BDGP Sequence Production Resources |
Search the DGRC for RE44178
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 441 |
Well: | 78 |
Vector: | pFlc-1 |
Associated Gene/Transcript | fz3-RA |
Protein status: | RE44178.pep: gold |
Preliminary Size: | 2301 |
Sequenced Size: | 2262 |
Gene | Date | Evidence |
---|---|---|
CG16785 | 2002-01-01 | Sim4 clustering to Release 2 |
CG16785 | 2002-06-07 | Blastp of sequenced clone |
CG16785 | 2003-01-01 | Sim4 clustering to Release 3 |
fz3 | 2008-04-29 | Release 5.5 accounting |
fz3 | 2008-08-15 | Release 5.9 accounting |
fz3 | 2008-12-18 | 5.12 accounting |
2262 bp (2262 high quality bases) assembled on 2002-06-07
GenBank Submission: AY119641
> RE44178.complete AGTTTGTTGGAAACAGTGAAGAGTAGTGGTCGCGTTTCGCAGTTCTTGGA GTGGAGACTTTCCAAACCGGAGAAATACGTAAACCACTGAGAGTCGCACA GTAATATAAACACAAACATTTTTTTACGTGCCGCGAGTGACGTTTGAACA GAAACCCTGGAGTGGCAAACATGACCTCCTGAAACCCACTAAGCATCGCA ATGTATGCCGCCTCGATCCTGATCCTGCACCTGACTTGGGCCGTGGCCAC GATCGCGGCCAACGGTGCCGGCCATAATGGCCCGGTGGCATCCGGAGCAG GGCCTAACGGATTGCAGTGCCAGCCCATCGCCGTGTCCGCCTGCCAAGGC CTCGGCTACAACATGACCGCACTGCCCAACCTGGCAGGTCACACCAATCA GCTGGAGGCTGAGCTCCAGATTGCCAAACTGGTGCCACTAATAGAATCCG GCTGCTCGCGTCGCGCCCGCTTTTTGCTCTGCTCGTCTCTGTTTCCGCTG TGCACGCCGGATGTGCCACGCCCCGTTGCCGCCTGCAAATTGCTGTGCGA GACTGTTAGGGGCGAGTGTATGGAAAACGCTCCGCCGGAACTGATGGAGC TGTGGCCTTCGTTCCTTAACTGCGACGGACTGCCGCAGCCGGAGAAGCAC GAGTTGTGCATGCAGATTCCACAGGAGGTGGCTGTGCCAGGCGGGAGTCC AAGTGGTCCGCCCACCACTGGTTCACCTGGCGTCGAAGATCACCCGCAGA CGTACCGCTTTTGGAAAAGCGGAGCATCTCCCACCTCTGACTTGGCTGGC GTCTTGTGCCCGCAAAACTTTAGCGGCAGTCCCTTTAATCCGGAGGAGTG CGTGCCCCAGTGTCAGCGGGACGCCTTCCACACGAGCTCTCAGAAGAAGA CGTCTGAGACCCTCATTCTAGGCCTCTCGGCCGTCTGCTTCGTCCTGACA CTGTTCGCCTTGGTGACCTTCTGGGCGGAGCCCACCAGGTTTGGCTACCC CGAGAGACCAGTGCTCTTCCTGTGCCTGTGCTACAACCTCTTCAGCGTGT GCTATCTGGAGCGAATCGTGTTCCACAATCAAGCAAGGATGCATGACGTC GAGCTGCAATGGCGGCTGATGCGACCGGGTTGCTTGCTGACGCCCCCTTG CCTGGCCTCCTACATAACCACCTCCTATTTAAGCCTGTGTGCAGCCAGCT GGTGGCTGATATTTGCCCTGTGCTTCTACCTGTCCTCCCACAAAAAGTGG TCCAGCGAGGCGCTGGAAAAGAGGTCCGGGCTGTTCCACGTTCTGGCCTG GGTGCCACCGCTGGCGCCCCCCATTGCCGCCCTGCTGCTGGAGAAGGTGC GTCCGAGTGAGCTGACTGGGATGTGCTACGCACCGGGATTTGTGGAGCTG CCAGCACTGGTCCTGCTCCTGCTTGGGCTGTACTTCACCCTGAGAGCCTC CAGGTCTCTGCTCTCCCTGCAGCAACAGTTGCAGCCCACCCTGGCCCACC ACCGATTCGGGCAGATCCGGAAGCGCTTTGTGCTCTTCTCCCTGCTGTAC TTCGCACCCACGACCGCCGGCGTCGTGGCGGCTCTTTGCGAGCGGTACGC GGATTCAGTGCCCAGCTGCTCCACACCCGATGACTGCCTCTCACCCACTC CGCTCAGTGCCTGGCCAGCGTTGGTCCGGATCTTCTTCCAGCTGGTGGGC GGAACGTTGACAGGGTTGTGGGTGTGGTCGCGCAAAACCTGCGAGAGCTA CAGAAATCGGCTGGGTGCCAGCGGCACACCCACCTCATCCCTGATGAATC AAAGCAAGGCGGCCGGGGCTTTGCCCAAAAAGCATTTGTATACGAGTGGG AAATCCATGCTGCCCACGGGGGGAATCACTCCTCTATATGCTGGTATTAG TTTTCACAATGTGCCCGTCTACAACCCCAACCAATCGAGAGTTTAGGGGA TCTTTTAGCCCACATGGGGGGCTCTAGAAAAATCTCGAACTCTACTATTG TACATATAACATATACATACATCATAGAAGGCTTTGAGCCGCGGTGAGAG AACATGATCGAACATACGCCTAGTTTTTAAGCCCGAAAAGGAGAAACTGA AATGTGTTAATAGCTTTATAGATCGCGCTCCCCCAAGTACCCATCACCTC CAGTTTTTATTAGTAGTTCTCTAGCTAGTCCTAAGCCTGTAAATAGTAAA ACGTTTTATTCATAGTAGAATGAATTGTAAATAAATTATATGAACCAAAA AAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 664003..664422 | 1..419 | 99 | -> | Plus |
