BDGP Sequence Production Resources |
Search the DGRC for RE45482
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 454 |
Well: | 82 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG2846-RA |
Protein status: | RE45482.pep: gold |
Preliminary Size: | 741 |
Sequenced Size: | 1001 |
Gene | Date | Evidence |
---|---|---|
CG2846 | 2001-12-14 | Blastp of sequenced clone |
CG2846 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2846 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2846 | 2008-04-29 | Release 5.5 accounting |
CG2846 | 2008-08-15 | Release 5.9 accounting |
CG2846 | 2008-12-18 | 5.12 accounting |
1001 bp (1001 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071393
> RE45482.complete ATGAATGCGGAAAATTTGTCTGTGTGTTTATGAATATTATGCCGATCAAT GGAACGAGGAATAGTTATGTGAGTGGCTACGCGGCAATCACAACATACGT ACTCTGTAGAAAACCCCGCTTGACTCCTTGCCAGACTCGATAAATTGGCC CGCAGCGCTTTGCGGTTGCACAGAATACCGCAAATCAACCGCCCATTGGC CCCTGATATTCATTTCAAGCGCCAGCACAGCAGATCTGGGTCAGATTGCA AGGAAATCTGGGAAATGCTGAGCCAACTGCCTCTGTTCGCTGGGGGCGAG ATTGTTCGGGGCTTCGGACGCGGCTCCAAAGAGCTGGGCATCCCAACAGC TAACTTTCCGCTGGAGGTGGTGAAATCGCTGCCGGAATCCCTGCCCACTG GCGCGTACTACGGTTGGGCAAACGTGGATAATGGACCCGTGCACAAGATG GTCCTCAGCATCGGCTGGAATCCCTTCTACAACAACAAGGAGAAGAGCGT GGAGACGCACATGCTACACGACTTTAACTGTGACCTTTACGGCCAGACAC TCAAGATATGCATTGTAGGCTACCTGCGACCGGAGCGCAGTTTCGACTCC CTGGAGTCACTGATTGCCGCCATCCGCGGGGACATCGAGCAGGCCAAGGC GTTCCTCGACGAGGCGGACAAGGCCAAGCTGAAGGAGGCTCCGTTCTTTA CGGAGAAGCTCTGCTCGTCGAAATAGCGATGGCGTAGGTCAGTCTGGAAA AGGAGGCTTTGCTGAAGGACGCACTACTACTCTTCGCACGGCTTTGAAAT AGTTATTCCATCAGTTATCTTATCTCTCAATTTGCGCGATGTGCAAAGCG GAATTCGAATATCGAATCAAGTACTTAAGCTAAACGTTTTCATTAAATTC CTACTGCTCATAATGACACCAACAAATTGAACCAATCGCATTTCAGTTTG ATACTTATCAAATGTATAAAAGAAACCGTTTTTGCAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2846-RA | 1263 | CG2846-RA | 67..1056 | 1..990 | 4935 | 99.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 3738265..3738900 | 350..985 | 99 | <- | Minus |
chr3R | 3738965..3739313 | 1..349 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2846-RA | 1..462 | 265..726 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2846-RA | 1..462 | 265..726 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2846-RA | 1..462 | 265..726 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2846-RA | 1..462 | 265..726 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2846-RA | 1..462 | 265..726 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2846-RA | 1..984 | 1..985 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2846-RA | 1..984 | 1..985 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2846-RA | 14..997 | 1..985 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2846-RA | 1..984 | 1..985 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2846-RA | 14..997 | 1..985 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7912929..7913277 | 1..349 | 100 | Minus | |
3R | 7912229..7912864 | 350..985 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7912929..7913277 | 1..349 | 100 | Minus | |
3R | 7912229..7912864 | 350..985 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7912929..7913277 | 1..349 | 100 | Minus | |
3R | 7912229..7912864 | 350..985 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 3738651..3738999 | 1..349 | 100 | Minus | |
arm_3R | 3737951..3738586 | 350..985 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7653060..7653695 | 350..985 | 99 | <- | Minus |
3R | 7653760..7654108 | 1..349 | 100 | Minus |
Translation from 264 to 725
> RE45482.pep MLSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYG WANVDNGPVHKMVLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICI VGYLRPERSFDSLESLIAAIRGDIEQAKAFLDEADKAKLKEAPFFTEKLC SSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16845-PA | 154 | GF16845-PA | 1..151 | 1..150 | 680 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24851-PA | 153 | GG24851-PA | 1..153 | 1..153 | 775 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19022-PA | 152 | GH19022-PA | 1..149 | 1..149 | 603 | 71.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2846-PB | 153 | CG2846-PB | 1..153 | 1..153 | 807 | 100 | Plus |
CG2846-PA | 153 | CG2846-PA | 1..153 | 1..153 | 807 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22835-PA | 149 | GI22835-PA | 1..148 | 1..148 | 597 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12140-PA | 155 | GL12140-PA | 1..147 | 1..147 | 657 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15482-PA | 155 | GA15482-PA | 1..147 | 1..147 | 657 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10446-PA | 153 | GM10446-PA | 1..153 | 1..153 | 801 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19451-PA | 153 | GD19451-PA | 1..153 | 1..153 | 812 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24661-PA | 152 | GJ24661-PA | 1..149 | 1..149 | 633 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11049-PA | 152 | GK11049-PA | 1..149 | 1..149 | 662 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25761-PA | 153 | GE25761-PA | 1..153 | 1..153 | 773 | 94.8 | Plus |
Translation from 264 to 725
> RE45482.hyp MLSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYG WANVDNGPVHKMVLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICI VGYLRPERSFDSLESLIAAIRGDIEQAKAFLDEADKAKLKEAPFFTEKLC SSK*