BDGP Sequence Production Resources |
Search the DGRC for RE46702
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 467 |
Well: | 2 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG10660-RA |
Protein status: | RE46702.pep: gold |
Preliminary Size: | 1578 |
Sequenced Size: | 1722 |
Gene | Date | Evidence |
---|---|---|
CG10660 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10660 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10660 | 2008-04-29 | Release 5.5 accounting |
CG10660 | 2008-08-15 | Release 5.9 accounting |
CG10660 | 2008-12-18 | 5.12 accounting |
1722 bp (1722 high quality bases) assembled on 2005-08-03
GenBank Submission: BT023761
> RE46702.complete AATTTATCGCTTCTTCGCCTTTGCGCAATCGAATGGAAAAGCGGATTGCA TTCCATTCCCATACCCGGTTGAAGTAGCAGCCGGATCACCCGGACATCAT GAACAAACTACGGGCCCTGCTGCCCGGCCAACATTCTGGCTCCAATGGAG CATCCCGGCACTCCGTAACTCTGGAGCCGGAGATCGGATTCCAGATCACC ATTGACAATCCAAAAAACAACGATCAGAGCAAGGGTTCCACGGCGGTGCC CGAACTGAATGTCCATCTCATCGCCGCGCGACATTTGCCCTCTCTTTTCG GCTTCAAGATCGTCCAGGGGTATCTTATAAAGGTGAAGCTTTTTCCCGGT TCGAAACGCTTGGACAGCAGCATTCAGACGAATACATGGCCAAAGTTCAA TGAAAATTTCAAGTTTCCCCTGGTGCCGGATATCAAATCCTCTATGAAAC ATGTGGCTCGACGTCCCGCAAATGGACAGGTAAGCAGCTCGGATCAGGAG CCGGAACAACTCTTTTCCGGGCAATTTTTGGTCTTTACGGTCTACGCGCT ACTGGAACTTCCGGCAACGAACTTCAATCGCTTTAACAAGACATACCGCT CGCTAAAAGATAGAAGCACCAGCTTTGTGCAGCGTTTCGTGGATCCAACT GCGAGTGCTCCAAGTGAGGCAAAGACTGAGGCCGGCGGAAAGCCAAGTGA CCAGGGAAAGGGCAGGAAGAAGTCGTCGGAGAGCTCCGCTCGGGATGCGA TGCCACCGCTGACCATCAGTGAATCGCGCAGAAATATAGGTTCCGTCACC TGTTACCTGGAATCGAAGCTCTTCCAGCGCAACAGCCGCACGGGGTGCTA TTCCACGGAAGAGCTGTGGCTGCCTATCAAAGATATCACCACGACGGTGG CCAAGTCGTCACCCAGCAACAACAATTTGGTTAACTCCACCAAGGGTGTG GTCGAACTGGCTCTCGAGGTGCGAGATCTCCTGGAATGTGAGACACCTGT GGATATTTCACTGCCCCCTGCCACGCCCACGAACACGCCCACTACACCAG ATCCTCCATCTCCACTTGCCACCCATGCGACCAACAATTGGCAACGGATG ACCGCCGAAGTGAAGCGGAAAATGGGCATTAGCAATGCCGGCAACAGCGA CTCCGGCAGATACCTGCTCCGGGTGACCACCACACGGATGCGTTGCTCCA ATAAGGTCAAGGATGAGCTGGAGGCCACGGCGAGCTCCGGTGTGTATGTG AAGACCACGGCCTTCGAGCACGGCATCTACATAGACGCCTGGAAGTCCCC CATTTTCTTTCCCTCGCTGTCCACCAAGTGGGACGATGGATCCGGTGAGG GTACGATAGATATACCGCTCCAGAGACTCGATCAGTTGGAGGACATCGTG CTGCGCATCACATTGGCCACCAAGAAGATGGGCAAGAAACTGGTGCTCGG CACCGTCATAGTCGGCGGAGATCAGGCGGGGGATACGGGCTCCGAGCAGA TGCGACTCATCCGGGAATCCCCGCCAGGTCAGCGGGTGGCCGCCTGGCAC TGTTACCACTAAGCCGTACTCAAATCAACACGCCAAACTGAATGTACATA GCAAAAATCCTAAGTTTAATGATATAGAAATTCCCTTGTGCATATATATG TATTTCTGCTGTATGCATTTACTTTGCGATCGTTAAAAATATTAAATTTA ATTGCGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10660-RA | 1793 | CG10660-RA | 66..1773 | 1..1708 | 8540 | 100 | Plus |
CG10660.c | 2499 | CG10660.c | 772..2479 | 1..1708 | 8540 | 100 | Plus |
CG10660.b | 2478 | CG10660.b | 1340..2458 | 590..1708 | 5595 | 100 | Plus |
CG10660.b | 2478 | CG10660.b | 772..1341 | 1..570 | 2850 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 12477294..12478073 | 1706..927 | 3870 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 12480373..12480706 | 334..1 | 1580 | 98.2 | Minus |
chr3L | 24539361 | chr3L | 12479186..12479408 | 791..569 | 1070 | 98.7 | Minus |
chr3L | 24539361 | chr3L | 12478709..12478847 | 926..788 | 695 | 100 | Minus |
chr3L | 24539361 | chr3L | 12479461..12479593 | 569..437 | 605 | 97 | Minus |
chr3L | 24539361 | chr3L | 12479644..12479749 | 436..331 | 530 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 12486666..12487447 | 1708..927 | 3910 | 100 | Minus |
