17233-PE	1007	CG17233-PE	522..701	5..180	166	33.5	Plus
CG17233-PG	1443	CG17233-PG	522..701	5..180	166	33.5	Plus
CG17233-PF	1464	CG17233-PF	543..722	5..180	166	33.5	Plus
CG17233-PC	1465	CG17233-PC	70..283	22..257	166	25.3	Plus
CG17233-PC	1465	CG17233-PC	544..723	5..180	166	33.5	Plus
CG3638-PH	1136	CG3638-PH	744..872	7..158	164	35.5	Plus
CG3638-PL	1224	CG3638-PL	832..960	7..158	164	35.5	Plus
CG3638-PG	1472	CG3638-PG	832..960	7..158	164	35.5	Plus
CG17233-PF	1464	CG17233-PF	70..282	22..257	163	24.8	Plus
CG17233-PH	1006	CG17233-PH	70..207	22..157	162	34.1	Plus
CG17233-PE	1007	CG17233-PE	70..207	22..157	162	34.1	Plus
CG17233-PG	1443	CG17233-PG	70..207	22..157	162	34.1	Plus
Ssrp-PA	723	CG4817-PA	506..648	108..266	156	25.9	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:35:52

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI10980-PA	402	GI10980-PA	52..355	42..344	1354	96.1	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:35:56

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL15829-PA	173	GL15829-PA	1..130	215..344	707	98.5	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:36:01

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA11488-PA	393	GA11488-PA	49..350	42..344	1385	96.1	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:36:04

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM13428-PA	807	GM13428-PA	49..128	42..121	389	100	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:36:07

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD17278-PA	393	GD17278-PA	49..393	42..386	1428	99.4	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:36:12

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ19445-PA	403	GJ19445-PA	52..358	42..344	1366	95.1	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:36:17

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK25058-PA	406	GK25058-PA	51..359	41..344	1328	94.2	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:36:20

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE17263-PA	394	GE17263-PA	49..394	42..386	1415	99.1	Plus

RE44118.hyp Sequence

Translation from 120 to 1280

> RE44118.hyp
MEHFHQIQQQLAAQQQQQVQQQQLQQHQVVVQQNQQQAHQNSSNTTAGVG
TQQLFTYKMASSFPNPATTMAQVVATSNAAGTTGYDYRLNMAQAAAAAAV
PGSQWWYSAANQGQVDANTAAQLQHQQQQQQQQQQQQQQQHQQQQQMQQQ
QQQQNVINSASPMSRVKADAKPRGRMTAYAYFVQTCREEHKKKHPDETVI
FAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVG
RGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGR
KWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQASMQA
QAQKAALLAAAAQQQHQQLEEQHDDDDGDGDDDENQ*

RE44118.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:17:26

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsp1-PG	386	CG12223-PG	1..386	1..386	2010	100	Plus
Dsp1-PD	386	CG12223-PD	1..386	1..386	2010	100	Plus
Dsp1-PC	385	CG12223-PC	1..385	1..386	1993	99.7	Plus
Dsp1-PA	385	CG12223-PA	1..385	1..386	1993	99.7	Plus
Dsp1-PB	385	CG12223-PB	1..385	1..386	1993	99.7	Plus

Library:	RE
Tissue Source:	Drosophila melanogaster embryo
Created by:	Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:	2000-10-23
Comments:	Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:	441
Well:	18
Vector:	pFlc-1
Associated Gene/Transcript	Dsp1-RD
Protein status:	RE44118.pep: gold
Sequenced Size:	2369

Clone RE44118 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

RE44118.complete Sequence

RE44118.complete Blast Records

RE44118.complete Sim4 Records

RE44118.pep Sequence

RE44118.pep Blast Records

RE44118.hyp Sequence

RE44118.hyp Blast Records