BDGP Sequence Production Resources |
Search the DGRC for RE45108
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 451 |
Well: | 8 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG4611-RA |
Protein status: | RE45108.pep: gold |
Preliminary Size: | 2112 |
Sequenced Size: | 2257 |
Gene | Date | Evidence |
---|---|---|
CG4611 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4611 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4611 | 2003-08-12 | Blastp of sequenced clone |
CG4611 | 2008-04-29 | Release 5.5 accounting |
CG4611 | 2008-08-15 | Release 5.9 accounting |
CG4611 | 2008-12-18 | 5.12 accounting |
2257 bp (2257 high quality bases) assembled on 2003-08-12
GenBank Submission: BT011031
> RE45108.complete CGTTTCTTTATTTACACCGCCGCCACACGCACGTTTAAAATAGTTTTTTT TTAATTACATAAAAATCACAGAAAATTGCAACAGATAACATGGCTCTGCG GTTGATTAGCCGTTCAATGAGCTGCCACATACGTGGCTTGCAATTAAATG CCACCGGAAGACGGTTAAATAGTTACAACATCAGCCGGCTGGTTATTCTG CCTGCAACTTGGTCTTGCTCACAAAATCGCCTGCTGCACGTGAGGATTAC GGATCAACAAGCCGGTTTGGAGACCAAACGAGAGGCCAACAGGAACCAGA ATCCTTTTCGCGAAGAAGTTTTTGAAGAACTTATCACAGCAGCACCCAAG GAGCACCAGAAGTTTAAGCCAGAAAAGAAACCCAAAGAGAAGTCCACCAA AAAGGTGCAGGATTTTGGTGATCCGGACACCTTTGGCGATGCCAAGGTGG CTGCAACAGAAGACCCGGGTGATGTCGAGGAAGAGGAGTTCCTTAGCAAT TCCACTAGGCGCTCAAAGAAACTAAAAGCCGTGGAATACGCCCGCCAAAT TAAGGACCATCTTAAGGCGAATCGCCTAAATGAGGCCATCGCCGTGCTGG AGCAACGGATGCTAAAGGAGGATCGCGCCAAGCCGGACAAGTACATATAC AATCTGCTGATCAGTGGCTGTGCCAAGGCGGGCTACACCCGCAAGGCCTT CTTCCTGTACACCAAGATGCGGCAACGTGGTCTTCAAGTCACCGGAGGAA CCTACACTTCGCTATTCAACGCCTGCGCCAATGCTCCCTCCGTGAGCGAT GGCCTGGCCAAGGCCCAAATCCTGCGGGAGAACATGCTCGAGAAGGGCTA CGAACCAAATGTGAAAAACTACAATGCCATGATCAAGGCGTATGGAAGGT GTGGCGATGTGGACACCGCCTACATGCTGGCCGACGAAATGATGGAGCGC CAGCTGGAACTGAATGCAGATACATTCAACTTTCTGCTGCAGGCGTGTGC CAGCAACTCGGAGCACGGTTTCCGGCATGCTCTGCTGACTTGGCACAACA TGTTGCAGCGAGGTATTAGCCCGGACTACTACAGCTTCAATGCAATGCTG AGATGTGCAAGGGATTGTGGCTTCGGTGACTTGGATTCCATGCGAGAGGT TATCGATAAAATTGCGCCCTCAGCTGCTAGAAAGAAACCAGTTCTCCAGT TGGAGAAAGGTCAGCAAGATGATTTACCCAGTGTGGAAGCCAACACAACT ACGTTGCCTGCCCAAATTGAGGTGGCCACCACAGCGAGCGAGCTGGAACT GCCCAATCTTTTGCTGCCTCAGCCGCATCTGGGCAGTCTGGTGGCCCTGG AGGAGGTGACACGTCCACACGAACGTTTCTTGCTACTCGGCGGTCTCACT GGCTTTCTGGAGCACATGAAGCAGCACAACATTACACCGGACATCGAGAC ATTTACCGCAATGCTGGAGGTGATACCGCCCACAAATGCTGCCGAGAAGC AGCTGCTCACGTTTGTGCGCAAGATTGGCCTCAAGGCGGACATCGACTTC TTCAACATACTGATTAAAAAGCGTTCCATGCGCTTTGATTACGAGAGTGC CAAGGAAGTGCTCCTCATGATTCGCACGGCGGGTTTGCGGCCGGACATTG TCACCTACGGTGTGCTCGCTTTGGGTTGTCGCACGCAGGAAGAGGCTAGG GAACTGCTGGAACAGATGCATGTGGCGGGCATTAAGATGAACATGCCCAT ACTGGGGGCCATGCTGCGGCAGGGATGTGCTAACAAATCCTTTAGCTACG TCAACGAGATCATTCAGTTGAGTCTGGAGGAGGGCCTTAAGCCAAATGAA GCCTTCCTGCGGCACCTGCACAACTTTCACAGAGGTTGTGCGCGAGCCAT TGATGCCAGACATCCATCAACCAAGACGGCAGCCTTTAAGAAGGGCCACT CTAAGTTCTGTGATAAATACCGCCTGTACTACGAGGAGCAGGGACTGTCC GGTCTCAAGCTGGAGGACGCCATTGCCAAGGTGAAGGAGCGCCCGTATGA CCAGTTCAAGCTGCCGCCTGTCAACGGAATGGAACCACTCAAGCACGAGC AGCTCAAGCACAAAACGAAACAGCGAAAGTACATCAAGAAGATCAAGATA CACGAGCTGAAGGATGACCCTCCCAAAGAGTCTTTGAAGAGGATAGAATA AGCTAAAAAGTTTAACTCCCAATAAAGTTTATTATTATTCGAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4611-RA | 2263 | CG4611-RA | 24..2263 | 2..2241 | 11200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 5128938..5130848 | 1..1910 | 99 | -> | Plus |
chr3L | 5130905..5131235 | 1911..2241 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4611-RA | 1..2112 | 90..2201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4611-RA | 1..2112 | 90..2201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4611-RA | 1..2112 | 90..2201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4611-RA | 1..2112 | 90..2201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4611-RA | 1..2112 | 90..2201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4611-RA | 1..2242 | 1..2241 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4611-RA | 1..2240 | 2..2241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4611-RA | 7..2248 | 1..2241 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4611-RA | 1..2242 | 1..2241 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4611-RA | 7..2248 | 1..2241 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5136382..5138292 | 1..1910 | 99 | -> | Plus |
