BDGP Sequence Production Resources |
Search the DGRC for RE44586
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 445 |
Well: | 86 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11210-RA |
Protein status: | RE44586.pep: gold |
Preliminary Size: | 2427 |
Sequenced Size: | 2878 |
Gene | Date | Evidence |
---|---|---|
CG11210 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11210 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11210 | 2003-08-12 | Blastp of sequenced clone |
CG11210 | 2008-04-29 | Release 5.5 accounting |
CG11210 | 2008-08-15 | Release 5.9 accounting |
CG11210 | 2008-12-18 | 5.12 accounting |
2878 bp (2878 high quality bases) assembled on 2003-08-12
GenBank Submission: BT011035
> RE44586.complete ATCGATAACAGCCAGCAAAATGAAGTAAAGTAGCGAAAGGCAATTATTCC ATATACCTTTTACGACACAGGTTGCTTTTATTGATGAACACGATTGAGGA TATTAAAGGCTGATGTTTAATGTGAAGCTTCGCAAAATAAGTTACTGGAA ATAAAACATTTCACCTAAGTGAAATTCATGGTCATGTCGGAAAACAGCAA CATTTCCTACTGCCAGGCGGTGGCCAATCGCACTTCGTTCTTTACCACCG CCTATAATGGCATTCCGGAAACCCTAATACTCAACACCATTTTCTGGGTA CTCCTGATCCTTTTGTTTACGGTTCTGCGGCACCAGGCCGGTGACTTTGG ACGTCTAGCGCTGGTCAACAGCAACGGCAGCAAGAAGCGCTGGACGGAGA TTTTCTACTCGCGCGCCGCCAGTGTGGTCGATCCCCAGCCGAGCACTTCA ACGCAGGTATCGCCTAGACCAAGTACCACCTCCCAAGGAGTTCCCGACTC CACGCCCTTGTCCCCTATCCAGCCGGAGGAGGGGCTTTTCGGCTGGATAC GGGTTACGCTGAAGCTGCGTAAGGAGACCATACTGCTGCATACTGGACCG GATGCCGTGCATTACTTGTCCTTTCAGCAGCACCTGATGGCTGTAATGGC ATTGGTTACCATAGTCTCCCTGGTCATTATTCTGCCTGTGAATTTCCTGA ACGGGCCCAAGGAAAATCCGTACGATGTGAATGCCTTCGGACGCACCACG ATGGCGAATCTTTCTCCGGATTCACCTTGGCTGTGGGTGCACACGATCAT CACGATTCTGTATATTCCGCTCGTAGTGCTCATCATGCGGCGCGCCTCGG GACGGAATGCCTTCAAAAAGGCAGCCACCCGCACGATTATGATTTCAAAC ATATCCTCCAGCGATCGCAACAAGACTGTGGTACGGAACTATATGCAGGA GCTCTTTCCGGACGTCACCATCGAGAATGTGTCAATTGCGTACAACATTT CACGACTATACGTAAGGAACGCCGAGTTCGAGCGAGTTCATGAAGCACGA TTGTACTGCGAGCACCATAGGAACAGGGATACTCTCATGGTTAAACCAGA AATGTGTTCCTGCAAAAAGGAGAACGCCTACGAATATTATCAGCGAGAGG AGCGCAAGTTGTCCGGCGATGTTGCCCGTCTGCGTGCTTCCACCATGAAT GAGCCCCTGGACATTGCGTTTATCACCGTGTCCACTGTGCAGGAGGCCCA GAACATAGTAACGCACTTTACACCGGGCACCTACCGCCAATGGCACTTGG TGTTCGCTCCGTCGCCTGATGATCTTTTTTGGGAGAACCTAAATGTGAAT AAGAGTCATTGGTACTTGAAATTCTTCTGTGTGAATGCAGTGCTTTTTCT TGTTCTCTTCTTCCTGTCCACACCGGCCATGGTGGTAAGCCTTCTAAACA GTCGACCATGGGTAAAGGAAACAGAGGGTAAGATCTCGCCCCTCGTTGCC GACTTCCTGCCCACATTGATGCTCTGGACTCTTTCGGCTCTAATGCCTGT GATTGTTGCCATTTCGGACAAGTGGATGCGGCACTACACGCGCTCCAAGC AGAACTACTCAATCATGACGAAGTGCTTTGGCTATCTGCTTATGATGATC ATGATTCTGCCTTCCCTCGGACTGACATCGGCACAGGCGCTGCTAGAGTG GGGATTCTTAAATCAGACTGATCGCTGGCAGTGCATTTTCCTGCCGGATC GCGGCTCCTTCTATGTGAACTACATCATTACGGCTGCGTTTATCGGTACA GCGTTGGAGCTGCTACGCTTCCCGGAGCTGATTGTATATATCTGGTCATT GCTAAAGGCGAAATCCAAGGCCGAAACGCCGTACATTCGTAAGGCTATTC TAATCGAGTTTCCTTTCGGAACGCACTACGCCTGGACAACGCTCGTTTTC ACCATAGCCATTGTGTATAGCGTTGCCTGTCCGCTGATTATGCCGTTCGC CATGATCTACATCTGCCTAAAACACTTCGTGGATCGCCACAACCTCTACT TTGCCTACGGTCCGTCAAACATGATATCACGCAAGGGTGGTAAGATCCAC TCCACTGCAGTTACGATGACAAAGTTCTCGGTCGTGATCCTGGTACTGGT CATGGCCATGATTTGTTTCTTCCGTGGCGATAACGGAATGGCTCGATTCC TGCTGCTTATCATCAGCCTGGCTATCACATTGACTTTGTTCACCTTTATG