BDGP Sequence Production Resources |
Search the DGRC for RE45222
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 452 |
Well: | 22 |
Vector: | pFlc-1 |
Associated Gene/Transcript | spz6-RA |
Protein status: | RE45222.pep: gold |
Preliminary Size: | 1371 |
Sequenced Size: | 1661 |
Gene | Date | Evidence |
---|---|---|
CG9196 | 2002-10-12 | Blastp of sequenced clone |
CG9196 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9196 | 2008-04-29 | Release 5.5 accounting |
CG9196 | 2008-08-15 | Release 5.9 accounting |
CG9196 | 2008-12-18 | 5.12 accounting |
1661 bp (1661 high quality bases) assembled on 2002-10-12
GenBank Submission: BT001656
> RE45222.complete TTGAGTTCAGTTGGTGCACTTGACGCGTCTGGTTCTGCTTCCCACCACTG CGGATTAAGCCAAGCCTGACGAAGGCCAAGTCCAAGAACCTTCTACAAGA AGCAAACGAGCGGAGATGGATTATCGTCTAGTGCTGAAAATTCTCAGCTT TCTGCTGCTGGCCCAATTGGGTTTCTCCCAGCCGCAGCAGCAGTCGCCAT CTGACTACGGTGAGGAGCAGCCTCCGGAGGGTTATTACGCCTTCGTCGAG TCCCCGAATGCGGTGCCTCCCAAGGTCAGGCCGCCACCTTACACCTTTGT AAATGCGGAGTGCAAGGACGTGGCCGCCGGCAAGAAGTCTGCCGTGTCCG TTCACAACATTTGCGGAGATCTAAACAAGGGTCAGATACCCAAGAATCCG CTGGGACAAAATGTACTCGGGGAGCCCTATCCCTTCGAACTTATTCGCAA CCAAACGCTGAAGTTCCTTTCGAAAACTTTGCCCGTTCTAAAGGCCGACG ATACCCTACCCAAGGTCACCCAGATCATTCGAGATGAACCCGTGGAACAG CTGGACAGCAACAACATCGACAGGCCCTATCCCGCAGGAGGTTCCACTCG CGTCCGCCGCAGCCTGCCGGAGGGCGTGGAGTCCAACGAGTACAGCTACT TCGATCCCGCCCTGGACGAGGAGGAGCAACACAAGCAAAGGGATCGGAAT AACCAGCAGAGAAGGGCCGCCGAGGAGAGGAAGCCAAGGAAATTCTGCGA TGGCGGTGGAGTATTTTGCACCTTATACAGGGCAATTCAGGGAGACACCG GAGGAGCAGCCCCTGCCACGCCCACTGCGGAAAGGCGCGAGGAGGTGGGT CCCATCCGGTACGAGGGTCCTCCCACTCCCTGTCCCGCCAAGGTAGAGTA CGCTACTCCCGTCTTCGCTAAGAACTACCAAGGCGCCTGGCGTTATGTGG TCCAGATTCCCTATGAGGGCTACTTCACCCAGACGGTGGAGGTGACGCGT TGCATTCAGGCACGCTGTCACTACCTGGACGGCGGTTGCTTGTCGTCACC ACGCTGGGTAAGCCTGTTGGTGGCGGAGATCTTCTACCCCAATGCGGAGG ACACAGTGCCCACCAGCTCGACCACCACTCAGGCCCCTTCTGTGCAGGAT TTCCAGGCCTACCAGCAGTACCTGCAGAAGAGGGCAGGCGTGGCTACCGC CTCCGACGGAACCTCGTCTGGAGCAGCCGGCCCCGCGGCGCAGGTGGACG CCCACTGCGATGGACACGATGAACTGGGCTGCTTCCAGGTGCGTCTCTAC TACGACTGGTTCCTCATCCCCGGCTCTTGCAAGTGCTGGCGCCCGGACTA CTTCGCCAAGTACGTGCGCCGGAAGTCGGTGGCCGAGTTGTGAACACTTC CTGGACAGGATTTTCGAAGGAAATCCTTAGAATAAGACTAAGTTCTAGCC TTTAGAGGAACACAACTTTGAGGTGAAAGGCTCATTCTAGTAATCCACCC GGGTGCCCCACAGCCCTATACGGATCACGCAGAGTTTGCAGTTCGTGCAT CTACCAGATACAATCTTAACCTAGGCGGTTAGCTCCCTCTTTCGACTGAT TAAGCCAAGAGCAGTGCATTTCTACTAATAAATACGTTTCTACCTAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spz6-RA | 1816 | spz6-RA | 104..1747 | 4..1647 | 8220 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20645522..20646404 | 763..1645 | 4400 | 99.9 | Plus |
chr2R | 21145070 | chr2R | 20644795..20645121 | 436..762 | 1635 | 100 | Plus |
chr2R | 21145070 | chr2R | 20644435..20644734 | 136..435 | 1500 | 100 | Plus |
chr2R | 21145070 | chr2R | 20643321..20643453 | 4..136 | 665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24759584..24760468 | 763..1647 | 4425 | 100 | Plus |
2R | 25286936 | 2R | 24758857..24759183 | 436..762 | 1635 | 100 | Plus |
2R | 25286936 | 2R | 24758497..24758796 | 136..435 | 1500 | 100 | Plus |
2R | 25286936 | 2R | 24757383..24757515 | 4..136 | 665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24760783..24761667 | 763..1647 | 4425 | 100 | Plus |
2R | 25260384 | 2R | 24760056..24760382 | 436..762 | 1635 | 100 | Plus |
2R | 25260384 | 2R | 24759696..24759995 | 136..435 | 1500 | 100 | Plus |
2R | 25260384 | 2R | 24758582..24758714 | 4..136 | 665 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20643318..20643453 | 1..136 | 98 | -> | Plus |
chr2R | 20644436..20644734 | 137..435 | 100 | -> | Plus |
chr2R | 20644795..20645121 | 436..762 | 100 | -> | Plus |
