Clone RE45331 Report

Search the DGRC for RE45331

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:453
Well:31
Vector:pFlc-1
Associated Gene/TranscriptMitf-RA
Protein status:RE45331.pep: gold
Preliminary Size:279
Sequenced Size:4038

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17469 2002-01-01 Sim4 clustering to Release 2
Mitf 2008-04-29 Release 5.5 accounting
Mitf 2008-08-15 Release 5.9 accounting
Mitf 2008-12-18 5.12 accounting

Clone Sequence Records

RE45331.complete Sequence

4038 bp (4038 high quality bases) assembled on 2003-08-11

GenBank Submission: BT011052

> RE45331.complete
GTTTTGAAACTTTAGGTATTCATTAGTAGTTCCGAATCTTTAACTGCTGA
GGCGAAATTATGTGAACTTCATAATTAGTAAAAAATAAAAATTGTTCTAT
GTATATTGTTAGTTGGGTATATAAAATTTCCTAAGTATAAAAAATTTAAT
CCTAAATATGACGGAATCTGGAATCGATTTGGGCTTTGATATGGAGTTTG
ATCTAAATATAAACTTGTTGAATGATAACGACAATATGGATTTCTTACCA
AATGTTACTGAGAATATGGAGTTCTATGAATTGAAATCATCATCACGCTG
TATACGGCATAATGAAATACCGACATTTAAAACTGCTACTCCCACTTCAC
GAACACAACTAAAACTGCAGCTACAACGTGAACAACAGCAACAAATGATG
ATACAACAACAGACATTAGACACTGCTATGGACCCAAAAATGCATCTATT
GTTTGGCAGTGGGCAGGGGCTTATGGAATCGGAATTCATTGACAGCGGTA
GTACCAGTGCTTGTGGCAGCGGGTCATCCAGTTTAGAACAAATGTCACAG
TTAGTGCAAATGGACAATTTAATTGATTCGTCAAGTGGAGCCAAGCTTAA
AGTTCCTCTTCAAAGTATCGGAGTAGATGTGCCACCCCAAGTGCTGCAGG
TCAGTACAGTGCTTGAAAACCCTACAAGGTATCACGTTATCCAAAAGCAA
AAGAATCAAGTGAGGCAATATCTCAGCGAATCCTTTAAGCCGTCTATGTG
GGGCAGTCATACCAGCGAAATAAAATTAGCAAATAATTCTGCGTCAACGG
GAAATCTTCAAAATTCATCTTTACAGAAAGGTATTTGCGATCCATTGGAG
CGTACAAACCGATTTGGATGCGATTCGGCTGTGAGTGCTAAAAGAATTAT
GCCTTCCGATGACGCAATGCCTATTTCCCCATTCGGTGGTAGTTTTGTAC
GATGTGATGACATAAATCCAATTGAGCCAACTGTATTACGACCTAATAGT
CATGGTGCTGGGGAACCAGAAAATGCACATAGAACGGCCCAGTTGGGACT
TAGTAAAGCTAATTCAAGCCTAAGTTCAACGCGTTCTTCTTCAGGGATTG
TTAATTCAATTCGAATTTCCAGTACATCAAGCTCGTTACAGTCTACCTCA
GCTCCTATTTCGCCGAGCGTAAGTTCGGTTGCAACGAGTGTCTCTGAGCT
ACCATCATTCGACAGCGATCCAGATGACATCTTCGATGATATATTACAAA
ATGACTCTTTTAACTTTGATAAAAACTTCAACTCTGAGCTTTCAATTAAA
CAGGAACCTCAAAATTTAACTGATGCTGAAATGAATGCCCTAGCCAAGGA
CAGACAAAAGAAAGACAACCATAATATGATTGAGCGAAGGCGACGCTTTA
ATATAAATGACAGAATAAAAGAGCTTGGTACCCTTTTGCCAAAGGGCAGT
GATGCTTTTTACGAAGTAGTTCGAGACATTCGTCCAAACAAGGGGACAAT
CTTGAAGTCCTCTGTTGACTACATTAAATGCTTGAAACATGAGGTGACTC
GCTTAAGACAAAATGAGTTACGTCAACGTCAAGTAGAGTTGCAAAATCGA
AAGCTCATGTCTCGAATAAAAGAATTGGAAATGCAGGCCAAGTCCCATGG
AATTTTGTTATCAGAAAACCACCTAACATCACTATCAGCGCCTACTCAAC
