BDGP Sequence Production Resources |
Search the DGRC for RE44650
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 446 |
Well: | 50 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11562-RA |
Protein status: | RE44650.pep: gold |
Preliminary Size: | 623 |
Sequenced Size: | 717 |
Gene | Date | Evidence |
---|---|---|
CG11562 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11562 | 2002-06-07 | Blastp of sequenced clone |
CG11562 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11562 | 2008-04-29 | Release 5.5 accounting |
CG11562 | 2008-08-15 | Release 5.9 accounting |
CG11562 | 2008-12-18 | 5.12 accounting |
717 bp (717 high quality bases) assembled on 2002-06-07
GenBank Submission: AY119645
> RE44650.complete ATGTCGTAACCCGAACCGACTTCAAAACAACACAACCCGACAGCCAAATT CCTAGTGCAGGCATTTTAGGCGGAAATCTCCAGCGGCAGACCGGTGCCCA GTCATGTCGACCGCTTCGCGAGTGACTTTGGGACTGGCGGTCTCCATTTC CACAGCGATCATAGGTTATGTGCACTATAAACAATCGGCAGACCGCCTGA GACTGCACGATGGTGTCCTGAGGGACGTTGAGCAGCAACAACGGCGCAAA CACGAGAATACCTACACGCTGCAGCAGCAAATAGACATGACCAAGCAACT GAAAGCCAGGGAGGCGTCTAGCAACTCCTCTGACACGCCCGTACCTCCAT CGACGCATCGCGCACAGAGTAATCTTCAAGCGGAGAAGCCAGCAGTGCAA AATGAAGGCGAGGCTTTCAGAGGTGTTCCTCAGGGTGGAACGACTAATCA CGATGGAAGCCCGCCAACTGACATAGCTTGATCACAAATATGCCCCTAAA TATGCACCTATTAAAATCTAAGACTAAGTCGGGGAAAACAAGAATTTCGT TGTTCAAATGTACGCATTTTTGAAGATTTTAAGATTTCGTCTTAAGACAG TTGACAGCATCATTTACGCTGTTGATCGTTTTCAGTTGGTGAAGCCATCT GCGCATGGAAATATAATTAAAACAACGTGGTAAGATTCAATCTTACAAAG CAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11562-RA | 880 | CG11562-RA | 142..846 | 1..705 | 3510 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tirant | 8526 | Tirant TIRANT 8526bp | 6942..6984 | 580..538 | 116 | 74.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 292502..292696 | 1..195 | 100 | -> | Plus |
chr2L | 292753..293258 | 196..701 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11562-RA | 1..378 | 104..481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11562-RA | 1..378 | 104..481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11562-RA | 1..378 | 104..481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11562-RA | 1..378 | 104..481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11562-RA | 1..378 | 104..481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11562-RA | 1..701 | 1..701 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11562-RA | 1..701 | 1..701 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11562-RA | 48..748 | 1..701 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11562-RA | 1..701 | 1..701 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11562-RA | 48..748 | 1..701 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 292466..292660 | 1..195 | 100 | -> | Plus |
2L | 292717..293222 | 196..701 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 292466..292660 | 1..195 | 100 | -> | Plus |
2L | 292717..293222 | 196..701 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 292466..292660 | 1..195 | 100 | -> | Plus |
2L | 292717..293222 | 196..701 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 292466..292660 | 1..195 | 100 | -> | Plus |
arm_2L | 292717..293222 | 196..701 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 292717..293222 | 196..701 | 100 | Plus | |
2L | 292466..292660 | 1..195 | 100 | -> | Plus |
Translation from 103 to 480
> RE44650.pep MSTASRVTLGLAVSISTAIIGYVHYKQSADRLRLHDGVLRDVEQQQRRKH ENTYTLQQQIDMTKQLKAREASSNSSDTPVPPSTHRAQSNLQAEKPAVQN EGEAFRGVPQGGTTNHDGSPPTDIA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20633-PA | 164 | GF20633-PA | 1..104 | 1..94 | 350 | 68.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24710-PA | 125 | GG24710-PA | 1..125 | 1..125 | 566 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11547-PA | 90 | GH11547-PA | 1..88 | 1..81 | 305 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11562-PA | 125 | CG11562-PA | 1..125 | 1..125 | 637 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17036-PA | 83 | GI17036-PA | 1..68 | 1..68 | 305 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25923-PA | 119 | GL25923-PA | 1..100 | 1..97 | 332 | 68 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11067-PA | 119 | GA11067-PA | 1..100 | 1..97 | 332 | 68 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16941-PA | 125 | GM16941-PA | 1..125 | 1..125 | 636 | 96.8 | Plus |
Dsec\GM16730-PA | 125 | GM16730-PA | 1..125 | 1..125 | 636 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23014-PA | 125 | GD23014-PA | 1..125 | 1..125 | 640 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24677-PA | 115 | GJ24677-PA | 1..68 | 1..68 | 291 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15299-PA | 149 | GK15299-PA | 1..73 | 1..73 | 321 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16714-PA | 116 | GE16714-PA | 1..116 | 1..125 | 513 | 82.4 | Plus |
Translation from 103 to 480
> RE44650.hyp MSTASRVTLGLAVSISTAIIGYVHYKQSADRLRLHDGVLRDVEQQQRRKH ENTYTLQQQIDMTKQLKAREASSNSSDTPVPPSTHRAQSNLQAEKPAVQN EGEAFRGVPQGGTTNHDGSPPTDIA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11562-PA | 125 | CG11562-PA | 1..125 | 1..125 | 637 | 100 | Plus |