TCACCAATTAAGCGGTGTGCGGCCACGCGCCGCCCAAGCATTGTGGAAAT TGCCGGTCCGGCACCCATCTACGTGCCCGATGTGCTGAAAGATAATGGGA TAAGGACCAGCAGTGTGCGACCTTCGGCGGCAGCATTTGGGGGCTACGGC TCCGACAGCGTGTCCGAGTACGACAGCTCACAATACAGCGTCAACAGTGT TGAGGCGTAAATGGTATTATTGTCGGGAGACACTACAAATATTTTTGTAA TATATCTACAAAAGCCACTAAGAACTTTTCAAGTTGGCAGCTTTGATTTG CATACGAAAGAATGACAGGAGGATAACAGCAAGGCAATTTGTGATACCTA AACCAGCCTCAATGTCATTTTTAATATGACCCCTGCACGCGAAAGCGATA GCAATATTTATTTCTGATCTGTATATAATCTACCTAATTTCCCAATTTTA TCTGTAACTGTATATATACTATATTCCTTTGCTAACTGCTTAACAAAGGG CTCGACGCTGATTTTTTGAAGCAGTAATGCTGGTAATATTTTACAAATGA AACACGAAGTGCATTATATTTTCAAGTAATTTTTTATTTATGGTAAATAA AAAACTATTAAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3987973..3989746 | 1089..2862 | 8870 | 100 | Plus |
chr2R | 21145070 | chr2R | 3986994..3987917 | 168..1091 | 4575 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 3986125..3986293 | 1..169 | 830 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tabor | 7345 | Tabor TABOR 7345bp | 5175..5217 | 2854..2812 | 116 | 74.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3986125..3986293 | 1..169 | 99 | -> | Plus |
chr2R | 3986996..3987915 | 170..1089 | 99 | -> | Plus |
chr2R | 3987974..3989746 | 1090..2862 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11210-RA | 1..2283 | 178..2460 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11210-RA | 1..2283 | 178..2460 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11210-RA | 1..2283 | 178..2460 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11210-RA | 1..2283 | 178..2460 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11210-RA | 1..2283 | 178..2460 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11210-RA | 1..2460 | 1..2460 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11210-RA | 9..2870 | 1..2862 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11210-RA | 2..2863 | 1..2862 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11210-RA | 1..2460 | 1..2460 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11210-RA | 2..2863 | 1..2862 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8098685..8098853 | 1..169 | 100 | -> | Plus |
2R | 8099556..8100475 | 170..1089 | 100 | -> | Plus |
2R | 8100534..8102306 | 1090..2862 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8098685..8098853 | 1..169 | 100 | -> | Plus |
2R | 8099556..8100475 | 170..1089 | 100 | -> | Plus |
2R | 8100534..8102306 | 1090..2862 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8098685..8098853 | 1..169 | 100 | -> | Plus |
2R | 8099556..8100475 | 170..1089 | 100 | -> | Plus |
2R | 8100534..8102306 | 1090..2862 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3986190..3986358 | 1..169 | 100 | -> | Plus |
arm_2R | 3987061..3987980 | 170..1089 | 100 | -> | Plus |
arm_2R | 3988039..3989811 | 1090..2862 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8100755..8101674 | 170..1089 | 100 | -> | Plus |
2R | 8101733..8103505 | 1090..2862 | 100 | Plus | |
2R | 8099884..8100052 | 1..169 | 100 | -> | Plus |