CTTATCTTAAAAGTTTTAGCCTGTCTCCTACTGCTTCTCGGAGTCGTCGA
TCACTTTTTGACCAACCTGTTGAAAAAAAAATACAAGTTATTGATGGTGC
CGATGGAAATATGGGAATGAATCAGGTTGATGAGTTTATGGAAGATTGCA
AGTATGCAGTACAAGGCGGCGATCCGATGTTGTCCTCGCATAGTCACATG
CAATCCGCGCCACAATCACCGAGTTCAAAAACTTTGAATAGTGGAAGTTT
TGAACCAAAGAATTTTTCGGAGGCTGATGAAAGCCTTTTTAGAGGCAAAT
CAAGTTTAGCATCAGATGACTGTTGCGGTATAAATTGCAGTACTTCGTGC
TATATTCAACACCAATTGACTTCGCGTGAGGGCCATCCAAATCATTCTCA
CCACACGGGTATACGAGAAATTCATAGTTTGTCTGATTCGGCTCAAAACT
CAGAGTTTAGTAGGCTTGAGCATTGCGATGATCCACTTCTCTCATCTTCC
CATAGGTCACTTGGCACCGTAGACGAAGATCAACATAATTCAGTTGATAT
GTCTGCAGTCATGGTACACGACTCCCTATCCTCTTTGGTAGATGACAACA
ATAGCGAAACAATGGTTCTTGCATCTGACACATTGGATATTGAGTTATAA
ATGATAAAGTTGTTAAAATTCGATATAATTTCTTTGAGGAATTATGTTAA
ATTCTACAAGGCTTAAAAGGTCCATCCTTTTTATAGTTTGTCAAACTCAG
TGAACTTAAAATAACATGCTCTTTTATATGTATAGACCGTATTTTTTCAA
TTCATACTATTGATTCACTGAACATGTCGTTTACAAATGTATTATGATAA
AAGCGCCTTAACGCTATTTATGTATAAACGGTATAACCAAACACTATATT
AAATTTGTTACGTTAGTTTTAGTAAATGGAAACTGTTAGACTGTGACGAA
ACAAATATATGTGTCAACACTTACTTCCAAGAACTACATAGACACAAACA
AAATATACCGATGAGAAAAAAAGAATATAAAGTTTGTAAGTTATTGTGGA
TTTTTTCATAAGATTTGTGATTTGATAAAAAAACACGAAATAAGAATGGT
CTAATATTATATATACCTTTAATCTAAATCATCAGGTATAATTTCAGAGC
GCCTTCCTTTTCAAATAAGGAGTTGTGATAATTGTGTATATTAACATTGA
CAAATGTTTTATGTATAAAATAAGTAAAAGATTCCTAAAGTATTGAATAT
ATTAATTTTGTTCGGCTTAATATATACTATCACAATTTTAATAAAATGGC
TAGTGCTTAGTCACTTTTTAAACTTCTGCAGGGGGACTTAAGCATTAAAA
ATATTATTTAATTTAAAGTAATTGGCAATTTATAAAATAAAAACGTATAT
CACTCTGGGCTGTCTACATAATGACAAAAGGCAACAGGAGATTGTGCAAA
CCCAACTGATATATAAACGCATAGCAAAAATGATTCGTTAAAGTTGTCCG
ATCTTCATGAGTGCTACAGCATTGAAAATGTAGTCCAAAAACTAATGTGA
TAATATAATAAGAACTTAATAAATGGGAGAAACAACTTTAAATTAAAAAA
AAAAAAAAAAAAAAAAAATGTGTCCGAAACAATCGTGCATGGGTGGATTT
TACATAGTTTCGACGAATCTAGCATAGTTATAGTACTCAGCGAGTAATGG
GTATGTATACTGTTAGTGCTTTGGTATTAAGAAAAGCTGGGGAAATATTT
TAAGAAAAAATTAGAAGAAATTAACTGGTGACAAATAATGTATCTAGTTT
GGGATTAAAAAACACTTTCAACATTTTTTATTTGCTAAAGAAATCAATAA
ATATCTCATGTTAAATTAATAAATATTTCGATTCCAAGTAGATATAAATC
AAAAAGTGTCGTAAACGTAATTTTCTTCCATCACAAGGCTAAATTAAAAA
AATAAATATTTTGCACCGCACTCAGCACCAATGTAAGTATACCCTTCTTT
ATTACGAACATCCAGTGTGAATGGCAGCTGATATAATAAGCGCGTGTCAA
AAAAACTTACCTTTCATCAATGCAATAATGCTTCTGAATATTGCCAAACA
AAAATATTTTGAGTTTTTATAATATGAACAGACTTAGCACATAACAGATT
TAACTAATTAAACTTTTGAAATTTCTGACTTTGTTGACCAGTGGCACAAA
AGCTACACTCAACTAACTGCTTGGGTATATTTTATCTGCACTTGTAGTGC
TGATTATAACATTTGTATGTATATTTAAATTCGCTGTATATACTACATAT
TTTACTTAAATAAAATTTTGACACAAAAAAAAAAAAAA

