BDGP Sequence Production Resources |
Search the DGRC for RE46214
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 462 |
Well: | 14 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Ice2-RC |
Protein status: | RE46214.pep: gold |
Preliminary Size: | 2245 |
Sequenced Size: | 2362 |
Gene | Date | Evidence |
---|---|---|
CG10825 | 2002-10-12 | Blastp of sequenced clone |
CG10825 | 2008-04-29 | Release 5.5 accounting |
CG10825 | 2008-08-15 | Release 5.9 accounting |
CG10825 | 2008-12-18 | 5.12 accounting |
2362 bp (2362 high quality bases) assembled on 2002-10-12
GenBank Submission: BT001660
> RE46214.complete ATTCTCAATAAAATAATATCGAAGTGCAAACGGCCCCAACAGGTTCCTAA ATAAACGTTTCCTCATTTATTTTATTTACTTTTTAAAATATGCGAGCTTG AAATGGAAATATACCAAACATTATGCACTGCAGCTTATCAACCAATGAAT AGACTTCGCTTTAGACACAAGTTCCTCCCGATGCGAAGTTGTACGAAGGA AATGCTCTATTCCGAAACCAGCCGTCGTACAAGGTGTTCAATAAATCCTT CGAGCACGTGGACGATGCGCTGTACACATCGCTGAACGAAGTGGAGCCAG ATGTACTGCGAATGGAGCTCCAGGAAACGGGCGATCTCTTTAAGTCGTTC AATCGCAACTCGGCCTTGAGGGATCCGCGCAACAACGAGGTGCCACCGAA ACCGACTCGCGACCTCACCACCGCCAGTTCACTCTACAGCTTTCCCAATC CCCTGGAGCAATACTCGGAGCTGAATCTTAAGCAACAGGCCGCCTGCATG CGAGTGCTCCTCGCCTGGCAATGCAGTCAACCCGTCGATGAGCAGGACAT CGTGGTGTGGCAGGCAACGGAAAAGAAGCGATACAACGAGCAGCAGCGTG TGCAGAAATACATACACGACCACGAGCAAGGACGCAAGGAAGTCATCTAC GCGCCCATGAAGAGCCTGGTGGCGGTCTACAGAAAGTGCTGCCCCAGTGC AGGAGTCTCAATGCTCAGACCGCCAGCATAGAGCAGGTGGAGCTGGAGCG GATTGTCGGTCGGGTAAGACTCTTGCCAGAGGTGGAAGTTCGCCATGAAG CCCTGCGGACATTACGACTGCGCTTGGATCGCTATGCGACGAGAGAAACA AGGGCTCCTGTGCAGCTATTGCGGGAGGAAGACAAGGAACTGGAACTCGA AGCTGGCAACGTCTTCGTGCTGCCCCTAGACTCGCTGTTAATGCTCCTTA CCACCGGATCCTATATTGACCTGCCCACCGAAATGTTTCTCAGCCTAAGA GAATCGCCAAACAGCAAGCACAAGTGCATGGAGTTCCAGTCGCCATTCCC CCCCCGCAACTGTGGTTGGCATACGAACAGTTTGATCTTGAAACTGGCTT ATGGAGCCTACATTTCACAGCCCGGACAAGCCAAGTGGCTGGATTTCAAT ATAAATGGAGCAGTCAAGGAGGTGCCAGATGAGCCTGCCTGTGATAAGTC ATCCATCGATCTGCAGATGGTCTACAAGCCTCGCGCAATCGATCAGCAAC CATCAGACATTGAAGATGGCAACTGCAATAGCGCCTTGGTTAGTTGGACC CTTAGATGTAAAGGCGAAGGCGATGATTGCAACGATTTTCAAATCTTTAG CACACTATCCATACCAGCAGTTAAGGATTCCAGCGGCAAGGAACCACTTG GATGCCACTTCATTAAGCTGGAGAACAAGCCAGACTGCGGTTGCGAAATA ATGTCCAAATACGAGTTGATAAGCGCCTGGGTGCAGTTAAAGCTAATGCG GGCAGAGATGGGACACTGCACACGCATCTCGCTACGGGATTTTGAGCCAA TGCTGGAGGAGAAGCTGACGTTAATTTCGCTGGAGCAGCAGCTTCATGAC TATTATAACACAAGTATGCCGCAGCTACTGTCCAACTTGTGTGAGTTTTT GAAGCTGCTGGACACGGTACCCGCTGGAGATTACCTGCTGCGATACTCAC CCAAGTACAAGGATAAGTTCCTGCTGTGCATTGTCACCAAGGAGGCCACG CCACAGAGTTTTCAGCTACACCAGCTCCTCACGGAATCCATCCCCAGCGA CCAAGCCTTCCTTACGCAAAGCAGCTACCTTCCGATCTCGCCCACTCTTT GTGGCCGCCTGCACGAGGAGCTCCATCTACTGCCCTGTGCATTTCCAGCA AAAGCCAACGGTCGCTCTGTCCAGCGTCGAAAGGTGGTGGTGCCCATACC AGAGCCCTCCAGACAAGCTCCAGTAAGACGGCAACGTTTAAAAAAGTGGA GCGAAGCCCAAACTCGAGAATTTCGACGTCGATGTAAGGTGGATCAAAAG AAAAGAGCTCGGGCTCGCAAGACAGCAGCGGCCAACAAAGAAAAAATAGA GCTGGAGAAGATTATGACGTTGTAAAAACCGCACTCTGATTGCATAAGTT GATTACTATTAGGGATGTAGTTACTAACTGTTACAAAACCAAAAGGTGAT CCCCATAGTGGAGTTAACCGCTCGGCGTAAGGATAAGAGTTAAGTTTATA TTGTTATGTATCGGAATAATAAAAATTGAACGCGGTGCTTGTGGCGCGAG CAACAAAGTTTTGATACATTTTGAGATGCACCAGAATTTACACTCATAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10825-RC | 2347 | CG10825-RC | 1..2347 | 1..2347 | 11720 | 99.9 | Plus |
