BDGP Sequence Production Resources |
Search the DGRC for RE45537
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 455 |
Well: | 37 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Tgi-RB |
Protein status: | RE45537.pep: gold |
Preliminary Size: | 1608 |
Sequenced Size: | 1916 |
Gene | Date | Evidence |
---|---|---|
CG10741 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10741 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10741 | 2003-08-12 | Blastp of sequenced clone |
CG10741 | 2008-04-29 | Release 5.5 accounting |
CG10741 | 2008-08-15 | Release 5.9 accounting |
CG10741 | 2008-12-18 | 5.12 accounting |
1916 bp (1916 high quality bases) assembled on 2003-08-12
GenBank Submission: BT011029
> RE45537.complete GACTTTGGCCATCGATGTTACATCGACGTATCTTCCAGCTCTAACGCGAA CTGAACTATTATTGCAATTATACCAAAAATCATCGAACCCCCGCTTTTCC CAGCGCAAATCGTGAAAAGTCGGTGAAAATTAGCGAGGATAAATCGCCGT ACAGCTGAGGAGCAGGATTCCAGCGAGGATTTGAAGGCGCACACCTGGCG AAAGTGTGAAACTCATGCGGTGCAGATCGAGTCGGTGCAGGAGCAGCGAA ACCAAGTCCAAGTCCAACTCCAAATCCACGTCCAATCCCACGTAGAAGCG TTGAGATCATCATGGAAACGGCGCTGGATGTACTCTCTAGAGCGGCGACC ATGGTGCAAAACAATCCCAGCGAGATGCGTGCGACGTCCAAGGTGCTGAC CACCACCAAATGGCGACGCGAGCGGCGTCAGCGTAGTGCCGGATACCAGC CGCACGAGGCAGGCAACAGCGAGAGGGAGCGGGAACGGGAGCGGGATCGA GAGGATCGCGACATGGACAGTCCCATTGACATGTCGGTGACGACGGGAGC TCTGAAGCAGAGAGCCTCACCGCCGCCACCCTATCGCGAACCCTTGCCTG GGACCAACTACGCGGCCAACAGTCGACCCAGCGTCATTACCCAGGCTCCA CCCAAGCGAGAACCACCGGAGCAGGCCCACTCTACAGATATGGCGATGTG CGACATTGACGAGCACTTCCGACGCTCACTGGGCGAGAACTATGCTGCCC TGTTCGCCAAGAAGTCACCGACGCCTACGCCAACACCCACGCCCTCGCCA AGTGGTACACCTAAGCAGCAGGTTTCGCCACTGGCCTACGGACTGCCTTC ATCAACCAGCACAGCGGCATCGCAGCACTACCAGCAGCAACGCTCGCCGC TGGCCAAGTCGGGATGGGTCATTCTGGAGCCCGAATCGCTGCAGCCGGAA CTGCCGCCGCCGCAGGAGGAACCGCTTCCCCTGTCGCTGGCACTGCATCG CACCCAAACGCCGCCATCGCCGCCACCTTCGGCCACGGGATCGGCACCAG CGCTACCCACGGCCGTCAGCCAGGTGATGGAGGCAGCGGTGGCGGGCAGG CGGATCCTGGACACGCCACACCACACGCCGCCGAGATACAACACACCACC GCCTCCACCGCCGGCTTACGGAATAGCCGGAACCACCGTTGTGGCGCCGA CTTTGACACCGACACCAACTCCGAATCCGACGCCGTCGCAGATTCCCACG CCCACGCCCAGCATGCCGGCCATCATTCGGGTGAAGGCTGAACCGGGACT GGCGGCCGTGGCTGCCTCCTCGACGCAGACGCCGCCCGCTTCGCCCACCT CGTCCACGAATATCTCGATATTCACCAAGACTGAAGCCTCGGTGGACGAC CACTTTGCCAAGGCGCTGGGCGAAACTTGGAAGAAGCTGCAGGGCGGGCA CAAGGAGTAGAGGAGGAGCAAGCGAGCAAATCACCCACCAACCCGCACAC AACCCGATCCCGATCCCGATCCCAATTCCCAACAGAACTCAACACAACCC AACCCAAAAGCAACCCCTGATCCTCAACGATTCAACTCAAGAGCTGTTTT TATTATAAATATTTCAAACTACACAATTAACGTTTAAAGATCTCATGCTG ATGTGAACGGAAATTCTTCAACTGCGAGTGTATTACAAGTTTCTGATATA ATGATTTTATTGAATATTGATAACGGTTAGCGCGCGGATATAATTATATA TATATATATATGAATATTTACATATATATGGATAAATGTGTATGACAAAG TGTATACGTACAAGTGACAAAATTTTGTATTCTTAACGCTTAGTTGGTAG AGACTAATCCTTAATAATATACCTATTAAACATAAGTAAACAATCCTAAG AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 13491509..13492718 | 685..1898 | 5945 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 13491128..13491443 | 372..687 | 1550 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 13477019..13477222 | 1..204 | 1020 | 100 | Plus |
chr3L | 24539361 | chr3L | 13477776..13477945 | 203..372 | 850 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 13501280..13502493 | 685..1898 | 6070 | 100 | Plus |