RE45331.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:31:45
Subject Length Description Subject Range Query Range Score Percent Strand
Mitf-RA 4200 Mitf-RA 28..4053 1..4024 20035 99.9 Plus
Mitf.g 4184 Mitf.g 28..4053 1..4024 20035 99.9 Plus
Mitf.a 4005 Mitf.a 1199..4005 1220..4024 13955 99.9 Plus
Mitf.a 4005 Mitf.a 1..1199 1..1199 5980 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:33:53
Subject Length Description Subject Range Query Range Score Percent Strand
chr4 1351717 chr4 1225796..1228046 1777..4024 11125 99.8 Plus
chr4 1351717 chr4 1223834..1224262 770..1198 2145 100 Plus
chr4 1351717 chr4 1223268..1223600 319..651 1665 100 Plus
chr4 1351717 chr4 1219332..1219649 1..318 1575 99.7 Plus
chr4 1351717 chr4 1225286..1225528 1380..1622 1215 100 Plus
chr4 1351717 chr4 1225069..1225228 1220..1379 800 100 Plus
chr4 1351717 chr4 1225584..1225742 1622..1780 795 100 Plus
chr4 1351717 chr4 1223647..1223773 647..773 620 99.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:58:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:33:50
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 1222218..1224467 1777..4024 11135 99.9 Plus
4 1348131 4 1220260..1220688 770..1198 2145 100 Plus
4 1348131 4 1219694..1220026 319..651 1665 100 Plus
4 1348131 4 1198858..1199175 1..318 1575 99.7 Plus
4 1348131 4 1221708..1221950 1380..1622 1215 100 Plus
4 1348131 4 1221491..1221650 1220..1379 800 100 Plus
4 1348131 4 1222006..1222164 1622..1780 795 100 Plus
4 1348131 4 1220073..1220199 647..773 620 99.2 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:59:58
Subject Length Description Subject Range Query Range Score Percent Strand
4 1331231 4 1205318..1207567 1777..4024 11155 99.8 Plus
4 1331231 4 1203360..1203788 770..1198 2145 100 Plus
4 1331231 4 1202794..1203126 319..651 1665 100 Plus
4 1331231 4 1198858..1199175 1..318 1575 99.6 Plus
4 1331231 4 1204808..1205050 1380..1622 1215 100 Plus
4 1331231 4 1204591..1204750 1220..1379 800 100 Plus
4 1331231 4 1205106..1205264 1622..1780 795 100 Plus
4 1331231 4 1203173..1203299 647..773 620 99.2 Plus
Blast to na_te.dros performed 2019-03-16 03:33:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dkoe\Gandalf 979 Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). 756..918 3333..3171 158 62.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6765..6847 331..412 151 66.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6716..6814 315..412 141 61.6 Plus
accord 7404 accord ACCORD 7404bp 1196..1311 3904..4020 141 59 Plus
S-element 1736 S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). 1479..1653 3629..3447 139 57.8 Minus
S-element 1736 S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). 84..199 3447..3564 134 60.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2359..2476 286..411 132 63 Plus
rover 7318 rover ROVER 7318bp 6366..6561 3425..3625 129 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2431..2531 316..419 125 60.6 Plus
G5A 2841 G5A G5A 2841bp 1792..1902 1089..1196 124 60.7 Plus
Tc1-2 1644 Tc1-2 TC1-2 1644bp 1367..1487 3577..3459 123 57 Minus
gypsy12 10218 gypsy12 GYPSY12 10218bp 1744..1861 1129..1012 121 62.6 Minus
gypsy12 10218 gypsy12 GYPSY12 10218bp 9626..9743 1129..1012 121 62.6 Minus
Ivk 5402 Ivk IVK 5402bp 3664..3717 3425..3480 121 73.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2342..2425 329..411 120 61.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2585..2738 347..496 119 57.4 Plus
G5A 2841 G5A G5A 2841bp 552..638 334..420 119 62.5 Plus