CG10825-RB | 2394 | CG10825-RB | 764..2394 | 688..2318 | 8155 | 100 | Plus |
CG10825-RA | 2427 | CG10825-RA | 808..2427 | 688..2307 | 8100 | 100 | Plus |
CG10825-RB | 2394 | CG10825-RB | 1..688 | 1..688 | 3425 | 99.8 | Plus |
CG10825-RA | 2427 | CG10825-RA | 224..732 | 180..688 | 2530 | 99.8 | Plus |
CG10825-RA | 2427 | CG10825-RA | 1..145 | 36..180 | 725 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 16954909..16956568 | 688..2347 | 8015 | 98.9 | Plus |
chr3R | 27901430 | chr3R | 16954325..16954833 | 180..688 | 2410 | 98.2 | Plus |
chr3R | 27901430 | chr3R | 16954067..16954246 | 1..180 | 870 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 21131061..21132721 | 688..2348 | 8305 | 100 | Plus |
3R | 32079331 | 3R | 21130477..21130985 | 180..688 | 2530 | 99.8 | Plus |
3R | 32079331 | 3R | 21130219..21130398 | 1..180 | 900 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 20871892..20873552 | 688..2348 | 8305 | 100 | Plus |
3R | 31820162 | 3R | 20871308..20871816 | 180..688 | 2530 | 99.8 | Plus |
3R | 31820162 | 3R | 20871050..20871229 | 1..180 | 900 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 753..814 | 618..556 | 123 | 70.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 16954067..16954245 | 1..179 | 98 | -> | Plus |
chr3R | 16954325..16954833 | 180..688 | 98 | -> | Plus |
chr3R | 16954910..16956568 | 689..2347 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10825-RB | 1..377 | 312..688 | 100 | -> | Plus |
CG10825-RB | 454..1890 | 689..2125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10825-RB | 1..377 | 312..688 | 100 | -> | Plus |
CG10825-RB | 454..1890 | 689..2125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice2-RB | 1..377 | 312..688 | 100 | -> | Plus |
Ice2-RB | 454..1890 | 689..2125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10825-RB | 1..377 | 312..688 | 100 | -> | Plus |
CG10825-RB | 454..1890 | 689..2125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice2-RA | 34..542 | 180..688 | 99 | -> | Plus |
Ice2-RA | 619..2055 | 689..2125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10825-RC | 1..2347 | 1..2347 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10825-RC | 1..2347 | 1..2347 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice2-RC | 1..2347 | 1..2347 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10825-RC | 1..2347 | 1..2347 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice2-RC | 4..2350 | 1..2347 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21130219..21130397 | 1..179 | 100 | -> | Plus |
3R | 21130477..21130985 | 180..688 | 99 | -> | Plus |
3R | 21131062..21132720 | 689..2347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21130219..21130397 | 1..179 | 100 | -> | Plus |
3R | 21130477..21130985 | 180..688 | 99 | -> | Plus |
3R | 21131062..21132720 | 689..2347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21130219..21130397 | 1..179 | 100 | -> | Plus |
