BDGP Sequence Production Resources |
Search the DGRC for RE46159
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 461 |
Well: | 59 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14968-RA |
Protein status: | RE46159.pep: gold |
Preliminary Size: | 600 |
Sequenced Size: | 950 |
Gene | Date | Evidence |
---|---|---|
CG14968 | 2001-12-17 | Blastp of sequenced clone |
CG14968 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14968 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14968 | 2008-04-29 | Release 5.5 accounting |
CG14968 | 2008-08-15 | Release 5.9 accounting |
CG14968 | 2008-12-18 | 5.12 accounting |
950 bp (950 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071394
> RE46159.complete AGTGGCGCGTTTACCGGCCGAGGAAACAGGTGTACAAAGAAACAAAGCCA TCATAAAATCGTTGGTTTGCGGTGAATGCGTTCAACGGTGGATCTTCGCT TGCACCTTTCGCGATAGACGACATACGGATGCAGATACAGCTACAGAATG GCCTCCAACAACAGTAGTACCACCGATCTGGACAGCCAGGTCAATGTGGA GGATTTGCCCATAACGTTCAAGGTGAAGTACATTGGTTCCGAAGTGGCAC GTGGCTTATGGGGCATTAAGTATACGCGTCGTCCGGTGGACATAATGGTG GGCGTGGCCAAGAACCTGCCGCCCAATAAGGTGCTGCCCAACTGCGAACT GAAGGTGTCCACCGACGGAGTCCAGCTGGAGATCATATCGCCAAAGGCCA GCATCAATCACTGGAGCTATCCCATCGACACGATCTCGTATGGCGTTCAG GACCTGGTCTACACAAGGGTCTTTGCCATGATCGTGGTGAAGGACGAGTC GAGTCCGCATCCCTTTGAGGTTCACGCCTTCGTGTGCGACAGTCGTGCGA TGGCGCGGAAGTTGACCTTTGCCCTGGCCGCCGCCTTCCAGGATTACTCG CGACGGGTCAAGGAGGCAACCGGTGAGGAGGAGGGCGAGGCCACGCCCAG CGACACTATTACACCCACGCGACACAAGTTCGCCATCGATCTGCGAACGC CGGAGGAAATCCAGGCTGGCGAACTGGAGCAAGAAACGGAGGCGTAGTTA TCCTGGTGATCCTGCGTTGGCTCCGTCAATGAGATGTGATGTGTTAGTTA CTTAACGTCCAGTGTTCACTGTATCTGTAAATTGTGGTTCTCTCACCTGG TAGTTGCCTCATACAGCTAATTACCCAAAGCCTAAGTGTTAATACGATTT GTAAACGATTTTCTAAAATAAATTACGAATATGGCAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14968-RB | 1115 | CG14968-RB | 124..1057 | 1..934 | 4625 | 99.6 | Plus |
CG14968-RC | 1063 | CG14968-RC | 132..1005 | 61..934 | 4340 | 99.7 | Plus |
CG14968-RA | 1104 | CG14968-RA | 218..1091 | 61..934 | 4340 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3298731..3299444 | 934..221 | 3555 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 3300110..3300275 | 226..61 | 815 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 3302450..3302510 | 61..1 | 260 | 95.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3298730..3299442 | 223..935 | 99 | <- | Minus |
chr3L | 3300114..3300274 | 62..222 | 99 | <- | Minus |
chr3L | 3302450..3302510 | 1..61 | 95 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14968-RD | 1..600 | 148..747 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14968-RD | 1..600 | 148..747 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14968-RD | 1..600 | 148..747 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14968-RD | 1..600 | 148..747 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14968-RB | 1..934 | 1..934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14968-RB | 1..934 | 1..934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14968-RB | 5..938 | 1..934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14968-RB | 1..934 | 1..934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14968-RB | 5..938 | 1..934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3299335..3300047 | 223..935 | 99 | <- | Minus |