3L | 28110227 | 3L | 12489739..12490072 | 334..1 | 1670 | 100 | Minus |
3L | 28110227 | 3L | 12488553..12488775 | 791..569 | 1115 | 100 | Minus |
3L | 28110227 | 3L | 12488083..12488221 | 926..788 | 695 | 100 | Minus |
3L | 28110227 | 3L | 12488828..12488960 | 569..437 | 665 | 100 | Minus |
3L | 28110227 | 3L | 12489012..12489117 | 436..331 | 530 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 12479766..12480547 | 1708..927 | 3910 | 100 | Minus |
3L | 28103327 | 3L | 12482839..12483172 | 334..1 | 1670 | 100 | Minus |
3L | 28103327 | 3L | 12481653..12481875 | 791..569 | 1115 | 100 | Minus |
3L | 28103327 | 3L | 12481183..12481321 | 926..788 | 695 | 100 | Minus |
3L | 28103327 | 3L | 12481928..12482060 | 569..437 | 665 | 100 | Minus |
3L | 28103327 | 3L | 12482112..12482217 | 436..331 | 530 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 12477319..12478073 | 927..1681 | 99 | <- | Minus |
chr3L | 12478709..12478845 | 790..926 | 100 | <- | Minus |
chr3L | 12479188..12479407 | 570..789 | 98 | <- | Minus |
chr3L | 12479461..12479593 | 437..569 | 96 | <- | Minus |
chr3L | 12479644..12479747 | 333..436 | 100 | <- | Minus |
chr3L | 12480375..12480706 | 1..332 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10660-RA | 1..1464 | 99..1562 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10660-RA | 1..1464 | 99..1562 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10660-RA | 1..1464 | 99..1562 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10660-RA | 1..1464 | 99..1562 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10660-RA | 1..1464 | 99..1562 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10660-RA | 17..1722 | 1..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10660-RA | 17..1722 | 1..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10660-RA | 4..1709 | 1..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10660-RA | 17..1722 | 1..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10660-RA | 4..1709 | 1..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12489012..12489115 | 333..436 | 100 | <- | Minus |
3L | 12488555..12488774 | 570..789 | 100 | <- | Minus |
3L | 12486668..12487447 | 927..1706 | 100 | <- | Minus |
3L | 12488083..12488219 | 790..926 | 100 | <- | Minus |
3L | 12488828..12488960 | 437..569 | 100 | <- | Minus |
3L | 12489741..12490072 | 1..332 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12489012..12489115 | 333..436 | 100 | <- | Minus |
3L | 12488555..12488774 | 570..789 | 100 | <- | Minus |
3L | 12486668..12487447 | 927..1706 | 100 | <- | Minus |
3L | 12488083..12488219 | 790..926 | 100 | <- | Minus |
3L | 12488828..12488960 | 437..569 | 100 | <- | Minus |
3L | 12489741..12490072 | 1..332 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12489012..12489115 | 333..436 | 100 | <- | Minus |
3L | 12488555..12488774 | 570..789 | 100 | <- | Minus |
3L | 12486668..12487447 | 927..1706 | 100 | <- | Minus |
3L | 12488083..12488219 | 790..926 | 100 | <- | Minus |
3L | 12488828..12488960 | 437..569 | 100 | <- | Minus |
3L | 12489741..12490072 | 1..332 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 12481183..12481319 | 790..926 | 100 | <- | Minus |
arm_3L | 12481655..12481874 | 570..789 | 100 | <- | Minus |
arm_3L | 12481928..12482060 | 437..569 | 100 | <- | Minus |
arm_3L | 12482112..12482215 | 333..436 | 100 | <- | Minus |