RE45331.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:34:29 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
chr4 1219332..1219649 1..318 99 -> Plus
chr4 1223268..1223598 319..649 100 -> Plus
chr4 1223650..1223769 650..769 100 -> Plus
chr4 1223834..1224262 770..1198 100 -> Plus
chr4 1224840..1224860 1199..1219 100 -> Plus
chr4 1225069..1225228 1220..1379 100 -> Plus
chr4 1225286..1225527 1380..1621 100 -> Plus
chr4 1225584..1225742 1622..1780 100 -> Plus
chr4 1225800..1228046 1781..4024 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:18:18 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
Mitf-RB 1..2193 158..2350 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:52:09 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
Mitf-RB 1..2193 158..2350 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:46:50 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
Mitf-RA 1..2193 158..2350 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:18:04 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
Mitf-RB 1..2193 158..2350 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:09:10 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
Mitf-RA 1..2193 158..2350 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:15:44 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
Mitf-RA 1..4026 1..4024 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:52:09 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
Mitf-RA 1..4026 1..4024 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:46:50 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
Mitf-RA 7..4032 1..4024 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:18:04 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
Mitf-RA 1..4026 1..4024 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:09:10 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
Mitf-RA 7..4032 1..4024 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:34:29 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
4 1198858..1199175 1..318 99 -> Plus
4 1219694..1220024 319..649 100 -> Plus
4 1220076..1220195 650..769 100 -> Plus
4 1220260..1220688 770..1198 100 -> Plus
4 1221262..1221282 1199..1219 100 -> Plus
4 1221491..1221650 1220..1379 100 -> Plus
4 1221708..1221949 1380..1621 100 -> Plus
4 1222006..1222164 1622..1780 100 -> Plus
4 1222222..1224467 1781..4024 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:34:29 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
4 1198858..1199175 1..318 99 -> Plus
4 1219694..1220024 319..649 100 -> Plus
4 1220076..1220195 650..769 100 -> Plus
4 1220260..1220688 770..1198 100 -> Plus
4 1221262..1221282 1199..1219 100 -> Plus
4 1221491..1221650 1220..1379 100 -> Plus
4 1221708..1221949 1380..1621 100 -> Plus
4 1222006..1222164 1622..1780 100 -> Plus
4 1222222..1224467 1781..4024 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:34:29 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
4 1198858..1199175 1..318 99 -> Plus
4 1219694..1220024 319..649 100 -> Plus
4 1220076..1220195 650..769 100 -> Plus
4 1220260..1220688 770..1198 100 -> Plus
4 1221262..1221282 1199..1219 100 -> Plus
4 1221491..1221650 1220..1379 100 -> Plus
4 1221708..1221949 1380..1621 100 -> Plus
4 1222006..1222164 1622..1780 100 -> Plus
4 1222222..1224467 1781..4024 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:46:50 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
arm_4 1225732..1225890 1622..1780 100 -> Plus
arm_4 1225434..1225675 1380..1621 100 -> Plus
arm_4 1219484..1219801 1..318 99 -> Plus
arm_4 1223420..1223750 319..649 100 -> Plus
arm_4 1223802..1223921 650..769 100 -> Plus
arm_4 1223986..1224414 770..1198 100 -> Plus
arm_4 1224988..1225008 1199..1219 100 -> Plus
arm_4 1225217..1225376 1220..1379 100 -> Plus
arm_4 1225948..1228193 1781..4024 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:52:12 Download gff for RE45331.complete
Subject Subject Range Query Range Percent Splice Strand
4 1198858..1199175 1..318 99 -> Plus
4 1202794..1203124 319..649 100 -> Plus
4 1203176..1203295 650..769 100 -> Plus
4 1203360..1203788 770..1198 100 -> Plus
4 1204362..1204382 1199..1219 100 -> Plus
4 1204591..1204750 1220..1379 100 -> Plus
4 1204808..1205049 1380..1621 100 -> Plus
4 1205106..1205264 1622..1780 100 -> Plus
4 1205322..1207567 1781..4024 99   Plus