chrX | 675457..677283 | 420..2246 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fz3-RA | 1..1746 | 201..1946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fz3-RA | 1..1746 | 201..1946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fz3-RA | 1..1746 | 201..1946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fz3-RA | 1..1746 | 201..1946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fz3-RA | 1..1746 | 201..1946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fz3-RA | 1..2247 | 1..2246 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fz3-RA | 1..2247 | 1..2246 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fz3-RA | 3..2249 | 1..2246 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fz3-RA | 1..2247 | 1..2246 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fz3-RA | 3..2249 | 1..2246 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 770028..770447 | 1..419 | 99 | -> | Plus |
X | 781476..783302 | 420..2246 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 770028..770447 | 1..419 | 99 | -> | Plus |
X | 781476..783302 | 420..2246 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 770028..770447 | 1..419 | 99 | -> | Plus |
X | 781476..783302 | 420..2246 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 664061..664480 | 1..419 | 99 | -> | Plus |
arm_X | 675509..677335 | 420..2246 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 778126..778545 | 1..419 | 99 | -> | Plus |
X | 789574..791400 | 420..2246 | 99 | Plus |
Translation from 200 to 1945
> RE44178.pep MYAASILILHLTWAVATIAANGAGHNGPVASGAGPNGLQCQPIAVSACQG LGYNMTALPNLAGHTNQLEAELQIAKLVPLIESGCSRRARFLLCSSLFPL CTPDVPRPVAACKLLCETVRGECMENAPPELMELWPSFLNCDGLPQPEKH ELCMQIPQEVAVPGGSPSGPPTTGSPGVEDHPQTYRFWKSGASPTSDLAG VLCPQNFSGSPFNPEECVPQCQRDAFHTSSQKKTSETLILGLSAVCFVLT LFALVTFWAEPTRFGYPERPVLFLCLCYNLFSVCYLERIVFHNQARMHDV ELQWRLMRPGCLLTPPCLASYITTSYLSLCAASWWLIFALCFYLSSHKKW SSEALEKRSGLFHVLAWVPPLAPPIAALLLEKVRPSELTGMCYAPGFVEL PALVLLLLGLYFTLRASRSLLSLQQQLQPTLAHHRFGQIRKRFVLFSLLY FAPTTAGVVAALCERYADSVPSCSTPDDCLSPTPLSAWPALVRIFFQLVG GTLTGLWVWSRKTCESYRNRLGASGTPTSSLMNQSKAAGALPKKHLYTSG KSMLPTGGITPLYAGISFHNVPVYNPNQSRV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21196-PA | 604 | GF21196-PA | 9..604 | 6..581 | 2160 | 76.5 | Plus |
Dana\GF24601-PA | 581 | GF24601-PA | 48..563 | 35..519 | 423 | 26.4 | Plus |
Dana\GF10777-PA | 695 | GF10777-PA | 298..655 | 218..557 | 363 | 28.6 | Plus |
Dana\GF20940-PA | 753 | GF20940-PA | 101..621 | 39..544 | 296 | 23.6 | Plus |
Dana\GF10777-PA | 695 | GF10777-PA | 64..182 | 39..157 | 217 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12809-PA | 584 | GG12809-PA | 1..584 | 1..581 | 2887 | 94.7 | Plus |
Dere\GG15682-PA | 581 | GG15682-PA | 48..563 | 35..519 | 423 | 26.4 | Plus |
Dere\GG13420-PA | 694 | GG13420-PA | 297..654 | 218..557 | 363 | 28.6 | Plus |
