BDGP Sequence Production Resources |
Search the DGRC for RE45155
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 451 |
Well: | 55 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG7787-RA |
Protein status: | RE45155.pep: gold |
Sequenced Size: | 885 |
Gene | Date | Evidence |
---|---|---|
CG7787 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7787 | 2002-06-10 | Blastp of sequenced clone |
CG7787 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7787 | 2008-04-29 | Release 5.5 accounting |
CG7787 | 2008-08-15 | Release 5.9 accounting |
CG7787 | 2008-12-18 | 5.12 accounting |
885 bp (885 high quality bases) assembled on 2002-06-10
GenBank Submission: BT001655
> RE45155.complete TGGGGTATCAACTGATTACATTTTACGCATTTGTTGCAAAATTGAGATAA TTCCACAAAAAAATGACAGAGGAAGCTGATTTTAGCGAGCAAATCACCGA TGGGAAAAACAAATCAAATGTGCGCTGCCAGTTTTGCAACTGTTTGATGC TGAAAGCACAAGAGGGCACCTACAACCAGGAGGAGGTGGATGTGCCACTG ATGACGCAGAAGCAGGATCGAACGGCGGACAGCCTAAACAGCGAGCCACT GAAAGACTTCTGGCTGGTCAAGGACATGATGACATTCGAGAACATCGGGT TCTCCAACACGGTGGACGGCAGAAAGTTTCTGGTTTGCGCGGACTGCGAG CGAGGACCTGTGGGCTACCATGATCTGAGCACCCGCCACTGCTATCTGGC CCTCAAGAGGGTGGTGCACAAGGACACCTAGCTGCAGCGATGCCAAACAC GTGTGTCCAGTCTCTTGCAATCCATTTTATCATGCCACTTATCCGCTAAT CTTTAATGTATCAGTTTTTCATGCCACGGAATAGAAGCGATTTTCATTTG ATTTAGTTAGGGTGAAGTAATTGAGTATTTCCTTGAACATGCACTATTTG TACACTACCATCCTCTAGTTATCAGAAGTATCTATGCTTTTAGTGAAGAT TCGCTGAACGAATTCGCTGAAAATCCGTGAAATCGAAGGCCTAGTTTGTC GAGTTTAGATTTAAGCGAAATAAAACGTTTTAACGTGCCTGGTTAGCAAA TGATTGTGCAAGCATTTTTAAATTAGTAATTATTTAGTTATTTGTTAAAA CTTTCGTTTTAAAATCTCAGAAAACTTAGAAAACACCCTGGTCATTAAAA ACATCGCTCTTTTGTATTCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7787-RA | 1006 | CG7787-RA | 62..929 | 3..870 | 4340 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 2371..2438 | 756..823 | 133 | 66.2 | Plus |
HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 5..78 | 812..740 | 124 | 64.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8319277..8319461 | 1..185 | 96 | -> | Plus |
chr2L | 8319532..8320213 | 186..869 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7787-RA | 1..369 | 63..431 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7787-RA | 1..369 | 63..431 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7787-RA | 1..369 | 63..431 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7787-RA | 1..369 | 63..431 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7787-RA | 1..369 | 63..431 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7787-RA | 24..892 | 1..869 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7787-RA | 24..892 | 1..869 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7787-RA | 20..888 | 1..869 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7787-RA | 24..892 | 1..869 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7787-RA | 20..888 | 1..869 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8320347..8320531 | 1..185 | 99 | -> | Plus |
2L | 8320602..8321285 | 186..869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8320347..8320531 | 1..185 | 99 | -> | Plus |
2L | 8320602..8321285 | 186..869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8320347..8320531 | 1..185 | 99 | -> | Plus |
2L | 8320602..8321285 | 186..869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8320347..8320531 | 1..185 | 99 | -> | Plus |
arm_2L | 8320602..8321285 | 186..869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8320602..8321285 | 186..869 | 100 | Plus | |
2L | 8320347..8320531 | 1..185 | 99 | -> | Plus |
Translation from 62 to 430
> RE45155.pep MTEEADFSEQITDGKNKSNVRCQFCNCLMLKAQEGTYNQEEVDVPLMTQK QDRTADSLNSEPLKDFWLVKDMMTFENIGFSNTVDGRKFLVCADCERGPV GYHDLSTRHCYLALKRVVHKDT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14634-PA | 122 | GF14634-PA | 1..122 | 1..122 | 554 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10534-PA | 122 | GG10534-PA | 1..122 | 1..122 | 628 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11590-PA | 122 | GH11590-PA | 1..122 | 1..122 | 506 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
strat-PA | 122 | CG7787-PA | 1..122 | 1..122 | 659 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17159-PA | 94 | GI17159-PA | 1..94 | 29..122 | 393 | 74.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19612-PA | 121 | GL19612-PA | 1..121 | 1..121 | 564 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23151-PA | 121 | GA23151-PA | 1..121 | 1..121 | 564 | 81.8 | Plus |
Dpse\GA20587-PA | 121 | GA20587-PA | 1..121 | 1..121 | 564 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16890-PA | 122 | GM16890-PA | 1..122 | 1..122 | 645 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23523-PA | 122 | GD23523-PA | 1..121 | 1..121 | 643 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17663-PA | 122 | GJ17663-PA | 1..122 | 1..122 | 514 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24796-PA | 121 | GK24796-PA | 2..121 | 3..122 | 526 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18753-PA | 122 | GE18753-PA | 1..122 | 1..122 | 637 | 95.9 | Plus |
Translation from 62 to 430
> RE45155.hyp MTEEADFSEQITDGKNKSNVRCQFCNCLMLKAQEGTYNQEEVDVPLMTQK QDRTADSLNSEPLKDFWLVKDMMTFENIGFSNTVDGRKFLVCADCERGPV GYHDLSTRHCYLALKRVVHKDT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7787-PA | 122 | CG7787-PA | 1..122 | 1..122 | 659 | 100 | Plus |