3L | 28110227 | 3L | 13500899..13501214 | 372..687 | 1580 | 100 | Plus |
3L | 28110227 | 3L | 13486804..13487007 | 1..204 | 1020 | 100 | Plus |
3L | 28110227 | 3L | 13487561..13487730 | 203..372 | 850 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 13494380..13495593 | 685..1898 | 6070 | 100 | Plus |
3L | 28103327 | 3L | 13493999..13494314 | 372..687 | 1580 | 100 | Plus |
3L | 28103327 | 3L | 13479904..13480107 | 1..204 | 1020 | 100 | Plus |
3L | 28103327 | 3L | 13480661..13480830 | 203..372 | 850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 13477019..13477222 | 1..204 | 100 | -> | Plus |
chr3L | 13477778..13477945 | 205..372 | 100 | -> | Plus |
chr3L | 13491129..13491443 | 373..687 | 99 | -> | Plus |
chr3L | 13491512..13492311 | 688..1487 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10741-RB | 1..1149 | 312..1460 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10741-RB | 1..1149 | 312..1460 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10741-RB | 1..1149 | 312..1460 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10741-RB | 1..1149 | 312..1460 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tgi-RB | 1..1149 | 312..1460 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10741-RB | 1..1809 | 1..1809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10741-RB | 1..1809 | 1..1809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10741-RB | 8..1904 | 1..1897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10741-RB | 1..1809 | 1..1809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tgi-RB | 8..1904 | 1..1897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13486804..13487007 | 1..204 | 100 | -> | Plus |
3L | 13487563..13487730 | 205..372 | 100 | -> | Plus |
3L | 13500900..13501214 | 373..687 | 100 | -> | Plus |
3L | 13501283..13502493 | 688..1900 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13486804..13487007 | 1..204 | 100 | -> | Plus |
3L | 13487563..13487730 | 205..372 | 100 | -> | Plus |
3L | 13500900..13501214 | 373..687 | 100 | -> | Plus |
3L | 13501283..13502493 | 688..1900 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13486804..13487007 | 1..204 | 100 | -> | Plus |
3L | 13487563..13487730 | 205..372 | 100 | -> | Plus |
3L | 13500900..13501214 | 373..687 | 100 | -> | Plus |
3L | 13501283..13502493 | 688..1900 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 13479904..13480107 | 1..204 | 100 | -> | Plus |
arm_3L | 13480663..13480830 | 205..372 | 100 | -> | Plus |
arm_3L | 13494000..13494314 | 373..687 | 100 | -> | Plus |
arm_3L | 13494383..13495593 | 688..1900 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13494000..13494314 | 373..687 | 100 | -> | Plus |
3L | 13494383..13495593 | 688..1900 | 99 | Plus | |
3L | 13479904..13480107 | 1..204 | 100 | -> | Plus |
3L | 13480663..13480830 | 205..372 | 100 | -> | Plus |
Translation from 311 to 1459