Dere\GG17634-PA | 705 | GG17634-PA | 45..346 | 39..343 | 267 | 27 | Plus |
Dere\GG13420-PA | 694 | GG13420-PA | 60..181 | 35..157 | 225 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17662-PA | 659 | GH17662-PA | 28..659 | 27..581 | 1982 | 66.8 | Plus |
Dgri\GH17099-PA | 583 | GH17099-PA | 47..565 | 35..519 | 429 | 26 | Plus |
Dgri\GH16736-PA | 703 | GH16736-PA | 307..663 | 215..557 | 371 | 28.8 | Plus |
Dgri\GH24301-PA | 721 | GH24301-PA | 64..444 | 39..393 | 278 | 25.8 | Plus |
Dgri\GH16736-PA | 703 | GH16736-PA | 80..201 | 35..157 | 219 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fz3-PC | 581 | CG16785-PC | 1..581 | 1..581 | 3118 | 100 | Plus |
fz3-PA | 581 | CG16785-PA | 1..581 | 1..581 | 3118 | 100 | Plus |
fz3-PB | 646 | CG16785-PB | 138..646 | 73..581 | 2741 | 100 | Plus |
fz2-PG | 694 | CG9739-PG | 45..654 | 19..557 | 550 | 27.5 | Plus |
fz2-PE | 694 | CG9739-PE | 45..654 | 19..557 | 550 | 27.5 | Plus |
fz2-PD | 694 | CG9739-PD | 45..654 | 19..557 | 550 | 27.5 | Plus |
fz2-PC | 694 | CG9739-PC | 45..654 | 19..557 | 550 | 27.5 | Plus |
fz2-PA | 694 | CG9739-PA | 45..654 | 19..557 | 550 | 27.5 | Plus |
fz2-PB | 694 | CG9739-PB | 45..654 | 19..557 | 550 | 27.5 | Plus |
fz2-PF | 806 | CG9739-PF | 45..654 | 19..557 | 550 | 27.5 | Plus |
fz-PA | 581 | CG17697-PA | 48..563 | 35..519 | 469 | 25.8 | Plus |
fz-PC | 612 | CG17697-PC | 48..563 | 35..519 | 469 | 25.8 | Plus |
fz4-PA | 705 | CG4626-PA | 12..584 | 6..540 | 335 | 23.2 | Plus |
fz4-PB | 705 | CG4626-PB | 12..584 | 6..540 | 335 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11128-PA | 626 | GI11128-PA | 41..626 | 35..581 | 2139 | 74.3 | Plus |
Dmoj\GI11701-PA | 581 | GI11701-PA | 49..563 | 35..519 | 446 | 26.4 | Plus |
Dmoj\GI13462-PA | 717 | GI13462-PA | 293..650 | 218..557 | 377 | 29.1 | Plus |
Dmoj\GI11047-PA | 728 | GI11047-PA | 43..561 | 39..521 | 283 | 23.3 | Plus |
Dmoj\GI13462-PA | 717 | GI13462-PA | 69..187 | 39..157 | 220 | 36.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26757-PA | 639 | GL26757-PA | 10..639 | 7..581 | 2065 | 70.4 | Plus |
Dper\GL20917-PA | 701 | GL20917-PA | 304..661 | 218..557 | 362 | 28.6 | Plus |
Dper\GL21009-PA | 395 | GL21009-PA | 33..300 | 21..286 | 294 | 30.3 | Plus |
Dper\GL14637-PA | 740 | GL14637-PA | 51..358 | 39..343 | 274 | 27.3 | Plus |
Dper\GL20917-PA | 701 | GL20917-PA | 59..191 | 24..157 | 221 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14147-PA | 659 | GA14147-PA | 238..659 | 197..581 | 1614 | 78.7 | Plus |
Dpse\GA14615-PA | 584 | GA14615-PA | 33..566 | 21..519 | 438 | 26.7 | Plus |
Dpse\GA21999-PA | 698 | GA21999-PA | 301..658 | 218..557 | 362 | 28.6 | Plus |
Dpse\GA18313-PA | 743 | GA18313-PA | 47..358 | 35..343 | 276 | 27.3 | Plus |
Dpse\GA21999-PA | 698 | GA21999-PA | 57..189 | 24..157 | 221 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19089-PA | 688 | GM19089-PA | 181..688 | 74..581 | 2635 | 97.8 | Plus |