3R | 21130477..21130985 | 180..688 | 99 | -> | Plus |
3R | 21131062..21132720 | 689..2347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 16955941..16956119 | 1..179 | 100 | -> | Plus |
arm_3R | 16956199..16956707 | 180..688 | 99 | -> | Plus |
arm_3R | 16956784..16958442 | 689..2347 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20871308..20871816 | 180..688 | 99 | -> | Plus |
3R | 20871893..20873551 | 689..2347 | 100 | Plus | |
3R | 20871050..20871228 | 1..179 | 100 | -> | Plus |
Translation from 940 to 2124
> RE46214.pep MLLTTGSYIDLPTEMFLSLRESPNSKHKCMEFQSPFPPRNCGWHTNSLIL KLAYGAYISQPGQAKWLDFNINGAVKEVPDEPACDKSSIDLQMVYKPRAI DQQPSDIEDGNCNSALVSWTLRCKGEGDDCNDFQIFSTLSIPAVKDSSGK EPLGCHFIKLENKPDCGCEIMSKYELISAWVQLKLMRAEMGHCTRISLRD FEPMLEEKLTLISLEQQLHDYYNTSMPQLLSNLCEFLKLLDTVPAGDYLL RYSPKYKDKFLLCIVTKEATPQSFQLHQLLTESIPSDQAFLTQSSYLPIS PTLCGRLHEELHLLPCAFPAKANGRSVQRRKVVVPIPEPSRQAPVRRQRL KKWSEAQTREFRRRCKVDQKKRARARKTAAANKEKIELEKIMTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16500-PA | 667 | GF16500-PA | 284..667 | 4..394 | 1233 | 60.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24399-PA | 678 | GG24399-PA | 288..678 | 4..394 | 1859 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17292-PA | 659 | GH17292-PA | 289..607 | 6..331 | 933 | 57.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ice2-PC | 394 | CG10825-PC | 1..394 | 1..394 | 2086 | 100 | Plus |
Ice2-PA | 684 | CG10825-PA | 291..684 | 1..394 | 2086 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23872-PA | 669 | GI23872-PA | 290..669 | 6..394 | 835 | 45.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12008-PA | 669 | GL12008-PA | 276..669 | 1..394 | 1248 | 59.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10581-PA | 669 | GA10581-PA | 276..669 | 1..394 | 1246 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15068-PA | 675 | GM15068-PA | 286..675 | 4..394 | 1902 | 93.1 | Plus |
Dsec\GM13640-PA | 223 | GM13640-PA | 1..223 | 171..394 | 1019 | 92.4 | Plus |
Dsec\GM13639-PA | 403 | GM13639-PA | 294..399 | 4..109 | 555 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19400-PA | 676 | GD19400-PA | 286..676 | 4..394 | 1921 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23962-PA | 671 | GJ23962-PA | 288..671 | 4..394 | 960 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19181-PA | 621 | GK19181-PA | 240..621 | 5..394 | 745 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25710-PA | 676 | GE25710-PA | 286..676 | 4..394 | 1909 | 89.3 | Plus |
Translation from 940 to 2124
> RE46214.hyp MLLTTGSYIDLPTEMFLSLRESPNSKHKCMEFQSPFPPRNCGWHTNSLIL KLAYGAYISQPGQAKWLDFNINGAVKEVPDEPACDKSSIDLQMVYKPRAI DQQPSDIEDGNCNSALVSWTLRCKGEGDDCNDFQIFSTLSIPAVKDSSGK EPLGCHFIKLENKPDCGCEIMSKYELISAWVQLKLMRAEMGHCTRISLRD FEPMLEEKLTLISLEQQLHDYYNTSMPQLLSNLCEFLKLLDTVPAGDYLL RYSPKYKDKFLLCIVTKEATPQSFQLHQLLTESIPSDQAFLTQSSYLPIS PTLCGRLHEELHLLPCAFPAKANGRSVQRRKVVVPIPEPSRQAPVRRQRL KKWSEAQTREFRRRCKVDQKKRARARKTAAANKEKIELEKIMTL*