arm_3L | 12479768..12480547 | 927..1706 | 100 | <- | Minus |
arm_3L | 12482841..12483172 | 1..332 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12479768..12480547 | 927..1706 | 100 | <- | Minus |
3L | 12481183..12481319 | 790..926 | 100 | <- | Minus |
3L | 12481655..12481874 | 570..789 | 100 | <- | Minus |
3L | 12481928..12482060 | 437..569 | 100 | <- | Minus |
3L | 12482112..12482215 | 333..436 | 100 | <- | Minus |
3L | 12482841..12483172 | 1..332 | 100 | Minus |
Translation from 98 to 1561
> RE46702.hyp MNKLRALLPGQHSGSNGASRHSVTLEPEIGFQITIDNPKNNDQSKGSTAV PELNVHLIAARHLPSLFGFKIVQGYLIKVKLFPGSKRLDSSIQTNTWPKF NENFKFPLVPDIKSSMKHVARRPANGQVSSSDQEPEQLFSGQFLVFTVYA LLELPATNFNRFNKTYRSLKDRSTSFVQRFVDPTASAPSEAKTEAGGKPS DQGKGRKKSSESSARDAMPPLTISESRRNIGSVTCYLESKLFQRNSRTGC YSTEELWLPIKDITTTVAKSSPSNNNLVNSTKGVVELALEVRDLLECETP VDISLPPATPTNTPTTPDPPSPLATHATNNWQRMTAEVKRKMGISNAGNS DSGRYLLRVTTTRMRCSNKVKDELEATASSGVYVKTTAFEHGIYIDAWKS PIFFPSLSTKWDDGSGEGTIDIPLQRLDQLEDIVLRITLATKKMGKKLVL GTVIVGGDQAGDTGSEQMRLIRESPPGQRVAAWHCYH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10660-PC | 487 | CG10660-PC | 1..487 | 1..487 | 2526 | 100 | Plus |
CG10660-PA | 487 | CG10660-PA | 1..487 | 1..487 | 2526 | 100 | Plus |
CG10660-PD | 480 | CG10660-PD | 1..480 | 1..487 | 2468 | 98.6 | Plus |
CG10660-PB | 480 | CG10660-PB | 1..480 | 1..487 | 2468 | 98.6 | Plus |
Translation from 98 to 1561
> RE46702.pep MNKLRALLPGQHSGSNGASRHSVTLEPEIGFQITIDNPKNNDQSKGSTAV PELNVHLIAARHLPSLFGFKIVQGYLIKVKLFPGSKRLDSSIQTNTWPKF NENFKFPLVPDIKSSMKHVARRPANGQVSSSDQEPEQLFSGQFLVFTVYA LLELPATNFNRFNKTYRSLKDRSTSFVQRFVDPTASAPSEAKTEAGGKPS DQGKGRKKSSESSARDAMPPLTISESRRNIGSVTCYLESKLFQRNSRTGC YSTEELWLPIKDITTTVAKSSPSNNNLVNSTKGVVELALEVRDLLECETP VDISLPPATPTNTPTTPDPPSPLATHATNNWQRMTAEVKRKMGISNAGNS DSGRYLLRVTTTRMRCSNKVKDELEATASSGVYVKTTAFEHGIYIDAWKS PIFFPSLSTKWDDGSGEGTIDIPLQRLDQLEDIVLRITLATKKMGKKLVL GTVIVGGDQAGDTGSEQMRLIRESPPGQRVAAWHCYH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24016-PA | 492 | GF24016-PA | 1..492 | 1..487 | 2105 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13827-PA | 484 | GG13827-PA | 1..484 | 1..487 | 2258 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16062-PA | 480 | GH16062-PA | 1..480 | 1..487 | 1599 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10660-PC | 487 | CG10660-PC | 1..487 | 1..487 | 2526 | 100 | Plus |
CG10660-PA | 487 | CG10660-PA | 1..487 | 1..487 | 2526 | 100 | Plus |
CG10660-PD | 480 | CG10660-PD | 1..480 | 1..487 | 2468 | 98.6 | Plus |
CG10660-PB | 480 | CG10660-PB | 1..480 | 1..487 | 2468 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12325-PA | 490 | GI12325-PA | 1..490 | 1..487 | 1667 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24951-PA | 492 | GL24951-PA | 1..492 | 1..487 | 1780 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10475-PA | 492 | GA10475-PA | 1..492 | 1..487 | 1771 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24652-PA | 485 | GM24652-PA | 1..485 | 1..487 | 2504 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12716-PA | 485 | GD12716-PA | 1..485 | 1..487 | 2508 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13263-PA | 485 | GJ13263-PA | 1..485 | 1..487 | 1610 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12626-PA | 530 | GK12626-PA | 1..530 | 1..487 | 1633 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20118-PA | 483 | GE20118-PA | 1..483 | 1..487 | 2385 | 94.9 | Plus |