Dsec\GM25464-PA | 581 | GM25464-PA | 39..563 | 30..519 | 427 | 26.5 | Plus |
Dsec\GM14888-PA | 694 | GM14888-PA | 297..654 | 218..557 | 362 | 28.6 | Plus |
Dsec\GM19089-PA | 688 | GM19089-PA | 1..77 | 1..75 | 342 | 89.6 | Plus |
Dsec\GM17477-PA | 557 | GM17477-PA | 45..245 | 39..248 | 259 | 32.7 | Plus |
Dsec\GM14888-PA | 694 | GM14888-PA | 60..181 | 35..157 | 225 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16528-PA | 510 | GD16528-PA | 41..510 | 74..581 | 2370 | 90.7 | Plus |
Dsim\GD14489-PA | 415 | GD14489-PA | 39..404 | 30..384 | 375 | 28.7 | Plus |
Dsim\GD12297-PA | 693 | GD12297-PA | 296..653 | 218..557 | 362 | 28.6 | Plus |
Dsim\GD16161-PA | 652 | GD16161-PA | 2..294 | 48..343 | 245 | 25.4 | Plus |
Dsim\GD12297-PA | 693 | GD12297-PA | 60..181 | 35..157 | 225 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19053-PA | 619 | GJ19053-PA | 1..619 | 1..581 | 2126 | 72.4 | Plus |
Dvir\fz-PA | 580 | GJ11377-PA | 48..562 | 35..519 | 441 | 26.2 | Plus |
Dvir\GJ11825-PA | 682 | GJ11825-PA | 286..642 | 215..557 | 373 | 28.8 | Plus |
Dvir\GJ17044-PA | 702 | GJ17044-PA | 43..548 | 39..521 | 319 | 25.5 | Plus |
Dvir\GJ11825-PA | 682 | GJ11825-PA | 60..181 | 35..157 | 214 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20092-PA | 614 | GK20092-PA | 43..614 | 33..581 | 1809 | 64.7 | Plus |
Dwil\GK12696-PA | 591 | GK12696-PA | 37..573 | 15..519 | 460 | 26.8 | Plus |
Dwil\GK12461-PA | 701 | GK12461-PA | 304..661 | 218..557 | 373 | 28.8 | Plus |
Dwil\GK25820-PA | 676 | GK25820-PA | 40..550 | 39..521 | 309 | 23.9 | Plus |
Dwil\GK12461-PA | 701 | GK12461-PA | 68..189 | 35..157 | 222 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16636-PA | 589 | GE16636-PA | 1..589 | 1..581 | 2700 | 93.2 | Plus |
Dyak\GE22012-PA | 581 | GE22012-PA | 48..563 | 35..519 | 424 | 26.4 | Plus |
Dyak\GE22913-PA | 609 | GE22913-PA | 212..569 | 218..557 | 361 | 28.6 | Plus |
Dyak\GE17540-PA | 708 | GE17540-PA | 47..348 | 39..343 | 283 | 26.4 | Plus |
Translation from 200 to 1945
> RE44178.hyp MYAASILILHLTWAVATIAANGAGHNGPVASGAGPNGLQCQPIAVSACQG LGYNMTALPNLAGHTNQLEAELQIAKLVPLIESGCSRRARFLLCSSLFPL CTPDVPRPVAACKLLCETVRGECMENAPPELMELWPSFLNCDGLPQPEKH ELCMQIPQEVAVPGGSPSGPPTTGSPGVEDHPQTYRFWKSGASPTSDLAG VLCPQNFSGSPFNPEECVPQCQRDAFHTSSQKKTSETLILGLSAVCFVLT LFALVTFWAEPTRFGYPERPVLFLCLCYNLFSVCYLERIVFHNQARMHDV ELQWRLMRPGCLLTPPCLASYITTSYLSLCAASWWLIFALCFYLSSHKKW SSEALEKRSGLFHVLAWVPPLAPPIAALLLEKVRPSELTGMCYAPGFVEL PALVLLLLGLYFTLRASRSLLSLQQQLQPTLAHHRFGQIRKRFVLFSLLY FAPTTAGVVAALCERYADSVPSCSTPDDCLSPTPLSAWPALVRIFFQLVG GTLTGLWVWSRKTCESYRNRLGASGTPTSSLMNQSKAAGALPKKHLYTSG KSMLPTGGITPLYAGISFHNVPVYNPNQSRV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fz3-PC | 581 | CG16785-PC | 1..581 | 1..581 | 3118 | 100 | Plus |
fz3-PA | 581 | CG16785-PA | 1..581 | 1..581 | 3118 | 100 | Plus |
fz3-PB | 646 | CG16785-PB | 138..646 | 73..581 | 2741 | 100 | Plus |
fz2-PG | 694 | CG9739-PG | 45..654 | 19..557 | 550 | 27.5 | Plus |
fz2-PE | 694 | CG9739-PE | 45..654 | 19..557 | 550 | 27.5 | Plus |