BDGP Sequence Production Resources |
Search the DGRC for RE45235
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 452 |
Well: | 35 |
Vector: | pFlc-1 |
Associated Gene/Transcript | COQ7-RA |
Protein status: | RE45235.pep: gold |
Sequenced Size: | 903 |
Gene | Date | Evidence |
---|---|---|
CG14437 | 2002-01-01 | Sim4 clustering to Release 2 |
COQ7 | 2008-04-29 | Release 5.5 accounting |
COQ7 | 2008-04-29 | Picked prior to 5.5 |
COQ7 | 2008-08-15 | Release 5.9 accounting |
COQ7 | 2008-12-18 | 5.12 accounting |
903 bp assembled on 2007-07-16
GenBank Submission: BT031015
> RE45235.complete ATCCCTGGATTGGATTGCGCAAAAATAAACAGAACGCAAATTGTTTTTGT GCTCGGCAATTCGGCGAATTGCACTTTACCTAATAATTTATTTATTCAAC ACAATACATCTCGTGGAAAGCTGCAAATTAGCAATGAATGGAATGCTGAG AAGAGGTCTTAGCCGGCCCGAGCCACGCCTGCTCTCCAAGCGCTATCTAA GCTCAGCAACTGGAGGAGGATCAGCAGGCACGACCGAAGGAGGCAGCTCT GAAACCACCCCGCTGCGTCCACGTCCAAATGCGCTCACAGATGAGATTAT ACGCGTCGATCATGCCGGCGAATTGGGAGCAGATCGCATTTACGCCGGGC AAATGGCCATTCTGGGCAACGGACCGCTGGGCAAGACCATCGGACACATG TGGGAGCAGGAGAAAGAGCATCGTAAACAGTTCGAGCAGCTCATTCAACA GCACCGCGTGCGTCCAACGATCATGACGCCAATTTGGAACGTGGCCGGAT TTGTGCTGGGCGCCGGAACCGCCCTCATGGGCGAAAAGGCAGCCATGGCC TGCACGGTGGCAGTGGAGACGGTGATCGTAGAACACTACAATGACCAGCT GCGTCAGATAATGGAGGCACCGAACCCGGATAAGGAGCTGTTGGCCACCA TCACCAAGTTCCGGGACGAGGAGCAGGAGCACCACGACACGGGCATTGAT CACGGTGCCGAGCAAGCGCCCTTTTACCAGGCCATGACCGAGGTAATCAA GTTTGGCTGCAAGACGGCTATTGCCATCTCGAAGAAGATCTAGGCTGAAA CAGTTGGGCCCCCTGTATATATCAAAATCAAATTATCTGTTCCGCTAAGC TAACCGTGTTAAGCATTAAAGATAGAGCTAAATGTCCAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
COQ7-RA | 1117 | COQ7-RA | 167..1054 | 1..888 | 4440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6664358..6664855 | 138..635 | 2415 | 99 | Plus |
chrX | 22417052 | chrX | 6664916..6665170 | 633..887 | 1245 | 99.2 | Plus |
chrX | 22417052 | chrX | 6663368..6663504 | 1..137 | 685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6663368..6663504 | 1..137 | 100 | -> | Plus |
chrX | 6664358..6664854 | 138..634 | 98 | -> | Plus |
chrX | 6664918..6665170 | 635..887 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
COQ7-RA | 1..660 | 134..793 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
COQ7-RA | 1..660 | 134..793 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
COQ7-RA | 1..660 | 134..793 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
COQ7-RA | 1..660 | 134..793 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
COQ7-RA | 1..660 | 134..793 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
COQ7-RA | 2..888 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
COQ7-RA | 2..888 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
COQ7-RA | 13..899 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
COQ7-RA | 2..888 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
COQ7-RA | 13..899 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6771237..6771373 | 1..137 | 100 | -> | Plus |
X | 6772227..6772723 | 138..634 | 100 | -> | Plus |
X | 6772787..6773039 | 635..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6771237..6771373 | 1..137 | 100 | -> | Plus |
X | 6772227..6772723 | 138..634 | 100 | -> | Plus |
X | 6772787..6773039 | 635..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6771237..6771373 | 1..137 | 100 | -> | Plus |
X | 6772227..6772723 | 138..634 | 100 | -> | Plus |
X | 6772787..6773039 | 635..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6665270..6665406 | 1..137 | 100 | -> | Plus |
arm_X | 6666260..6666756 | 138..634 | 100 | -> | Plus |
arm_X | 6666820..6667072 | 635..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6780885..6781137 | 635..887 | 100 | Plus | |
X | 6780325..6780821 | 138..634 | 100 | -> | Plus |
X | 6779335..6779471 | 1..137 | 100 | -> | Plus |
Translation from 133 to 792
> RE45235.hyp MNGMLRRGLSRPEPRLLSKRYLSSATGGGSAGTTEGGSSETTPLRPRPNA LTDEIIRVDHAGELGADRIYAGQMAILGNGPLGKTIGHMWEQEKEHRKQF EQLIQQHRVRPTIMTPIWNVAGFVLGAGTALMGEKAAMACTVAVETVIVE HYNDQLRQIMEAPNPDKELLATITKFRDEEQEHHDTGIDHGAEQAPFYQA MTEVIKFGCKTAIAISKKI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
COQ7-PA | 219 | CG14437-PA | 1..219 | 1..219 | 1140 | 100 | Plus |
Translation from 133 to 792
> RE45235.pep MNGMLRRGLSRPEPRLLSKRYLSSATGGGSAGTTEGGSSETTPLRPRPNA LTDEIIRVDHAGELGADRIYAGQMAILGNGPLGKTIGHMWEQEKEHRKQF EQLIQQHRVRPTIMTPIWNVAGFVLGAGTALMGEKAAMACTVAVETVIVE HYNDQLRQIMEAPNPDKELLATITKFRDEEQEHHDTGIDHGAEQAPFYQA MTEVIKFGCKTAIAISKKI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19758-PA | 40 | GF19758-PA | 1..40 | 180..219 | 213 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19611-PA | 217 | GG19611-PA | 1..217 | 4..219 | 1068 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24447-PA | 220 | GH24447-PA | 50..220 | 49..219 | 836 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
COQ7-PA | 219 | CG14437-PA | 1..219 | 1..219 | 1140 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21648-PA | 210 | GI21648-PA | 20..210 | 29..219 | 887 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26752-PA | 215 | GL26752-PA | 1..215 | 1..219 | 967 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12984-PA | 215 | GA12984-PA | 1..215 | 1..219 | 968 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12529-PA | 216 | GM12529-PA | 1..216 | 4..219 | 1111 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16815-PA | 187 | GD16815-PA | 1..183 | 1..183 | 952 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16885-PA | 221 | GJ16885-PA | 46..221 | 44..219 | 887 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25105-PA | 215 | GK25105-PA | 36..215 | 43..219 | 900 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16772-PA | 216 | GE16772-PA | 1..216 | 4..219 | 1088 | 95.4 | Plus |