> RE45537.pep METALDVLSRAATMVQNNPSEMRATSKVLTTTKWRRERRQRSAGYQPHEA GNSERERERERDREDRDMDSPIDMSVTTGALKQRASPPPPYREPLPGTNY AANSRPSVITQAPPKREPPEQAHSTDMAMCDIDEHFRRSLGENYAALFAK KSPTPTPTPTPSPSGTPKQQVSPLAYGLPSSTSTAASQHYQQQRSPLAKS GWVILEPESLQPELPPPQEEPLPLSLALHRTQTPPSPPPSATGSAPALPT AVSQVMEAAVAGRRILDTPHHTPPRYNTPPPPPPAYGIAGTTVVAPTLTP TPTPNPTPSQIPTPTPSMPAIIRVKAEPGLAAVAASSTQTPPASPTSSTN ISIFTKTEASVDDHFAKALGETWKKLQGGHKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23470-PA | 555 | GF23470-PA | 162..555 | 21..382 | 686 | 65.5 | Plus |
Dana\GF10943-PA | 493 | GF10943-PA | 343..475 | 8..152 | 363 | 57.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15649-PA | 545 | GG15649-PA | 171..545 | 20..382 | 1253 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14822-PA | 416 | GH14822-PA | 1..416 | 1..382 | 723 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tgi-PB | 382 | CG10741-PB | 1..382 | 1..382 | 2011 | 100 | Plus |
Tgi-PA | 535 | CG10741-PA | 173..535 | 20..382 | 1919 | 100 | Plus |
CG15021-PA | 420 | CG15021-PA | 69..260 | 79..319 | 165 | 27.7 | Plus |
Jarid2-PD | 2351 | CG3654-PD | 795..1114 | 53..357 | 161 | 26.4 | Plus |
CG15021-PA | 420 | CG15021-PA | 57..206 | 155..319 | 159 | 32.4 | Plus |
CG15021-PA | 420 | CG15021-PA | 151..386 | 87..349 | 153 | 26.1 | Plus |
CG15023-PC | 168 | CG15023-PC | 56..151 | 207..316 | 148 | 35.1 | Plus |
CG15023-PD | 169 | CG15023-PD | 57..152 | 207..316 | 148 | 35.1 | Plus |
CG15023-PB | 169 | CG15023-PB | 57..152 | 207..316 | 148 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13928-PA | 416 | GI13928-PA | 1..416 | 1..382 | 745 | 49.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22083-PA | 407 | GL22083-PA | 1..407 | 1..382 | 892 | 68.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10535-PA | 594 | GA10535-PA | 206..594 | 21..382 | 802 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25426-PA | 534 | GM25426-PA | 170..534 | 20..382 | 1851 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14454-PA | 549 | GD14454-PA | 185..549 | 20..382 | 1864 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13716-PA | 392 | GJ13716-PA | 1..389 | 1..378 | 889 | 55.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17075-PA | 568 | GK17075-PA | 140..551 | 5..377 | 703 | 59.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21976-PA | 578 | GE21976-PA | 215..578 | 20..382 | 1224 | 95.1 | Plus |
Translation from 311 to 1459
> RE45537.hyp METALDVLSRAATMVQNNPSEMRATSKVLTTTKWRRERRQRSAGYQPHEA GNSERERERERDREDRDMDSPIDMSVTTGALKQRASPPPPYREPLPGTNY AANSRPSVITQAPPKREPPEQAHSTDMAMCDIDEHFRRSLGENYAALFAK KSPTPTPTPTPSPSGTPKQQVSPLAYGLPSSTSTAASQHYQQQRSPLAKS GWVILEPESLQPELPPPQEEPLPLSLALHRTQTPPSPPPSATGSAPALPT AVSQVMEAAVAGRRILDTPHHTPPRYNTPPPPPPAYGIAGTTVVAPTLTP TPTPNPTPSQIPTPTPSMPAIIRVKAEPGLAAVAASSTQTPPASPTSSTN ISIFTKTEASVDDHFAKALGETWKKLQGGHKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tgi-PB | 382 | CG10741-PB | 1..382 | 1..382 | 2011 | 100 | Plus |
Tgi-PA | 535 | CG10741-PA | 173..535 | 20..382 | 1919 | 100 | Plus |
CG15021-PA | 420 | CG15021-PA | 69..260 | 79..319 | 165 | 27.7 | Plus |
Jarid2-PD | 2351 | CG3654-PD | 795..1114 | 53..357 | 161 | 26.4 | Plus |
CG15021-PA | 420 | CG15021-PA | 57..206 | 155..319 | 159 | 32.4 | Plus |
CG15021-PA | 420 | CG15021-PA | 151..386 | 87..349 | 153 | 26.1 | Plus |
CG15023-PC | 168 | CG15023-PC | 56..151 | 207..316 | 148 | 35.1 | Plus |