3L | 3300723..3300883 | 62..222 | 99 | <- | Minus |
3L | 3303048..3303108 | 1..61 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3299335..3300047 | 223..935 | 99 | <- | Minus |
3L | 3300723..3300883 | 62..222 | 99 | <- | Minus |
3L | 3303048..3303108 | 1..61 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3299335..3300047 | 223..935 | 99 | <- | Minus |
3L | 3300723..3300883 | 62..222 | 99 | <- | Minus |
3L | 3303048..3303108 | 1..61 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3299335..3300047 | 223..935 | 99 | <- | Minus |
arm_3L | 3300723..3300883 | 62..222 | 99 | <- | Minus |
arm_3L | 3303048..3303108 | 1..61 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3299335..3300047 | 223..935 | 99 | <- | Minus |
3L | 3300723..3300883 | 62..222 | 99 | <- | Minus |
3L | 3303048..3303108 | 1..61 | 98 | Minus |
Translation from 147 to 746
> RE46159.pep MASNNSSTTDLDSQVNVEDLPITFKVKYIGSEVARGLWGIKYTRRPVDIM VGVAKNLPPNKVLPNCELKVSTDGVQLEIISPKASINHWSYPIDTISYGV QDLVYTRVFAMIVVKDESSPHPFEVHAFVCDSRAMARKLTFALAAAFQDY SRRVKEATGEEEGEATPSDTITPTRHKFAIDLRTPEEIQAGELEQETEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24376-PA | 199 | GF24376-PA | 1..199 | 1..199 | 1000 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14267-PA | 199 | GG14267-PA | 1..199 | 1..199 | 1049 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15704-PA | 210 | GH15704-PA | 21..210 | 10..199 | 903 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14968-PA | 199 | CG14968-PA | 1..199 | 1..199 | 1023 | 100 | Plus |
CG14968-PE | 199 | CG14968-PE | 1..199 | 1..199 | 1023 | 100 | Plus |
CG14968-PD | 199 | CG14968-PD | 1..199 | 1..199 | 1023 | 100 | Plus |
CG14968-PC | 199 | CG14968-PC | 1..199 | 1..199 | 1023 | 100 | Plus |
CG14968-PB | 199 | CG14968-PB | 1..199 | 1..199 | 1023 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12757-PA | 211 | GI12757-PA | 18..211 | 9..199 | 939 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13393-PA | 200 | GA13393-PA | 15..200 | 9..199 | 883 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14060-PA | 199 | GM14060-PA | 1..199 | 1..199 | 1042 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13335-PA | 199 | GD13335-PA | 1..199 | 1..199 | 1038 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15524-PA | 202 | GJ15524-PA | 3..202 | 2..199 | 948 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16607-PA | 213 | GK16607-PA | 8..213 | 4..199 | 905 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20694-PA | 199 | GE20694-PA | 1..199 | 1..199 | 1046 | 98 | Plus |
Translation from 147 to 746
> RE46159.hyp MASNNSSTTDLDSQVNVEDLPITFKVKYIGSEVARGLWGIKYTRRPVDIM VGVAKNLPPNKVLPNCELKVSTDGVQLEIISPKASINHWSYPIDTISYGV QDLVYTRVFAMIVVKDESSPHPFEVHAFVCDSRAMARKLTFALAAAFQDY SRRVKEATGEEEGEATPSDTITPTRHKFAIDLRTPEEIQAGELEQETEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14968-PA | 199 | CG14968-PA | 1..199 | 1..199 | 1023 | 100 | Plus |
CG14968-PE | 199 | CG14968-PE | 1..199 | 1..199 | 1023 | 100 | Plus |
CG14968-PD | 199 | CG14968-PD | 1..199 | 1..199 | 1023 | 100 | Plus |
CG14968-PC | 199 | CG14968-PC | 1..199 | 1..199 | 1023 | 100 | Plus |
CG14968-PB | 199 | CG14968-PB | 1..199 | 1..199 | 1023 | 100 | Plus |