RE45331.pep Sequence

Translation from 157 to 2349

> RE45331.pep
MTESGIDLGFDMEFDLNINLLNDNDNMDFLPNVTENMEFYELKSSSRCIR
HNEIPTFKTATPTSRTQLKLQLQREQQQQMMIQQQTLDTAMDPKMHLLFG
SGQGLMESEFIDSGSTSACGSGSSSLEQMSQLVQMDNLIDSSSGAKLKVP
LQSIGVDVPPQVLQVSTVLENPTRYHVIQKQKNQVRQYLSESFKPSMWGS
HTSEIKLANNSASTGNLQNSSLQKGICDPLERTNRFGCDSAVSAKRIMPS
DDAMPISPFGGSFVRCDDINPIEPTVLRPNSHGAGEPENAHRTAQLGLSK
ANSSLSSTRSSSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSELPS
FDSDPDDIFDDILQNDSFNFDKNFNSELSIKQEPQNLTDAEMNALAKDRQ
KKDNHNMIERRRRFNINDRIKELGTLLPKGSDAFYEVVRDIRPNKGTILK
SSVDYIKCLKHEVTRLRQNELRQRQVELQNRKLMSRIKELEMQAKSHGIL
LSENHLTSLSAPTQPYLKSFSLSPTASRSRRSLFDQPVEKKIQVIDGADG
NMGMNQVDEFMEDCKYAVQGGDPMLSSHSHMQSAPQSPSSKTLNSGSFEP
KNFSEADESLFRGKSSLASDDCCGINCSTSCYIQHQLTSREGHPNHSHHT
GIREIHSLSDSAQNSEFSRLEHCDDPLLSSSHRSLGTVDEDQHNSVDMSA
VMVHDSLSSLVDDNNSETMVLASDTLDIEL*