Translation from 177 to 2459
> RE44586.pep MVMSENSNISYCQAVANRTSFFTTAYNGIPETLILNTIFWVLLILLFTVL RHQAGDFGRLALVNSNGSKKRWTEIFYSRAASVVDPQPSTSTQVSPRPST TSQGVPDSTPLSPIQPEEGLFGWIRVTLKLRKETILLHTGPDAVHYLSFQ QHLMAVMALVTIVSLVIILPVNFLNGPKENPYDVNAFGRTTMANLSPDSP WLWVHTIITILYIPLVVLIMRRASGRNAFKKAATRTIMISNISSSDRNKT VVRNYMQELFPDVTIENVSIAYNISRLYVRNAEFERVHEARLYCEHHRNR DTLMVKPEMCSCKKENAYEYYQREERKLSGDVARLRASTMNEPLDIAFIT VSTVQEAQNIVTHFTPGTYRQWHLVFAPSPDDLFWENLNVNKSHWYLKFF CVNAVLFLVLFFLSTPAMVVSLLNSRPWVKETEGKISPLVADFLPTLMLW TLSALMPVIVAISDKWMRHYTRSKQNYSIMTKCFGYLLMMIMILPSLGLT SAQALLEWGFLNQTDRWQCIFLPDRGSFYVNYIITAAFIGTALELLRFPE LIVYIWSLLKAKSKAETPYIRKAILIEFPFGTHYAWTTLVFTIAIVYSVA CPLIMPFAMIYICLKHFVDRHNLYFAYGPSNMISRKGGKIHSTAVTMTKF SVVILVLVMAMICFFRGDNGMARFLLLIISLAITLTLFTFMSPIKRCAAT RRPSIVEIAGPAPIYVPDVLKDNGIRTSSVRPSAAAFGGYGSDSVSEYDS SQYSVNSVEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13662-PA | 759 | GF13662-PA | 1..759 | 3..760 | 3556 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23334-PA | 758 | GG23334-PA | 1..758 | 3..760 | 3951 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21905-PA | 755 | GH21905-PA | 7..755 | 5..760 | 3390 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11210-PA | 760 | CG11210-PA | 1..760 | 1..760 | 3943 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19256-PA | 765 | GI19256-PA | 12..765 | 8..760 | 3519 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17104-PA | 758 | GL17104-PA | 1..757 | 3..759 | 3529 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10844-PA | 758 | GA10844-PA | 1..757 | 3..759 | 3526 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21007-PA | 758 | GM21007-PA | 1..758 | 3..760 | 4000 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10542-PA | 758 | GD10542-PA | 1..758 | 3..760 | 3987 | 97.6 | Plus |
Dsim\GD10541-PA | 214 | GD10541-PA | 1..179 | 3..181 | 910 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22131-PA | 766 | GJ22131-PA | 13..766 | 8..760 | 3469 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23079-PA | 755 | GK23079-PA | 1..755 | 3..760 | 3551 | 87.1 | Plus |
Translation from 177 to 2459
> RE44586.hyp MVMSENSNISYCQAVANRTSFFTTAYNGIPETLILNTIFWVLLILLFTVL RHQAGDFGRLALVNSNGSKKRWTEIFYSRAASVVDPQPSTSTQVSPRPST TSQGVPDSTPLSPIQPEEGLFGWIRVTLKLRKETILLHTGPDAVHYLSFQ QHLMAVMALVTIVSLVIILPVNFLNGPKENPYDVNAFGRTTMANLSPDSP WLWVHTIITILYIPLVVLIMRRASGRNAFKKAATRTIMISNISSSDRNKT VVRNYMQELFPDVTIENVSIAYNISRLYVRNAEFERVHEARLYCEHHRNR DTLMVKPEMCSCKKENAYEYYQREERKLSGDVARLRASTMNEPLDIAFIT VSTVQEAQNIVTHFTPGTYRQWHLVFAPSPDDLFWENLNVNKSHWYLKFF CVNAVLFLVLFFLSTPAMVVSLLNSRPWVKETEGKISPLVADFLPTLMLW TLSALMPVIVAISDKWMRHYTRSKQNYSIMTKCFGYLLMMIMILPSLGLT SAQALLEWGFLNQTDRWQCIFLPDRGSFYVNYIITAAFIGTALELLRFPE LIVYIWSLLKAKSKAETPYIRKAILIEFPFGTHYAWTTLVFTIAIVYSVA CPLIMPFAMIYICLKHFVDRHNLYFAYGPSNMISRKGGKIHSTAVTMTKF SVVILVLVMAMICFFRGDNGMARFLLLIISLAITLTLFTFMSPIKRCAAT RRPSIVEIAGPAPIYVPDVLKDNGIRTSSVRPSAAAFGGYGSDSVSEYDS SQYSVNSVEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11210-PA | 760 | CG11210-PA | 1..760 | 1..760 | 3943 | 100 | Plus |