chr2R | 20645522..20646404 | 763..1645 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9196-RA | 1..1278 | 116..1393 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz6-RA | 1..1278 | 116..1393 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz6-RA | 1..1278 | 116..1393 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9196-RA | 1..1278 | 116..1393 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz6-RA | 1..1278 | 116..1393 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9196-RA | 2..1645 | 2..1645 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz6-RA | 2..1645 | 2..1645 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz6-RA | 3..1647 | 1..1645 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9196-RA | 2..1645 | 2..1645 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz6-RA | 3..1647 | 1..1645 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24758498..24758796 | 137..435 | 100 | -> | Plus |
2R | 24757380..24757515 | 1..136 | 98 | -> | Plus |
2R | 24758857..24759183 | 436..762 | 100 | -> | Plus |
2R | 24759584..24760466 | 763..1645 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24758498..24758796 | 137..435 | 100 | -> | Plus |
2R | 24757380..24757515 | 1..136 | 98 | -> | Plus |
2R | 24758857..24759183 | 436..762 | 100 | -> | Plus |
2R | 24759584..24760466 | 763..1645 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24758498..24758796 | 137..435 | 100 | -> | Plus |
2R | 24757380..24757515 | 1..136 | 98 | -> | Plus |
2R | 24758857..24759183 | 436..762 | 100 | -> | Plus |
2R | 24759584..24760466 | 763..1645 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20644903..20645038 | 1..136 | 98 | -> | Plus |
arm_2R | 20646021..20646319 | 137..435 | 100 | -> | Plus |
arm_2R | 20646380..20646706 | 436..762 | 100 | -> | Plus |
arm_2R | 20647107..20647989 | 763..1645 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24759715..24760013 | 137..435 | 100 | -> | Plus |
2R | 24760074..24760400 | 436..762 | 100 | -> | Plus |
2R | 24760801..24761683 | 763..1645 | 100 | Plus | |
2R | 24758597..24758732 | 1..136 | 98 | -> | Plus |
Translation from 115 to 1392
> RE45222.pep MDYRLVLKILSFLLLAQLGFSQPQQQSPSDYGEEQPPEGYYAFVESPNAV PPKVRPPPYTFVNAECKDVAAGKKSAVSVHNICGDLNKGQIPKNPLGQNV LGEPYPFELIRNQTLKFLSKTLPVLKADDTLPKVTQIIRDEPVEQLDSNN IDRPYPAGGSTRVRRSLPEGVESNEYSYFDPALDEEEQHKQRDRNNQQRR AAEERKPRKFCDGGGVFCTLYRAIQGDTGGAAPATPTAERREEVGPIRYE GPPTPCPAKVEYATPVFAKNYQGAWRYVVQIPYEGYFTQTVEVTRCIQAR CHYLDGGCLSSPRWVSLLVAEIFYPNAEDTVPTSSTTTQAPSVQDFQAYQ QYLQKRAGVATASDGTSSGAAGPAAQVDAHCDGHDELGCFQVRLYYDWFL IPGSCKCWRPDYFAKYVRRKSVAEL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13569-PA | 421 | GF13569-PA | 1..421 | 1..425 | 2005 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23001-PA | 426 | GG23001-PA | 1..426 | 1..425 | 2202 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20354-PA | 429 | GH20354-PA | 1..429 | 1..425 | 1847 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spz6-PA | 425 | CG9196-PA | 1..425 | 1..425 | 2286 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20023-PA | 420 | GI20023-PA | 1..420 | 1..425 | 1785 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16770-PA | 434 | GL16770-PA | 1..434 | 1..425 | 1925 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21605-PA | 432 | GA21605-PA | 1..432 | 1..425 | 1927 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11895-PA | 425 | GM11895-PA | 1..425 | 1..425 | 2239 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11893-PA | 425 | GD11893-PA | 1..425 | 1..425 | 2242 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21271-PA | 424 | GJ21271-PA | 1..424 | 1..425 | 1828 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21666-PA | 434 | GK21666-PA | 1..434 | 1..425 | 1803 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14438-PA | 425 | GE14438-PA | 1..425 | 1..425 | 2226 | 97.6 | Plus |
Translation from 115 to 1392
> RE45222.hyp MDYRLVLKILSFLLLAQLGFSQPQQQSPSDYGEEQPPEGYYAFVESPNAV PPKVRPPPYTFVNAECKDVAAGKKSAVSVHNICGDLNKGQIPKNPLGQNV LGEPYPFELIRNQTLKFLSKTLPVLKADDTLPKVTQIIRDEPVEQLDSNN IDRPYPAGGSTRVRRSLPEGVESNEYSYFDPALDEEEQHKQRDRNNQQRR AAEERKPRKFCDGGGVFCTLYRAIQGDTGGAAPATPTAERREEVGPIRYE GPPTPCPAKVEYATPVFAKNYQGAWRYVVQIPYEGYFTQTVEVTRCIQAR CHYLDGGCLSSPRWVSLLVAEIFYPNAEDTVPTSSTTTQAPSVQDFQAYQ QYLQKRAGVATASDGTSSGAAGPAAQVDAHCDGHDELGCFQVRLYYDWFL IPGSCKCWRPDYFAKYVRRKSVAEL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spz6-PA | 425 | CG9196-PA | 1..425 | 1..425 | 2286 | 100 | Plus |