3L | 5138349..5138679 | 1911..2241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5136382..5138292 | 1..1910 | 99 | -> | Plus |
3L | 5138349..5138679 | 1911..2241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5136382..5138292 | 1..1910 | 99 | -> | Plus |
3L | 5138349..5138679 | 1911..2241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 5129482..5131392 | 1..1910 | 99 | -> | Plus |
arm_3L | 5131449..5131779 | 1911..2241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5129482..5131392 | 1..1910 | 99 | -> | Plus |
3L | 5131449..5131779 | 1911..2241 | 100 | Plus |
Translation from 89 to 2200
> RE45108.pep MALRLISRSMSCHIRGLQLNATGRRLNSYNISRLVILPATWSCSQNRLLH VRITDQQAGLETKREANRNQNPFREEVFEELITAAPKEHQKFKPEKKPKE KSTKKVQDFGDPDTFGDAKVAATEDPGDVEEEEFLSNSTRRSKKLKAVEY ARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYIYNLLISGCAKAGYT RKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSDGLAKAQILRENML EKGYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLL QACASNSEHGFRHALLTWHNMLQRGISPDYYSFNAMLRCARDCGFGDLDS MREVIDKIAPSAARKKPVLQLEKGQQDDLPSVEANTTTLPAQIEVATTAS ELELPNLLLPQPHLGSLVALEEVTRPHERFLLLGGLTGFLEHMKQHNITP DIETFTAMLEVIPPTNAAEKQLLTFVRKIGLKADIDFFNILIKKRSMRFD YESAKEVLLMIRTAGLRPDIVTYGVLALGCRTQEEARELLEQMHVAGIKM NMPILGAMLRQGCANKSFSYVNEIIQLSLEEGLKPNEAFLRHLHNFHRGC ARAIDARHPSTKTAAFKKGHSKFCDKYRLYYEEQGLSGLKLEDAIAKVKE RPYDQFKLPPVNGMEPLKHEQLKHKTKQRKYIKKIKIHELKDDPPKESLK RIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23967-PA | 703 | GF23967-PA | 1..703 | 1..703 | 2840 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15260-PA | 703 | GG15260-PA | 1..702 | 1..702 | 3274 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16176-PA | 711 | GH16176-PA | 1..711 | 1..703 | 2583 | 70.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4611-PA | 703 | CG4611-PA | 1..703 | 1..703 | 3635 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13329-PA | 723 | GI13329-PA | 1..723 | 1..703 | 2571 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22616-PA | 707 | GL22616-PA | 1..707 | 1..703 | 2801 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18300-PA | 707 | GA18300-PA | 1..707 | 1..703 | 2815 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14694-PA | 686 | GM14694-PA | 1..686 | 1..703 | 3312 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13877-PA | 702 | GD13877-PA | 1..702 | 1..703 | 3400 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13155-PA | 721 | GJ13155-PA | 1..721 | 1..703 | 2482 | 68.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19803-PA | 700 | GK19803-PA | 1..686 | 1..694 | 2368 | 67.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21482-PA | 702 | GE21482-PA | 1..702 | 1..703 | 3276 | 92.6 | Plus |
Translation from 89 to 2200
> RE45108.hyp MALRLISRSMSCHIRGLQLNATGRRLNSYNISRLVILPATWSCSQNRLLH VRITDQQAGLETKREANRNQNPFREEVFEELITAAPKEHQKFKPEKKPKE KSTKKVQDFGDPDTFGDAKVAATEDPGDVEEEEFLSNSTRRSKKLKAVEY ARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYIYNLLISGCAKAGYT RKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSDGLAKAQILRENML EKGYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLL QACASNSEHGFRHALLTWHNMLQRGISPDYYSFNAMLRCARDCGFGDLDS MREVIDKIAPSAARKKPVLQLEKGQQDDLPSVEANTTTLPAQIEVATTAS ELELPNLLLPQPHLGSLVALEEVTRPHERFLLLGGLTGFLEHMKQHNITP DIETFTAMLEVIPPTNAAEKQLLTFVRKIGLKADIDFFNILIKKRSMRFD YESAKEVLLMIRTAGLRPDIVTYGVLALGCRTQEEARELLEQMHVAGIKM NMPILGAMLRQGCANKSFSYVNEIIQLSLEEGLKPNEAFLRHLHNFHRGC ARAIDARHPSTKTAAFKKGHSKFCDKYRLYYEEQGLSGLKLEDAIAKVKE RPYDQFKLPPVNGMEPLKHEQLKHKTKQRKYIKKIKIHELKDDPPKESLK RIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4611-PA | 703 | CG4611-PA | 1..703 | 1..703 | 3635 | 100 | Plus |