RE45331.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23419-PA 723 GF23419-PA 1..723 1..730 2057 60.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:09:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16411-PA 735 GG16411-PA 1..735 1..730 3159 88.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:09:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23990-PA 814 GH23990-PA 294..814 141..730 1190 52 Plus
Dgri\GH23990-PA 814 GH23990-PA 1..93 1..92 202 51.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:17:24
Subject Length Description Subject Range Query Range Score Percent Strand
Mitf-PB 730 CG17469-PB 1..730 1..730 3736 100 Plus
Mitf-PA 730 CG17469-PA 1..730 1..730 3736 100 Plus
Mitf-PD 704 CG43369-PD 1..704 1..730 3561 96.4 Plus
Mitf-PC 837 CG43369-PC 169..837 55..730 3395 99 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:09:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14117-PA 750 GI14117-PA 1..750 1..730 1593 55.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:09:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18375-PA 670 GL18375-PA 263..670 332..730 1319 65.4 Plus
Dper\GL18375-PA 670 GL18375-PA 1..276 1..270 895 71.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:09:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27856-PA 834 GA27856-PA 148..834 55..730 2085 66.5 Plus
Dpse\GA27856-PA 834 GA27856-PA 1..60 1..54 221 75 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:09:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13030-PA 730 GM13030-PA 1..730 1..730 3322 95.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:09:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24380-PA 388 GD24380-PA 5..388 347..730 1933 94.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:09:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14595-PA 894 GJ14595-PA 223..894 55..730 1489 56.6 Plus
Dvir\GJ14595-PA 894 GJ14595-PA 1..59 1..54 201 70 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:09:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13654-PA 735 GK13654-PA 1..735 1..730 1701 58 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:09:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14571-PA 738 GE14571-PA 1..738 1..730 3073 86.7 Plus

RE45331.hyp Sequence

Translation from 157 to 2349

> RE45331.hyp
MTESGIDLGFDMEFDLNINLLNDNDNMDFLPNVTENMEFYELKSSSRCIR
HNEIPTFKTATPTSRTQLKLQLQREQQQQMMIQQQTLDTAMDPKMHLLFG
SGQGLMESEFIDSGSTSACGSGSSSLEQMSQLVQMDNLIDSSSGAKLKVP
LQSIGVDVPPQVLQVSTVLENPTRYHVIQKQKNQVRQYLSESFKPSMWGS
HTSEIKLANNSASTGNLQNSSLQKGICDPLERTNRFGCDSAVSAKRIMPS
DDAMPISPFGGSFVRCDDINPIEPTVLRPNSHGAGEPENAHRTAQLGLSK
ANSSLSSTRSSSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSELPS
FDSDPDDIFDDILQNDSFNFDKNFNSELSIKQEPQNLTDAEMNALAKDRQ
KKDNHNMIERRRRFNINDRIKELGTLLPKGSDAFYEVVRDIRPNKGTILK
SSVDYIKCLKHEVTRLRQNELRQRQVELQNRKLMSRIKELEMQAKSHGIL
LSENHLTSLSAPTQPYLKSFSLSPTASRSRRSLFDQPVEKKIQVIDGADG
NMGMNQVDEFMEDCKYAVQGGDPMLSSHSHMQSAPQSPSSKTLNSGSFEP
KNFSEADESLFRGKSSLASDDCCGINCSTSCYIQHQLTSREGHPNHSHHT
GIREIHSLSDSAQNSEFSRLEHCDDPLLSSSHRSLGTVDEDQHNSVDMSA
VMVHDSLSSLVDDNNSETMVLASDTLDIEL*

RE45331.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:46:07
Subject Length Description Subject Range Query Range Score Percent Strand
Mitf-PB 730 CG17469-PB 1..730 1..730 3736 100 Plus
Mitf-PA 730 CG17469-PA 1..730 1..730 3736 100 Plus
Mitf-PD 704 CG43369-PD 1..704 1..730 3561 96.4 Plus
Mitf-PC 837 CG43369-PC 169..837 55..730 3395 99 Plus